RNA–Protein interactions for RNA: ENST00000523298.5

CTNNA1-238, Transcript of catenin alpha 1, human

TSL 2

Gene CTNNA1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-238	ENST00000523298	ZNF365	Q70YC5	407 aa		5.73	□□□□□ -1.49
CTNNA1-238	ENST00000523298	HTR3D	Q70Z44	454 aa		5.73	□□□□□ -1.49
CTNNA1-238	ENST00000523298	UBE2Q2	Q8WVN8	375 aa		5.73	□□□□□ -1.49
CTNNA1-238	ENST00000523298	ATXN2L	Q8WWM7	1075 aa	Known RBP	5.73	□□□□□ -1.49
CTNNA1-238	ENST00000523298	LRIG1	Q96JA1	1093 aa		5.73	□□□□□ -1.49
CTNNA1-238	ENST00000523298	PHACTR3	Q96KR7	559 aa		5.73	□□□□□ -1.49
CTNNA1-238	ENST00000523298	FAM167A	Q96KS9	214 aa		5.73	□□□□□ -1.49
CTNNA1-238	ENST00000523298	MPHOSPH9	Q99550	1183 aa		5.73	□□□□□ -1.49
CTNNA1-238	ENST00000523298	KRTAP9-9	Q9BYP9	154 aa		5.73	□□□□□ -1.49
CTNNA1-238	ENST00000523298	KRTAP9-4	Q9BYQ2	154 aa		5.73	□□□□□ -1.49
CTNNA1-238	ENST00000523298	KRTAP3-1	Q9BYR8	98 aa		5.73	□□□□□ -1.49
CTNNA1-238	ENST00000523298	FAM30A	Q9NZY2	134 aa		5.73	□□□□□ -1.49
CTNNA1-238	ENST00000523298	JKAMP	Q9P055	326 aa		5.73	□□□□□ -1.49
CTNNA1-238	ENST00000523298	CPNE7	Q9UBL6	633 aa		5.73	□□□□□ -1.49
CTNNA1-238	ENST00000523298	PHTF1	Q9UMS5	762 aa		5.73	□□□□□ -1.49
CTNNA1-238	ENST00000523298	ANO9	A1A5B4	782 aa		5.72	□□□□□ -1.49
CTNNA1-238	ENST00000523298	CAPN14	A8MX76	684 aa		5.72	□□□□□ -1.49
CTNNA1-238	ENST00000523298	PRR5-ARHGAP8	B1AHC4	643 aa		5.72	□□□□□ -1.49
CTNNA1-238	ENST00000523298	PHGDH	O43175	533 aa	Known RBP	5.72	□□□□□ -1.49
CTNNA1-238	ENST00000523298	AGFG2	O95081	481 aa		5.72	□□□□□ -1.49
CTNNA1-238	ENST00000523298	POMC	P01189	267 aa		5.72	□□□□□ -1.49
CTNNA1-238	ENST00000523298	COMT	P21964	271 aa		5.72	□□□□□ -1.49
CTNNA1-238	ENST00000523298	APOBEC3A	P31941	199 aa	Predicted RBP	5.72	□□□□□ -1.49
CTNNA1-238	ENST00000523298	ALDH5A1	P51649	535 aa	Predicted RBP	5.72	□□□□□ -1.49
CTNNA1-238	ENST00000523298	PSMC1	P62191	440 aa	Known RBP	5.72	□□□□□ -1.49
CTNNA1-238	ENST00000523298	GPSM2	P81274	684 aa		5.72	□□□□□ -1.49
CTNNA1-238	ENST00000523298	CREM	Q03060	361 aa		5.72	□□□□□ -1.49
CTNNA1-238	ENST00000523298	R3HDM1	Q15032	1099 aa	Known RBP	5.72	□□□□□ -1.49
CTNNA1-238	ENST00000523298	FAM102A	Q5T9C2	384 aa	Predicted RBP	5.72	□□□□□ -1.49
CTNNA1-238	ENST00000523298	EMC10	Q5UCC4	262 aa		5.72	□□□□□ -1.49
CTNNA1-238	ENST00000523298	PPP4R4	Q6NUP7	873 aa		5.72	□□□□□ -1.49
CTNNA1-238	ENST00000523298	DRICH1	Q6PGQ1	229 aa	Predicted RBP	5.72	□□□□□ -1.49
CTNNA1-238	ENST00000523298	MED25	Q71SY5	747 aa		5.72	□□□□□ -1.49
CTNNA1-238	ENST00000523298	SESTD1	Q86VW0	696 aa		5.72	□□□□□ -1.49
CTNNA1-238	ENST00000523298	PMM1	Q92871	262 aa		5.72	□□□□□ -1.49
CTNNA1-238	ENST00000523298	MIEF2	Q96C03	454 aa		5.72	□□□□□ -1.49
CTNNA1-238	ENST00000523298	APIP	Q96GX9	242 aa		5.72	□□□□□ -1.49
CTNNA1-238	ENST00000523298	TBCB	Q99426	244 aa		5.72	□□□□□ -1.49
CTNNA1-238	ENST00000523298	MNT	Q99583	582 aa		5.72	□□□□□ -1.49
CTNNA1-238	ENST00000523298	TRIM54	Q9BYV2	358 aa		5.72	□□□□□ -1.49
CTNNA1-238	ENST00000523298	SMURF2	Q9HAU4	748 aa		5.72	□□□□□ -1.49
CTNNA1-238	ENST00000523298	SIDT1	Q9NXL6	827 aa	Known RBP	5.72	□□□□□ -1.49
CTNNA1-238	ENST00000523298	USP25	Q9UHP3	1055 aa		5.72	□□□□□ -1.49
CTNNA1-238	ENST00000523298	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	5.72	□□□□□ -1.49
CTNNA1-238	ENST00000523298	FRS3	O43559	492 aa		5.71	□□□□□ -1.5
CTNNA1-238	ENST00000523298	HAUS5	O94927	633 aa		5.71	□□□□□ -1.5
CTNNA1-238	ENST00000523298	AMH	P03971	560 aa		5.71	□□□□□ -1.5
CTNNA1-238	ENST00000523298	MTHFD1	P11586	935 aa	Known RBP	5.71	□□□□□ -1.5
CTNNA1-238	ENST00000523298	FCER1A	P12319	257 aa		5.71	□□□□□ -1.5
CTNNA1-238	ENST00000523298	PHKG2	P15735	406 aa		5.71	□□□□□ -1.5
CTNNA1-238	ENST00000523298	ZFP36	P26651	326 aa	Known RBP	5.71	□□□□□ -1.5
CTNNA1-238	ENST00000523298	SLC7A1	P30825	629 aa		5.71	□□□□□ -1.5
CTNNA1-238	ENST00000523298	PRIM2	P49643	509 aa		5.71	□□□□□ -1.5
CTNNA1-238	ENST00000523298	BOP1	Q14137	746 aa	Known RBP	5.71	□□□□□ -1.5
CTNNA1-238	ENST00000523298	POLD3	Q15054	466 aa	Predicted RBP	5.71	□□□□□ -1.5
CTNNA1-238	ENST00000523298	CDSN	Q15517	529 aa		5.71	□□□□□ -1.5
CTNNA1-238	ENST00000523298	EFCAB12	Q6NXP0	572 aa		5.71	□□□□□ -1.5
CTNNA1-238	ENST00000523298	ZNF585A	Q6P3V2	769 aa		5.71	□□□□□ -1.5
CTNNA1-238	ENST00000523298	SGMS1	Q86VZ5	419 aa		5.71	□□□□□ -1.5
CTNNA1-238	ENST00000523298	SKAP1	Q86WV1	359 aa		5.71	□□□□□ -1.5
CTNNA1-238	ENST00000523298	KRT78	Q8N1N4	520 aa		5.71	□□□□□ -1.5
CTNNA1-238	ENST00000523298	PCSK9	Q8NBP7	692 aa	Known RBP	5.71	□□□□□ -1.5
CTNNA1-238	ENST00000523298	TBC1D15	Q8TC07	691 aa		5.71	□□□□□ -1.5
CTNNA1-238	ENST00000523298	PACSIN1	Q9BY11	444 aa		5.71	□□□□□ -1.5
CTNNA1-238	ENST00000523298	HSFX1	Q9UBD0	423 aa		5.71	□□□□□ -1.5
CTNNA1-238	ENST00000523298	HDAC5	Q9UQL6	1122 aa		5.71	□□□□□ -1.5
CTNNA1-238	ENST00000523298	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	5.71	□□□□□ -1.5
CTNNA1-238	ENST00000523298	AATK	Q6ZMQ8	1374 aa		5.7	□□□□□ -1.5
CTNNA1-238	ENST00000523298		A0A1W2PPL8	197 aa		5.7	□□□□□ -1.5
CTNNA1-238	ENST00000523298	ZNF785	A8K8V0	405 aa		5.7	□□□□□ -1.5
CTNNA1-238	ENST00000523298	AHRR	A9YTQ3	701 aa		5.7	□□□□□ -1.5
CTNNA1-238	ENST00000523298	TMEM233	B4DJY2	109 aa		5.7	□□□□□ -1.5
CTNNA1-238	ENST00000523298	KPNA5	O15131	536 aa		5.7	□□□□□ -1.5
CTNNA1-238	ENST00000523298	MFAP3L	O75121	409 aa		5.7	□□□□□ -1.5
CTNNA1-238	ENST00000523298	ELANE	P08246	267 aa		5.7	□□□□□ -1.5
CTNNA1-238	ENST00000523298	TM4SF4	P48230	202 aa		5.7	□□□□□ -1.5
CTNNA1-238	ENST00000523298	TOB1	P50616	345 aa	Predicted RBP	5.7	□□□□□ -1.5
CTNNA1-238	ENST00000523298	CACNB3	P54284	484 aa		5.7	□□□□□ -1.5
CTNNA1-238	ENST00000523298	SUMO3	P55854	103 aa	Predicted RBP	5.7	□□□□□ -1.5
CTNNA1-238	ENST00000523298	FAM189B	P81408	668 aa		5.7	□□□□□ -1.5
CTNNA1-238	ENST00000523298	FMO1	Q01740	532 aa		5.7	□□□□□ -1.5
CTNNA1-238	ENST00000523298	NHLH2	Q02577	135 aa		5.7	□□□□□ -1.5
CTNNA1-238	ENST00000523298	FZD5	Q13467	585 aa		5.7	□□□□□ -1.5
CTNNA1-238	ENST00000523298	RRP1B	Q14684	758 aa	Known RBP	5.7	□□□□□ -1.5
CTNNA1-238	ENST00000523298	C3orf38	Q5JPI3	329 aa		5.7	□□□□□ -1.5
CTNNA1-238	ENST00000523298	NAIF1	Q69YI7	327 aa	Predicted RBP	5.7	□□□□□ -1.5
CTNNA1-238	ENST00000523298	LRRC55	Q6ZSA7	311 aa		5.7	□□□□□ -1.5
CTNNA1-238	ENST00000523298	NSUN7	Q8NE18	718 aa	Known RBP	5.7	□□□□□ -1.5
CTNNA1-238	ENST00000523298	ZFP28	Q8NHY6	868 aa		5.7	□□□□□ -1.5
CTNNA1-238	ENST00000523298	BRIX1	Q8TDN6	353 aa	Known RBP	5.7	□□□□□ -1.5
CTNNA1-238	ENST00000523298	MARS2	Q96GW9	593 aa	Known RBP	5.7	□□□□□ -1.5
CTNNA1-238	ENST00000523298	STRBP	Q96SI9	672 aa	Known RBP	5.7	□□□□□ -1.5
CTNNA1-238	ENST00000523298	ZSWIM1	Q9BR11	485 aa		5.7	□□□□□ -1.5
CTNNA1-238	ENST00000523298	DPH1	Q9BZG8	443 aa		5.7	□□□□□ -1.5
CTNNA1-238	ENST00000523298	ZNF768	Q9H5H4	540 aa	Known RBP	5.7	□□□□□ -1.5
CTNNA1-238	ENST00000523298	GPR35	Q9HC97	309 aa		5.7	□□□□□ -1.5
CTNNA1-238	ENST00000523298	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	5.7	□□□□□ -1.5
CTNNA1-238	ENST00000523298	POGK	Q9P215	609 aa		5.7	□□□□□ -1.5
CTNNA1-238	ENST00000523298	COL20A1	Q9P218	1284 aa		5.7	□□□□□ -1.5
CTNNA1-238	ENST00000523298	CORO2B	Q9UQ03	480 aa		5.7	□□□□□ -1.5

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