RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	FGG	P02679	453 aa		11.5	□□□□□ -0.57
SPIDR-222	ENST00000524006	C4BPA	P04003	597 aa	Known RBP	11.5	□□□□□ -0.57
SPIDR-222	ENST00000524006	CYP1A2	P05177	515 aa		11.5	□□□□□ -0.57
SPIDR-222	ENST00000524006	ZNF286B	P0CG31	522 aa		11.5	□□□□□ -0.57
SPIDR-222	ENST00000524006	P4HA1	P13674	534 aa		11.5	□□□□□ -0.57
SPIDR-222	ENST00000524006	CHRNB2	P17787	502 aa		11.5	□□□□□ -0.57
SPIDR-222	ENST00000524006	CETN2	P41208	172 aa		11.5	□□□□□ -0.57
SPIDR-222	ENST00000524006	MCL1	Q07820	350 aa		11.5	□□□□□ -0.57
SPIDR-222	ENST00000524006	PPFIA1	Q13136	1202 aa		11.5	□□□□□ -0.57
SPIDR-222	ENST00000524006	SGSM1	Q2NKQ1	1148 aa		11.5	□□□□□ -0.57
SPIDR-222	ENST00000524006	ZNF792	Q3KQV3	632 aa		11.5	□□□□□ -0.57
SPIDR-222	ENST00000524006	ODF2	Q5BJF6	829 aa		11.5	□□□□□ -0.57
SPIDR-222	ENST00000524006	NAA35	Q5VZE5	725 aa		11.5	□□□□□ -0.57
SPIDR-222	ENST00000524006	PALB2	Q86YC2	1186 aa		11.5	□□□□□ -0.57
SPIDR-222	ENST00000524006	THNSL1	Q8IYQ7	743 aa		11.5	□□□□□ -0.57
SPIDR-222	ENST00000524006	RASGEF1C	Q8N431	466 aa		11.5	□□□□□ -0.57
SPIDR-222	ENST00000524006	AEN	Q8WTP8	325 aa	Known RBP	11.5	□□□□□ -0.57
SPIDR-222	ENST00000524006	MAIP1	Q8WWC4	291 aa		11.5	□□□□□ -0.57
SPIDR-222	ENST00000524006	NLRP7	Q8WX94	980 aa		11.5	□□□□□ -0.57
SPIDR-222	ENST00000524006	ARMC5	Q96C12	935 aa		11.5	□□□□□ -0.57
SPIDR-222	ENST00000524006	ZSWIM1	Q9BR11	485 aa		11.5	□□□□□ -0.57
SPIDR-222	ENST00000524006	AP1M1	Q9BXS5	423 aa		11.5	□□□□□ -0.57
SPIDR-222	ENST00000524006	MTMR12	Q9C0I1	747 aa		11.5	□□□□□ -0.57
SPIDR-222	ENST00000524006	MRPL47	Q9HD33	250 aa	Known RBP	11.5	□□□□□ -0.57
SPIDR-222	ENST00000524006	AVEN	Q9NQS1	362 aa	Predicted RBP	11.5	□□□□□ -0.57
SPIDR-222	ENST00000524006	PDGFC	Q9NRA1	345 aa		11.5	□□□□□ -0.57
SPIDR-222	ENST00000524006	VPS18	Q9P253	973 aa		11.5	□□□□□ -0.57
SPIDR-222	ENST00000524006	LCMT1	Q9UIC8	334 aa		11.5	□□□□□ -0.57
SPIDR-222	ENST00000524006	ANAPC7	Q9UJX3	599 aa		11.5	□□□□□ -0.57
SPIDR-222	ENST00000524006	HPCAL4	Q9UM19	191 aa		11.5	□□□□□ -0.57
SPIDR-222	ENST00000524006	ADGRA2	Q96PE1	1338 aa		11.5	□□□□□ -0.57
SPIDR-222	ENST00000524006	TRIP12	Q14669	1992 aa	Predicted RBP	11.49	□□□□□ -0.57
SPIDR-222	ENST00000524006	DOCK3	Q8IZD9	2030 aa		11.49	□□□□□ -0.57
SPIDR-222	ENST00000524006	IGKV6-21	A0A0C4DH24	114 aa		11.49	□□□□□ -0.57
SPIDR-222	ENST00000524006	SLC15A5	A6NIM6	579 aa		11.49	□□□□□ -0.57
SPIDR-222	ENST00000524006	RAD51C	O43502	376 aa		11.49	□□□□□ -0.57
SPIDR-222	ENST00000524006	MED7	O43513	233 aa		11.49	□□□□□ -0.57
SPIDR-222	ENST00000524006	MSC	O60682	206 aa		11.49	□□□□□ -0.57
SPIDR-222	ENST00000524006	C22orf31	O95567	290 aa		11.49	□□□□□ -0.57
SPIDR-222	ENST00000524006	KRT19	P08727	400 aa		11.49	□□□□□ -0.57
SPIDR-222	ENST00000524006	MCF2	P10911	925 aa		11.49	□□□□□ -0.57
SPIDR-222	ENST00000524006	COMT	P21964	271 aa		11.49	□□□□□ -0.57
SPIDR-222	ENST00000524006	GBP1	P32455	592 aa		11.49	□□□□□ -0.57
SPIDR-222	ENST00000524006	SSR1	P43307	286 aa	Known RBP	11.49	□□□□□ -0.57
SPIDR-222	ENST00000524006	PTEN	P60484	403 aa		11.49	□□□□□ -0.57
SPIDR-222	ENST00000524006	SP3	Q02447	781 aa		11.49	□□□□□ -0.57
SPIDR-222	ENST00000524006	MKRN4P	Q13434	485 aa	Predicted RBP	11.49	□□□□□ -0.57
SPIDR-222	ENST00000524006	DRP2	Q13474	957 aa		11.49	□□□□□ -0.57
SPIDR-222	ENST00000524006	DGKD	Q16760	1214 aa		11.49	□□□□□ -0.57
SPIDR-222	ENST00000524006	FAM110C	Q1W6H9	321 aa		11.49	□□□□□ -0.57
SPIDR-222	ENST00000524006	SEZ6	Q53EL9	994 aa		11.49	□□□□□ -0.57
SPIDR-222	ENST00000524006	ZBTB41	Q5SVQ8	909 aa		11.49	□□□□□ -0.57
SPIDR-222	ENST00000524006	CFAP58	Q5T655	872 aa		11.49	□□□□□ -0.57
SPIDR-222	ENST00000524006	SPOPL	Q6IQ16	392 aa		11.49	□□□□□ -0.57
SPIDR-222	ENST00000524006	TSHZ1	Q6ZSZ6	1077 aa		11.49	□□□□□ -0.57
SPIDR-222	ENST00000524006	GPR142	Q7Z601	462 aa		11.49	□□□□□ -0.57
SPIDR-222	ENST00000524006	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	11.49	□□□□□ -0.57
SPIDR-222	ENST00000524006	AFG1L	Q8WV93	481 aa		11.49	□□□□□ -0.57
SPIDR-222	ENST00000524006	BRI3BP	Q8WY22	251 aa		11.49	□□□□□ -0.57
SPIDR-222	ENST00000524006	ZNF516	Q92618	1163 aa		11.49	□□□□□ -0.57
SPIDR-222	ENST00000524006	CAVIN3	Q969G5	261 aa		11.49	□□□□□ -0.57
SPIDR-222	ENST00000524006	LRRC45	Q96CN5	670 aa		11.49	□□□□□ -0.57
SPIDR-222	ENST00000524006	GDAP1L1	Q96MZ0	367 aa		11.49	□□□□□ -0.57
SPIDR-222	ENST00000524006	PCDHB18P	Q96TA0	734 aa		11.49	□□□□□ -0.57
SPIDR-222	ENST00000524006	FAM114A2	Q9NRY5	505 aa		11.49	□□□□□ -0.57
SPIDR-222	ENST00000524006	TNFSF13B	Q9Y275	285 aa		11.49	□□□□□ -0.57
SPIDR-222	ENST00000524006	ALG6	Q9Y672	507 aa		11.49	□□□□□ -0.57
SPIDR-222	ENST00000524006	CNTNAP2	Q9UHC6	1331 aa		11.49	□□□□□ -0.57
SPIDR-222	ENST00000524006	ZBTB42	B2RXF5	422 aa		11.48	□□□□□ -0.57
SPIDR-222	ENST00000524006	DDX3Y	O15523	660 aa	Known RBP	11.48	□□□□□ -0.57
SPIDR-222	ENST00000524006	VNN1	O95497	513 aa		11.48	□□□□□ -0.57
SPIDR-222	ENST00000524006	CALB1	P05937	261 aa		11.48	□□□□□ -0.57
SPIDR-222	ENST00000524006	INSRR	P14616	1297 aa		11.48	□□□□□ -0.57
SPIDR-222	ENST00000524006	CD58	P19256	250 aa		11.48	□□□□□ -0.57
SPIDR-222	ENST00000524006	EN2	P19622	333 aa	Predicted RBP	11.48	□□□□□ -0.57
SPIDR-222	ENST00000524006	CTNNA2	P26232	953 aa		11.48	□□□□□ -0.57
SPIDR-222	ENST00000524006	TNFSF9	P41273	254 aa		11.48	□□□□□ -0.57
SPIDR-222	ENST00000524006	ADCYAP1R1	P41586	468 aa		11.48	□□□□□ -0.57
SPIDR-222	ENST00000524006	SLC1A1	P43005	524 aa		11.48	□□□□□ -0.57
SPIDR-222	ENST00000524006	RWDD2B	P57060	319 aa		11.48	□□□□□ -0.57
SPIDR-222	ENST00000524006	OSTN	P61366	133 aa		11.48	□□□□□ -0.57
SPIDR-222	ENST00000524006	MRPS25	P82663	173 aa	Known RBP	11.48	□□□□□ -0.57
SPIDR-222	ENST00000524006	DR1	Q01658	176 aa		11.48	□□□□□ -0.57
SPIDR-222	ENST00000524006	MBTD1	Q05BQ5	628 aa		11.48	□□□□□ -0.57
SPIDR-222	ENST00000524006	ZNF211	Q13398	564 aa	Predicted RBP	11.48	□□□□□ -0.57
SPIDR-222	ENST00000524006	MTMR3	Q13615	1198 aa		11.48	□□□□□ -0.57
SPIDR-222	ENST00000524006	DHX34	Q14147	1143 aa	Known RBP	11.48	□□□□□ -0.57
SPIDR-222	ENST00000524006	ZNF667	Q5HYK9	610 aa		11.48	□□□□□ -0.57
SPIDR-222	ENST00000524006	ZFYVE27	Q5T4F4	411 aa		11.48	□□□□□ -0.57
SPIDR-222	ENST00000524006	ALS2CL	Q60I27	953 aa		11.48	□□□□□ -0.57
SPIDR-222	ENST00000524006	CRELD2	Q6UXH1	353 aa	Predicted RBP	11.48	□□□□□ -0.57
SPIDR-222	ENST00000524006	SCARA5	Q6ZMJ2	495 aa		11.48	□□□□□ -0.57
SPIDR-222	ENST00000524006	PASD1	Q8IV76	773 aa		11.48	□□□□□ -0.57
SPIDR-222	ENST00000524006	OR5B17	Q8NGF7	314 aa		11.48	□□□□□ -0.57
SPIDR-222	ENST00000524006	OLIG1	Q8TAK6	271 aa		11.48	□□□□□ -0.57
SPIDR-222	ENST00000524006	EMID1	Q96A84	441 aa	Predicted RBP	11.48	□□□□□ -0.57
SPIDR-222	ENST00000524006	ZNF668	Q96K58	619 aa	Predicted RBP	11.48	□□□□□ -0.57
SPIDR-222	ENST00000524006	PPP1R16B	Q96T49	567 aa		11.48	□□□□□ -0.57
SPIDR-222	ENST00000524006	C11orf70	Q9BRQ4	267 aa		11.48	□□□□□ -0.57
SPIDR-222	ENST00000524006	NFKBIZ	Q9BYH8	718 aa		11.48	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms