RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 NFKBIZQ9BYH8 718 aa12.8□□□□□ -0.36
SDCBP-211ENST00000523441 ASAH2Q9NR71 780 aa12.8□□□□□ -0.36
SDCBP-211ENST00000523441 ANKEF1Q9NU02 776 aa12.8□□□□□ -0.36
SDCBP-211ENST00000523441 POLR3BQ9NW08 1133 aaPredicted RBP12.8□□□□□ -0.36
SDCBP-211ENST00000523441 GTSE1Q9NYZ3 720 aa12.8□□□□□ -0.36
SDCBP-211ENST00000523441 CEP72Q9P209 647 aa12.8□□□□□ -0.36
SDCBP-211ENST00000523441 PCDHA12Q9UN75 941 aa12.8□□□□□ -0.36
SDCBP-211ENST00000523441 NUB1Q9Y5A7 615 aa12.8□□□□□ -0.36
SDCBP-211ENST00000523441 ZMYM2Q9UBW7 1377 aa12.8□□□□□ -0.36
SDCBP-211ENST00000523441 A0A1W2PRU2 124 aa12.79□□□□□ -0.36
SDCBP-211ENST00000523441 SPECC1L-ADORA2AF8WAN1 911 aa12.79□□□□□ -0.36
SDCBP-211ENST00000523441 EXTL3O43909 919 aa12.79□□□□□ -0.36
SDCBP-211ENST00000523441 MOSPD3O75425 235 aa12.79□□□□□ -0.36
SDCBP-211ENST00000523441 RPP40O75818 363 aaKnown RBP12.79□□□□□ -0.36
SDCBP-211ENST00000523441 TOP3BO95985 862 aaKnown RBP12.79□□□□□ -0.36
SDCBP-211ENST00000523441 HARSP12081 509 aaKnown RBP12.79□□□□□ -0.36
SDCBP-211ENST00000523441 CNR2P34972 360 aa12.79□□□□□ -0.36
SDCBP-211ENST00000523441 RBM25P49756 843 aaKnown RBP12.79□□□□□ -0.36
SDCBP-211ENST00000523441 TOB2Q14106 344 aaPredicted RBP12.79□□□□□ -0.36
SDCBP-211ENST00000523441 CALCRLQ16602 461 aa12.79□□□□□ -0.36
SDCBP-211ENST00000523441 MAPK6Q16659 721 aa12.79□□□□□ -0.36
SDCBP-211ENST00000523441 UPP1Q16831 310 aa12.79□□□□□ -0.36
SDCBP-211ENST00000523441 RNF43Q68DV7 783 aa12.79□□□□□ -0.36
SDCBP-211ENST00000523441 GALNT17Q6IS24 598 aa12.79□□□□□ -0.36
SDCBP-211ENST00000523441 CPLX2Q6PUV4 134 aaKnown RBP12.79□□□□□ -0.36
SDCBP-211ENST00000523441 UNQ6494/PRO21346Q6UXR6 183 aa12.79□□□□□ -0.36
SDCBP-211ENST00000523441 TMEM130Q8N3G9 435 aa12.79□□□□□ -0.36
SDCBP-211ENST00000523441 CEP120Q8N960 986 aa12.79□□□□□ -0.36
SDCBP-211ENST00000523441 DEPTORQ8TB45 409 aa12.79□□□□□ -0.36
SDCBP-211ENST00000523441 DEPDC1BQ8WUY9 529 aa12.79□□□□□ -0.36
SDCBP-211ENST00000523441 PRIMPOLQ96LW4 560 aa12.79□□□□□ -0.36
SDCBP-211ENST00000523441 PGLYRP2Q96PD5 576 aa12.79□□□□□ -0.36
SDCBP-211ENST00000523441 PPP1R10Q96QC0 940 aaKnown RBP12.79□□□□□ -0.36
SDCBP-211ENST00000523441 FZD8Q9H461 694 aa12.79□□□□□ -0.36
SDCBP-211ENST00000523441 TTC12Q9H892 705 aaPredicted RBP12.79□□□□□ -0.36
SDCBP-211ENST00000523441 AVENQ9NQS1 362 aaPredicted RBP12.79□□□□□ -0.36
SDCBP-211ENST00000523441 FBXL5Q9UKA1 691 aa12.79□□□□□ -0.36
SDCBP-211ENST00000523441 ZFYVE26Q68DK2 2539 aa12.78□□□□□ -0.36
SDCBP-211ENST00000523441 PODXLO00592 558 aa12.78□□□□□ -0.36
SDCBP-211ENST00000523441 DPYSL4O14531 572 aa12.78□□□□□ -0.36
SDCBP-211ENST00000523441 ABLIM3O94929 683 aa12.78□□□□□ -0.36
SDCBP-211ENST00000523441 ATF2P15336 505 aa12.78□□□□□ -0.36
SDCBP-211ENST00000523441 PSMA5P28066 241 aa12.78□□□□□ -0.36
SDCBP-211ENST00000523441 NOVA1P51513 510 aaKnown RBP12.78□□□□□ -0.36
SDCBP-211ENST00000523441 NR5A1Q13285 461 aa12.78□□□□□ -0.36
SDCBP-211ENST00000523441 BMP2KLQ5H9B9 411 aa12.78□□□□□ -0.36
SDCBP-211ENST00000523441 PKN3Q6P5Z2 889 aa12.78□□□□□ -0.36
SDCBP-211ENST00000523441 TCEAL8Q8IYN2 117 aa12.78□□□□□ -0.36
SDCBP-211ENST00000523441 SHKBP1Q8TBC3 707 aa12.78□□□□□ -0.36
SDCBP-211ENST00000523441 IGF2RP11717 2491 aa12.78□□□□□ -0.36
SDCBP-211ENST00000523441 CITO14578 2027 aa12.78□□□□□ -0.36
SDCBP-211ENST00000523441 SMIM28A0A1B0GU29 152 aa12.77□□□□□ -0.37
SDCBP-211ENST00000523441 H7C4K7 107 aa12.77□□□□□ -0.37
SDCBP-211ENST00000523441 TMEM189-UBE2V1I3L0A0 370 aa12.77□□□□□ -0.37
SDCBP-211ENST00000523441 FOXD2O60548 495 aaPredicted RBP12.77□□□□□ -0.37
SDCBP-211ENST00000523441 OR4Q2P0C623 313 aa12.77□□□□□ -0.37
SDCBP-211ENST00000523441 ZNF806P0C7X5 589 aa12.77□□□□□ -0.37
SDCBP-211ENST00000523441 MCM4P33991 863 aa12.77□□□□□ -0.37
SDCBP-211ENST00000523441 HSPA4P34932 840 aa12.77□□□□□ -0.37
SDCBP-211ENST00000523441 MPLP40238 635 aa12.77□□□□□ -0.37
SDCBP-211ENST00000523441 YARSP54577 528 aaKnown RBP12.77□□□□□ -0.37
SDCBP-211ENST00000523441 SHC2P98077 582 aa12.77□□□□□ -0.37
SDCBP-211ENST00000523441 TNK2Q07912 1038 aa12.77□□□□□ -0.37
SDCBP-211ENST00000523441 ACAP1Q15027 740 aa12.77□□□□□ -0.37
SDCBP-211ENST00000523441 ATF7IP2Q5U623 682 aa12.77□□□□□ -0.37
SDCBP-211ENST00000523441 CDCA2Q69YH5 1023 aaPredicted RBP12.77□□□□□ -0.37
SDCBP-211ENST00000523441 SLC8B1Q6J4K2 584 aa12.77□□□□□ -0.37
SDCBP-211ENST00000523441 KIAA1211LQ6NV74 962 aa12.77□□□□□ -0.37
SDCBP-211ENST00000523441 RNF19BQ6ZMZ0 732 aa12.77□□□□□ -0.37
SDCBP-211ENST00000523441 MAMSTRQ6ZN01 415 aa12.77□□□□□ -0.37
SDCBP-211ENST00000523441 RTL10Q7L3V2 364 aa12.77□□□□□ -0.37
SDCBP-211ENST00000523441 CACNA2D4Q7Z3S7 1137 aa12.77□□□□□ -0.37
SDCBP-211ENST00000523441 WDR5BQ86VZ2 330 aa12.77□□□□□ -0.37
SDCBP-211ENST00000523441 C18orf25Q96B23 403 aaPredicted RBP12.77□□□□□ -0.37
SDCBP-211ENST00000523441 UROC1Q96N76 676 aa12.77□□□□□ -0.37
SDCBP-211ENST00000523441 NAP1L4Q99733 375 aaKnown RBP12.77□□□□□ -0.37
SDCBP-211ENST00000523441 HSD17B14Q9BPX1 270 aa12.77□□□□□ -0.37
SDCBP-211ENST00000523441 AGXT2Q9BYV1 514 aa12.77□□□□□ -0.37
SDCBP-211ENST00000523441 C2orf40Q9H1Z8 148 aa12.77□□□□□ -0.37
SDCBP-211ENST00000523441 INVSQ9Y283 1065 aa12.77□□□□□ -0.37
SDCBP-211ENST00000523441 TIMM13Q9Y5L4 95 aaPredicted RBP12.77□□□□□ -0.37
SDCBP-211ENST00000523441 ASPMQ8IZT6 3477 aa12.77□□□□□ -0.37
SDCBP-211ENST00000523441 AKAP13Q12802 2813 aa12.77□□□□□ -0.37
SDCBP-211ENST00000523441 NUP210Q8TEM1 1887 aaPredicted RBP12.76□□□□□ -0.37
SDCBP-211ENST00000523441 ZNF638Q14966 1978 aaKnown RBP12.76□□□□□ -0.37
SDCBP-211ENST00000523441 C4orf47A7E2U8 309 aa12.76□□□□□ -0.37
SDCBP-211ENST00000523441 ARNTLO00327 626 aa12.76□□□□□ -0.37
SDCBP-211ENST00000523441 ACKR2O00590 384 aa12.76□□□□□ -0.37
SDCBP-211ENST00000523441 TM4SF5O14894 197 aa12.76□□□□□ -0.37
SDCBP-211ENST00000523441 EPN2O95208 641 aa12.76□□□□□ -0.37
SDCBP-211ENST00000523441 XBP1P17861 261 aa12.76□□□□□ -0.37
SDCBP-211ENST00000523441 CTHP32929 405 aa12.76□□□□□ -0.37
SDCBP-211ENST00000523441 CREB5Q02930 508 aa12.76□□□□□ -0.37
SDCBP-211ENST00000523441 ZNF252P-AS1Q0IIN9 211 aa12.76□□□□□ -0.37
SDCBP-211ENST00000523441 FAM187BQ17R55 369 aa12.76□□□□□ -0.37
SDCBP-211ENST00000523441 DCAF4L1Q3SXM0 396 aa12.76□□□□□ -0.37
SDCBP-211ENST00000523441 DGKKQ5KSL6 1271 aa12.76□□□□□ -0.37
SDCBP-211ENST00000523441 NT5DC1Q5TFE4 455 aa12.76□□□□□ -0.37
SDCBP-211ENST00000523441 RUFY3Q7L099 469 aa12.76□□□□□ -0.37
SDCBP-211ENST00000523441 TTC16Q8NEE8 873 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms