RNA–Protein interactions for RNA: ENST00000523588.1

CPNE3-207, Transcript of copine 3, humanhuman

TSL 2

Gene CPNE3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-207ENST00000523588 TYRP14679 529 aa7□□□□□ -1.29
CPNE3-207ENST00000523588 SMARCA1P28370 1054 aa7□□□□□ -1.29
CPNE3-207ENST00000523588 PRDX5P30044 214 aa7□□□□□ -1.29
CPNE3-207ENST00000523588 NKX6-1P78426 367 aaPredicted RBP7□□□□□ -1.29
CPNE3-207ENST00000523588 OCA2Q04671 838 aa7□□□□□ -1.29
CPNE3-207ENST00000523588 SPATA31D4Q6ZUB0 917 aa7□□□□□ -1.29
CPNE3-207ENST00000523588 ZNF365Q70YC5 407 aa7□□□□□ -1.29
CPNE3-207ENST00000523588 MRGPREQ86SM8 312 aa7□□□□□ -1.29
CPNE3-207ENST00000523588 MAPKAPK5Q8IW41 473 aa7□□□□□ -1.29
CPNE3-207ENST00000523588 MAGEB6Q8N7X4 407 aa7□□□□□ -1.29
CPNE3-207ENST00000523588 HAS1Q92839 578 aa7□□□□□ -1.29
CPNE3-207ENST00000523588 TSR2Q969E8 191 aaKnown RBP7□□□□□ -1.29
CPNE3-207ENST00000523588 RUNDC1Q96C34 613 aa7□□□□□ -1.29
CPNE3-207ENST00000523588 MYEOVQ96EZ4 313 aa7□□□□□ -1.29
CPNE3-207ENST00000523588 MARS2Q96GW9 593 aaKnown RBP7□□□□□ -1.29
CPNE3-207ENST00000523588 CGRRF1Q99675 332 aa7□□□□□ -1.29
CPNE3-207ENST00000523588 ZSWIM1Q9BR11 485 aa7□□□□□ -1.29
CPNE3-207ENST00000523588 REXO4Q9GZR2 422 aaKnown RBP7□□□□□ -1.29
CPNE3-207ENST00000523588 NRDE2Q9H7Z3 1164 aa7□□□□□ -1.29
CPNE3-207ENST00000523588 LMBRD1Q9NUN5 540 aa7□□□□□ -1.29
CPNE3-207ENST00000523588 ABCF2Q9UG63 623 aa7□□□□□ -1.29
CPNE3-207ENST00000523588 NR2E3Q9Y5X4 410 aa7□□□□□ -1.29
CPNE3-207ENST00000523588 AATKQ6ZMQ8 1374 aa6.99□□□□□ -1.29
CPNE3-207ENST00000523588 H3BML4 177 aa6.99□□□□□ -1.29
CPNE3-207ENST00000523588 ZNF202O95125 648 aa6.99□□□□□ -1.29
CPNE3-207ENST00000523588 NDUFA10O95299 355 aa6.99□□□□□ -1.29
CPNE3-207ENST00000523588 LAG3P18627 525 aa6.99□□□□□ -1.29
CPNE3-207ENST00000523588 FGFR4P22455 802 aa6.99□□□□□ -1.29
CPNE3-207ENST00000523588 PTGS2P35354 604 aa6.99□□□□□ -1.29
CPNE3-207ENST00000523588 BMPR1AP36894 532 aa6.99□□□□□ -1.29
CPNE3-207ENST00000523588 CCDC93Q567U6 631 aa6.99□□□□□ -1.29
CPNE3-207ENST00000523588 B3GNTL1Q67FW5 361 aaPredicted RBP6.99□□□□□ -1.29
CPNE3-207ENST00000523588 TMEM132CQ8N3T6 1108 aa6.99□□□□□ -1.29
CPNE3-207ENST00000523588 ACO2Q99798 780 aaKnown RBP6.99□□□□□ -1.29
CPNE3-207ENST00000523588 ADAM2Q99965 735 aa6.99□□□□□ -1.29
CPNE3-207ENST00000523588 C1orf43Q9BWL3 253 aa6.99□□□□□ -1.29
CPNE3-207ENST00000523588 RNPEPQ9H4A4 650 aa6.99□□□□□ -1.29
CPNE3-207ENST00000523588 WDCPQ9H6R7 721 aa6.99□□□□□ -1.29
CPNE3-207ENST00000523588 HSFX1Q9UBD0 423 aa6.99□□□□□ -1.29
CPNE3-207ENST00000523588 GABBR1Q9UBS5 961 aa6.99□□□□□ -1.29
CPNE3-207ENST00000523588 USP25Q9UHP3 1055 aa6.99□□□□□ -1.29
CPNE3-207ENST00000523588 MAP3K2Q9Y2U5 619 aa6.99□□□□□ -1.29
CPNE3-207ENST00000523588 U2AF1L5P0DN76 240 aaPredicted RBP6.98□□□□□ -1.29
CPNE3-207ENST00000523588 FCER1AP12319 257 aa6.98□□□□□ -1.29
CPNE3-207ENST00000523588 U2AF1Q01081 240 aaKnown RBP eCLIP6.98□□□□□ -1.29
CPNE3-207ENST00000523588 PLS1Q14651 629 aa6.98□□□□□ -1.29
CPNE3-207ENST00000523588 MLC1Q15049 377 aa6.98□□□□□ -1.29
CPNE3-207ENST00000523588 DENND1CQ8IV53 801 aa6.98□□□□□ -1.29
CPNE3-207ENST00000523588 TMIEQ8NEW7 156 aa6.98□□□□□ -1.29
CPNE3-207ENST00000523588 PLBD2Q8NHP8 589 aa6.98□□□□□ -1.29
CPNE3-207ENST00000523588 PPP1R35Q8TAP8 253 aa6.98□□□□□ -1.29
CPNE3-207ENST00000523588 FAM167AQ96KS9 214 aa6.98□□□□□ -1.29
CPNE3-207ENST00000523588 KLHL32Q96NJ5 620 aa6.98□□□□□ -1.29
CPNE3-207ENST00000523588 LRFN3Q9BTN0 628 aa6.98□□□□□ -1.29
CPNE3-207ENST00000523588 TLR10Q9BXR5 811 aa6.98□□□□□ -1.29
CPNE3-207ENST00000523588 MRPL46Q9H2W6 279 aaKnown RBP6.98□□□□□ -1.29
CPNE3-207ENST00000523588 PNPOQ9NVS9 261 aa6.98□□□□□ -1.29
CPNE3-207ENST00000523588 VSX1Q9NZR4 365 aaPredicted RBP6.98□□□□□ -1.29
CPNE3-207ENST00000523588 REXO2Q9Y3B8 237 aaKnown RBP6.98□□□□□ -1.29
CPNE3-207ENST00000523588 CENPVL1A0A0U1RR11 272 aa6.97□□□□□ -1.29
CPNE3-207ENST00000523588 LPXNO60711 386 aa6.97□□□□□ -1.29
CPNE3-207ENST00000523588 FZD7O75084 574 aa6.97□□□□□ -1.29
CPNE3-207ENST00000523588 MATN4O95460 622 aa6.97□□□□□ -1.29
CPNE3-207ENST00000523588 ACVRL1P37023 503 aa6.97□□□□□ -1.29
CPNE3-207ENST00000523588 HSD11B2P80365 405 aa6.97□□□□□ -1.29
CPNE3-207ENST00000523588 TIGD2Q4W5G0 525 aa6.97□□□□□ -1.29
CPNE3-207ENST00000523588 PPP1R3BQ86XI6 285 aa6.97□□□□□ -1.29
CPNE3-207ENST00000523588 SYNE4Q8N205 404 aa6.97□□□□□ -1.29
CPNE3-207ENST00000523588 SH2D3CQ8N5H7 860 aa6.97□□□□□ -1.29
CPNE3-207ENST00000523588 CPEB3Q8NE35 698 aaKnown RBP6.97□□□□□ -1.29
CPNE3-207ENST00000523588 KLHDC4Q8TBB5 520 aa6.97□□□□□ -1.29
CPNE3-207ENST00000523588 CDK5RAP3Q96JB5 506 aa6.97□□□□□ -1.29
CPNE3-207ENST00000523588 PNKPQ96T60 521 aa6.97□□□□□ -1.29
CPNE3-207ENST00000523588 MLST8Q9BVC4 326 aa6.97□□□□□ -1.29
CPNE3-207ENST00000523588 GNL3LQ9NVN8 582 aaKnown RBP6.97□□□□□ -1.29
CPNE3-207ENST00000523588 STXBP5LQ9Y2K9 1186 aa6.97□□□□□ -1.29
CPNE3-207ENST00000523588 HS3ST3A1Q9Y663 406 aa6.97□□□□□ -1.29
CPNE3-207ENST00000523588 UBXN7O94888 489 aa6.96□□□□□ -1.3
CPNE3-207ENST00000523588 MAKP20794 623 aa6.96□□□□□ -1.3
CPNE3-207ENST00000523588 IL12RB1P42701 662 aa6.96□□□□□ -1.3
CPNE3-207ENST00000523588 PIK3CGP48736 1102 aa6.96□□□□□ -1.3
CPNE3-207ENST00000523588 RESTQ13127 1097 aa6.96□□□□□ -1.3
CPNE3-207ENST00000523588 KIF22Q14807 665 aa6.96□□□□□ -1.3
CPNE3-207ENST00000523588 MINDY4Q4G0A6 757 aa6.96□□□□□ -1.3
CPNE3-207ENST00000523588 PDSS2Q86YH6 399 aa6.96□□□□□ -1.3
CPNE3-207ENST00000523588 MYO1HQ8N1T3 1032 aa6.96□□□□□ -1.3
CPNE3-207ENST00000523588 CAMKK1Q8N5S9 505 aa6.96□□□□□ -1.3
CPNE3-207ENST00000523588 Q8NA96 180 aa6.96□□□□□ -1.3
CPNE3-207ENST00000523588 ZBTB34Q8NCN2 500 aa6.96□□□□□ -1.3
CPNE3-207ENST00000523588 NACC2Q96BF6 587 aa6.96□□□□□ -1.3
CPNE3-207ENST00000523588 KRTAP4-5Q9BYR2 181 aa6.96□□□□□ -1.3
CPNE3-207ENST00000523588 BRD9Q9H8M2 597 aa6.96□□□□□ -1.3
CPNE3-207ENST00000523588 RLIMQ9NVW2 624 aa6.96□□□□□ -1.3
CPNE3-207ENST00000523588 FEZ2Q9UHY8 353 aaPredicted RBP6.96□□□□□ -1.3
CPNE3-207ENST00000523588 A0A088AWK7 358 aa6.95□□□□□ -1.3
CPNE3-207ENST00000523588 E9PLN8 166 aa6.95□□□□□ -1.3
CPNE3-207ENST00000523588 H3BUI4 141 aa6.95□□□□□ -1.3
CPNE3-207ENST00000523588 B3GALT2O43825 422 aa6.95□□□□□ -1.3
CPNE3-207ENST00000523588 PPFIA4O75335 1185 aa6.95□□□□□ -1.3
CPNE3-207ENST00000523588 ZFPL1O95159 310 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms