RNA–Protein interactions for RNA: ENST00000523430.5

SQLE-206, Transcript of squalene epoxidase, humanhuman

TSL 2 BASIC

Gene SQLE, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-206ENST00000523430 CTAGE15A4D2H0 777 aa22.27■■□□□ 1.16
SQLE-206ENST00000523430 PDE2AO00408 941 aaPredicted RBP22.27■■□□□ 1.16
SQLE-206ENST00000523430 ATMINO43313 823 aaPredicted RBP22.27■■□□□ 1.16
SQLE-206ENST00000523430 CTAGE8P0CG41 777 aa22.27■■□□□ 1.16
SQLE-206ENST00000523430 CD58P19256 250 aa22.27■■□□□ 1.16
SQLE-206ENST00000523430 POU5F1Q01860 360 aaKnown RBP22.27■■□□□ 1.16
SQLE-206ENST00000523430 NBPF20Q3BBV1 942 aa22.27■■□□□ 1.16
SQLE-206ENST00000523430 NOTUMQ6P988 496 aa22.27■■□□□ 1.16
SQLE-206ENST00000523430 SLC27A1Q6PCB7 646 aa22.27■■□□□ 1.16
SQLE-206ENST00000523430 CTAGE6Q86UF2 777 aa22.27■■□□□ 1.16
SQLE-206ENST00000523430 CTAGE4Q8IX94 777 aa22.27■■□□□ 1.16
SQLE-206ENST00000523430 CXorf38Q8TB03 319 aa22.27■■□□□ 1.16
SQLE-206ENST00000523430 CXCL16Q9H2A7 254 aa22.27■■□□□ 1.16
SQLE-206ENST00000523430 ASB7Q9H672 318 aa22.27■■□□□ 1.16
SQLE-206ENST00000523430 GTF2IRD1Q9UHL9 959 aa22.27■■□□□ 1.16
SQLE-206ENST00000523430 RALGAPA2Q2PPJ7 1873 aa22.27■■□□□ 1.16
SQLE-206ENST00000523430 MYCNP04198 464 aaPredicted RBP22.26■■□□□ 1.15
SQLE-206ENST00000523430 ITGB3P05106 788 aa22.26■■□□□ 1.15
SQLE-206ENST00000523430 GZMAP12544 262 aa22.26■■□□□ 1.15
SQLE-206ENST00000523430 GUCY2FP51841 1108 aa22.26■■□□□ 1.15
SQLE-206ENST00000523430 ZNF132P52740 706 aa22.26■■□□□ 1.15
SQLE-206ENST00000523430 TMEM132DQ14C87 1099 aa22.26■■□□□ 1.15
SQLE-206ENST00000523430 CREG2Q8IUH2 290 aa22.26■■□□□ 1.15
SQLE-206ENST00000523430 CFHR5Q9BXR6 569 aa22.26■■□□□ 1.15
SQLE-206ENST00000523430 SRRDQ9UH36 339 aa22.26■■□□□ 1.15
SQLE-206ENST00000523430 TSKSQ9UJT2 592 aa22.26■■□□□ 1.15
SQLE-206ENST00000523430 POLIQ9UNA4 740 aa22.26■■□□□ 1.15
SQLE-206ENST00000523430 PRLRP16471 622 aa22.26■■□□□ 1.15
SQLE-206ENST00000523430 TCP1P17987 556 aaKnown RBP22.26■■□□□ 1.15
SQLE-206ENST00000523430 GNA15P30679 374 aa22.26■■□□□ 1.15
SQLE-206ENST00000523430 NKX3-2P78367 333 aa22.26■■□□□ 1.15
SQLE-206ENST00000523430 CLEC16AQ2KHT3 1053 aa22.26■■□□□ 1.15
SQLE-206ENST00000523430 GDF6Q6KF10 455 aaPredicted RBP22.26■■□□□ 1.15
SQLE-206ENST00000523430 CAGE1Q8TC20 777 aa22.26■■□□□ 1.15
SQLE-206ENST00000523430 SNTG2Q9NY99 539 aa22.26■■□□□ 1.15
SQLE-206ENST00000523430 CHORDC1Q9UHD1 332 aaPredicted RBP22.26■■□□□ 1.15
SQLE-206ENST00000523430 PIN4Q9Y237 131 aaKnown RBP22.26■■□□□ 1.15
SQLE-206ENST00000523430 HES2Q9Y543 173 aa22.26■■□□□ 1.15
SQLE-206ENST00000523430 BRCA2P51587 3418 aa22.25■■□□□ 1.15
SQLE-206ENST00000523430 CFHP08603 1231 aa22.25■■□□□ 1.15
SQLE-206ENST00000523430 ZSCAN20P17040 1043 aaPredicted RBP22.25■■□□□ 1.15
SQLE-206ENST00000523430 BPIFB4P59827 614 aa22.25■■□□□ 1.15
SQLE-206ENST00000523430 CKAP4Q07065 602 aaKnown RBP22.25■■□□□ 1.15
SQLE-206ENST00000523430 PCBP1Q15365 356 aaKnown RBP eCLIP22.25■■□□□ 1.159e-7■■□□□ 12.7
SQLE-206ENST00000523430 ZNF677Q86XU0 584 aa22.25■■□□□ 1.15
SQLE-206ENST00000523430 NOA1Q8NC60 698 aaKnown RBP22.25■■□□□ 1.15
SQLE-206ENST00000523430 WNT8BQ93098 351 aa22.25■■□□□ 1.15
SQLE-206ENST00000523430 CCDC94Q9BW85 323 aaPredicted RBP22.25■■□□□ 1.15
SQLE-206ENST00000523430 NXF3Q9H4D5 531 aaKnown RBP22.25■■□□□ 1.15
SQLE-206ENST00000523430 CISHQ9NSE2 258 aa22.25■■□□□ 1.15
SQLE-206ENST00000523430 SMARCAL1Q9NZC9 954 aa22.25■■□□□ 1.15
SQLE-206ENST00000523430 EHD2Q9NZN4 543 aa22.25■■□□□ 1.15
SQLE-206ENST00000523430 NXF1Q9UBU9 619 aaKnown RBP22.25■■□□□ 1.15
SQLE-206ENST00000523430 BUB1BO60566 1050 aaPredicted RBP22.24■■□□□ 1.15
SQLE-206ENST00000523430 WEE2P0C1S8 567 aa22.24■■□□□ 1.15
SQLE-206ENST00000523430 SSTR3P32745 418 aaPredicted RBP22.24■■□□□ 1.15
SQLE-206ENST00000523430 CRYBB1P53674 252 aaPredicted RBP22.24■■□□□ 1.15
SQLE-206ENST00000523430 FAM47CQ5HY64 1035 aa22.24■■□□□ 1.15
SQLE-206ENST00000523430 TAF2Q6P1X5 1199 aa22.24■■□□□ 1.15
SQLE-206ENST00000523430 SLFN11Q7Z7L1 901 aa22.24■■□□□ 1.15
SQLE-206ENST00000523430 DAAM2Q86T65 1068 aa22.24■■□□□ 1.15
SQLE-206ENST00000523430 C2CD2Q9Y426 696 aa22.24■■□□□ 1.15
SQLE-206ENST00000523430 ASGR1P07306 291 aa22.24■■□□□ 1.15
SQLE-206ENST00000523430 UNGP13051 313 aaPredicted RBP22.24■■□□□ 1.15
SQLE-206ENST00000523430 POLR2BP30876 1174 aaKnown RBP22.24■■□□□ 1.15
SQLE-206ENST00000523430 RAP1GAPP47736 663 aa22.24■■□□□ 1.15
SQLE-206ENST00000523430 GPC5P78333 572 aa22.24■■□□□ 1.15
SQLE-206ENST00000523430 PASD1Q8IV76 773 aa22.24■■□□□ 1.15
SQLE-206ENST00000523430 KIF12Q96FN5 646 aa22.24■■□□□ 1.15
SQLE-206ENST00000523430 SNX27Q96L92 541 aa22.24■■□□□ 1.15
SQLE-206ENST00000523430 ACAD10Q6JQN1 1059 aa22.23■■□□□ 1.15
SQLE-206ENST00000523430 APBB1IPQ7Z5R6 666 aaPredicted RBP22.23■■□□□ 1.15
SQLE-206ENST00000523430 NME8Q8N427 588 aa22.23■■□□□ 1.15
SQLE-206ENST00000523430 RABGGTAQ92696 567 aa22.23■■□□□ 1.15
SQLE-206ENST00000523430 ZNF653Q96CK0 615 aa22.23■■□□□ 1.15
SQLE-206ENST00000523430 CTTNBP2NLQ9P2B4 639 aa22.23■■□□□ 1.15
SQLE-206ENST00000523430 CITO14578 2027 aa22.23■■□□□ 1.15
SQLE-206ENST00000523430 THAP12O43422 761 aa22.22■■□□□ 1.15
SQLE-206ENST00000523430 HMGCRP04035 888 aa22.22■■□□□ 1.15
SQLE-206ENST00000523430 KCNA10Q16322 511 aa22.22■■□□□ 1.15
SQLE-206ENST00000523430 ZNF394Q53GI3 561 aa22.22■■□□□ 1.15
SQLE-206ENST00000523430 NAA35Q5VZE5 725 aa22.22■■□□□ 1.15
SQLE-206ENST00000523430 FBXO38Q6PIJ6 1188 aa22.22■■□□□ 1.15
SQLE-206ENST00000523430 RHOT2Q8IXI1 618 aa22.22■■□□□ 1.15
SQLE-206ENST00000523430 KLHDC9Q8NEP7 349 aa22.22■■□□□ 1.15
SQLE-206ENST00000523430 TAF4BQ92750 862 aa22.22■■□□□ 1.15
SQLE-206ENST00000523430 STXBP5LQ9Y2K9 1186 aa22.22■■□□□ 1.15
SQLE-206ENST00000523430 DNAH12Q6ZR08 3092 aa22.22■■□□□ 1.15
SQLE-206ENST00000523430 KIF4AO95239 1232 aa22.22■■□□□ 1.15
SQLE-206ENST00000523430 CYP1A1P04798 512 aaPredicted RBP22.22■■□□□ 1.15
SQLE-206ENST00000523430 AXLP30530 894 aa22.22■■□□□ 1.15
SQLE-206ENST00000523430 VEGFBP49765 207 aa22.22■■□□□ 1.15
SQLE-206ENST00000523430 MRPS6P82932 125 aaKnown RBP22.22■■□□□ 1.15
SQLE-206ENST00000523430 HTRA3P83110 453 aa22.22■■□□□ 1.15
SQLE-206ENST00000523430 RPS6KA1Q15418 735 aa22.22■■□□□ 1.15
SQLE-206ENST00000523430 WDR72Q3MJ13 1102 aa22.22■■□□□ 1.15
SQLE-206ENST00000523430 ZNF667Q5HYK9 610 aa22.22■■□□□ 1.15
SQLE-206ENST00000523430 UBXN11Q5T124 520 aa22.22■■□□□ 1.15
SQLE-206ENST00000523430 MAP3K21Q5TCX8 1036 aa22.22■■□□□ 1.15
SQLE-206ENST00000523430 CCSAPQ6IQ19 270 aaPredicted RBP22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms