RNA–Protein interactions for RNA: ENST00000523961.5

CCNC-216, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-216ENST00000523961 RTP2Q5QGT7 225 aa13.56□□□□□ -0.24
CCNC-216ENST00000523961 LLGL2Q6P1M3 1020 aa13.56□□□□□ -0.24
CCNC-216ENST00000523961 CBWD2Q8IUF1 395 aa13.56□□□□□ -0.24
CCNC-216ENST00000523961 SLC9A9Q8IVB4 645 aa13.56□□□□□ -0.24
CCNC-216ENST00000523961 EFCAB13Q8IY85 973 aa13.56□□□□□ -0.24
CCNC-216ENST00000523961 VN1R2Q8NFZ6 395 aa13.56□□□□□ -0.24
CCNC-216ENST00000523961 TMEM174Q8WUU8 243 aa13.56□□□□□ -0.24
CCNC-216ENST00000523961 SUSD3Q96L08 255 aa13.56□□□□□ -0.24
CCNC-216ENST00000523961 PDE11AQ9HCR9 933 aa13.56□□□□□ -0.24
CCNC-216ENST00000523961 DPP3Q9NY33 737 aa13.56□□□□□ -0.24
CCNC-216ENST00000523961 PRUNE2Q8WUY3 3088 aa13.55□□□□□ -0.24
CCNC-216ENST00000523961 ANO9A1A5B4 782 aa13.55□□□□□ -0.24
CCNC-216ENST00000523961 I3L4J1 428 aa13.55□□□□□ -0.24
CCNC-216ENST00000523961 PIRO00625 290 aa13.55□□□□□ -0.24
CCNC-216ENST00000523961 C1RP00736 705 aa13.55□□□□□ -0.24
CCNC-216ENST00000523961 HOXB8P17481 243 aaPredicted RBP13.55□□□□□ -0.24
CCNC-216ENST00000523961 TKTP29401 623 aaKnown RBP13.55□□□□□ -0.24
CCNC-216ENST00000523961 WNT7BP56706 349 aa13.55□□□□□ -0.24
CCNC-216ENST00000523961 PSMD5Q16401 504 aa13.55□□□□□ -0.24
CCNC-216ENST00000523961 TJAP1Q5JTD0 557 aa13.55□□□□□ -0.24
CCNC-216ENST00000523961 ZNF658Q5TYW1 1059 aaPredicted RBP13.55□□□□□ -0.24
CCNC-216ENST00000523961 C9orf57Q5W0N0 161 aa13.55□□□□□ -0.24
CCNC-216ENST00000523961 PRSS55Q6UWB4 352 aaPredicted RBP13.55□□□□□ -0.24
CCNC-216ENST00000523961 ANKS3Q6ZW76 656 aa13.55□□□□□ -0.24
CCNC-216ENST00000523961 RDH13Q8NBN7 331 aa13.55□□□□□ -0.24
CCNC-216ENST00000523961 LNX1Q8TBB1 728 aaPredicted RBP13.55□□□□□ -0.24
CCNC-216ENST00000523961 SLC22A17Q8WUG5 538 aa13.55□□□□□ -0.24
CCNC-216ENST00000523961 ERCC4Q92889 916 aaPredicted RBP13.55□□□□□ -0.24
CCNC-216ENST00000523961 MSLNLQ96KJ4 702 aa13.55□□□□□ -0.24
CCNC-216ENST00000523961 DMAC2Q9NW81 257 aa13.55□□□□□ -0.24
CCNC-216ENST00000523961 CLEC1BQ9P126 229 aa13.55□□□□□ -0.24
CCNC-216ENST00000523961 CD207Q9UJ71 328 aa13.55□□□□□ -0.24
CCNC-216ENST00000523961 BARX2Q9UMQ3 279 aaPredicted RBP13.55□□□□□ -0.24
CCNC-216ENST00000523961 MAPK8IP1Q9UQF2 711 aa13.55□□□□□ -0.24
CCNC-216ENST00000523961 TRAF3IP3Q9Y228 551 aa13.55□□□□□ -0.24
CCNC-216ENST00000523961 FAM50BQ9Y247 325 aa13.55□□□□□ -0.24
CCNC-216ENST00000523961 EYSQ5T1H1 3165 aa13.55□□□□□ -0.24
CCNC-216ENST00000523961 GLUD1P00367 558 aa13.54□□□□□ -0.24
CCNC-216ENST00000523961 NR3C1P04150 777 aa13.54□□□□□ -0.24
CCNC-216ENST00000523961 TMEM191BP0C7N4 346 aa13.54□□□□□ -0.24
CCNC-216ENST00000523961 AARSP49588 968 aaKnown RBP eCLIP13.54□□□□□ -0.24
CCNC-216ENST00000523961 KCNQ1P51787 676 aa13.54□□□□□ -0.24
CCNC-216ENST00000523961 CLCN4P51793 760 aa13.54□□□□□ -0.24
CCNC-216ENST00000523961 RBM10P98175 930 aaKnown RBP13.54□□□□□ -0.24
CCNC-216ENST00000523961 CYP24A1Q07973 514 aa13.54□□□□□ -0.24
CCNC-216ENST00000523961 PSMD6Q15008 389 aa13.54□□□□□ -0.24
CCNC-216ENST00000523961 NFIL3Q16649 462 aa13.54□□□□□ -0.24
CCNC-216ENST00000523961 COBLL1Q53SF7 1204 aa13.54□□□□□ -0.24
CCNC-216ENST00000523961 ANKRD54Q6NXT1 300 aa13.54□□□□□ -0.24
CCNC-216ENST00000523961 ELMSAN1Q6PJG2 1045 aa13.54□□□□□ -0.24
CCNC-216ENST00000523961 TMEM130Q8N3G9 435 aa13.54□□□□□ -0.24
CCNC-216ENST00000523961 PIP4P2Q8N4L2 257 aa13.54□□□□□ -0.24
CCNC-216ENST00000523961 APPL2Q8NEU8 664 aa13.54□□□□□ -0.24
CCNC-216ENST00000523961 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.54□□□□□ -0.24
CCNC-216ENST00000523961 ANKRD36BP1Q96IX9 119 aa13.54□□□□□ -0.24
CCNC-216ENST00000523961 FNBP1Q96RU3 617 aa13.54□□□□□ -0.24
CCNC-216ENST00000523961 INTS13Q9NVM9 706 aa13.54□□□□□ -0.24
CCNC-216ENST00000523961 DZANK1Q9NVP4 752 aa13.54□□□□□ -0.24
CCNC-216ENST00000523961 DPP7Q9UHL4 492 aa13.54□□□□□ -0.24
CCNC-216ENST00000523961 PCDHB8Q9UN66 801 aa13.54□□□□□ -0.24
CCNC-216ENST00000523961 ANK1P16157 1881 aa13.53□□□□□ -0.24
CCNC-216ENST00000523961 ARHGEF37A1IGU5 675 aa13.53□□□□□ -0.24
CCNC-216ENST00000523961 GOLGA6L22H0YM25 854 aa13.53□□□□□ -0.24
CCNC-216ENST00000523961 H7C4K7 107 aa13.53□□□□□ -0.24
CCNC-216ENST00000523961 M0QZQ0 153 aa13.53□□□□□ -0.24
CCNC-216ENST00000523961 PPEF2O14830 753 aa13.53□□□□□ -0.24
CCNC-216ENST00000523961 TNNC2P02585 160 aa13.53□□□□□ -0.24
CCNC-216ENST00000523961 BMP1P13497 986 aa13.53□□□□□ -0.24
CCNC-216ENST00000523961 EPCAMP16422 314 aa13.53□□□□□ -0.24
CCNC-216ENST00000523961 RPL17P18621 184 aaKnown RBP13.53□□□□□ -0.24
CCNC-216ENST00000523961 RPL13P26373 211 aaKnown RBP13.53□□□□□ -0.24
CCNC-216ENST00000523961 PNPLA4P41247 253 aa13.53□□□□□ -0.24
CCNC-216ENST00000523961 PRCPP42785 496 aa13.53□□□□□ -0.24
CCNC-216ENST00000523961 TAF6P49848 677 aa13.53□□□□□ -0.24
CCNC-216ENST00000523961 LILRA4P59901 499 aa13.53□□□□□ -0.24
CCNC-216ENST00000523961 SMAD4Q13485 552 aaKnown RBP13.53□□□□□ -0.24
CCNC-216ENST00000523961 CLUL1Q15846 466 aa13.53□□□□□ -0.24
CCNC-216ENST00000523961 DUOXA2Q1HG44 320 aa13.53□□□□□ -0.24
CCNC-216ENST00000523961 PTCRAQ6ISU1 281 aaPredicted RBP13.53□□□□□ -0.24
CCNC-216ENST00000523961 DSTYKQ6XUX3 929 aa13.53□□□□□ -0.24
CCNC-216ENST00000523961 WDR49Q8IV35 697 aa13.53□□□□□ -0.24
CCNC-216ENST00000523961 SMYD4Q8IYR2 804 aaPredicted RBP13.53□□□□□ -0.24
CCNC-216ENST00000523961 C1orf127Q8N9H9 656 aa13.53□□□□□ -0.24
CCNC-216ENST00000523961 SMRP1Q8NCR6 262 aa13.53□□□□□ -0.24
CCNC-216ENST00000523961 MFSD14AQ96MC6 490 aa13.53□□□□□ -0.24
CCNC-216ENST00000523961 ZNF560Q96MR9 790 aa13.53□□□□□ -0.24
CCNC-216ENST00000523961 CLSTN3Q9BQT9 956 aa13.53□□□□□ -0.24
CCNC-216ENST00000523961 MTRRQ9UBK8 725 aa13.53□□□□□ -0.24
CCNC-216ENST00000523961 MAN1B1Q9UKM7 699 aa13.53□□□□□ -0.24
CCNC-216ENST00000523961 ITGA11Q9UKX5 1188 aa13.53□□□□□ -0.24
CCNC-216ENST00000523961 FRMD4BQ9Y2L6 1034 aa13.53□□□□□ -0.24
CCNC-216ENST00000523961 R3HCC1Q9Y3T6 440 aaKnown RBP13.53□□□□□ -0.24
CCNC-216ENST00000523961 BACE2Q9Y5Z0 518 aa13.53□□□□□ -0.24
CCNC-216ENST00000523961 REV3LO60673 3130 aa13.53□□□□□ -0.24
CCNC-216ENST00000523961 GRXCR2A6NFK2 248 aa13.52□□□□□ -0.25
CCNC-216ENST00000523961 SPDYE4A6NLX3 237 aa13.52□□□□□ -0.25
CCNC-216ENST00000523961 MBTPS2O43462 519 aa13.52□□□□□ -0.25
CCNC-216ENST00000523961 ITGB3P05106 788 aa13.52□□□□□ -0.25
CCNC-216ENST00000523961 DLATP10515 647 aaKnown RBP13.52□□□□□ -0.25
CCNC-216ENST00000523961 TNNI1P19237 187 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms