RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 IL27RAQ6UWB1 636 aa4.47□□□□□ -1.69
SKP1-209ENST00000522552 CEP68Q76N32 757 aa4.47□□□□□ -1.69
SKP1-209ENST00000522552 CCDC91Q7Z6B0 441 aa4.47□□□□□ -1.69
SKP1-209ENST00000522552 PRPF39Q86UA1 669 aaKnown RBP4.47□□□□□ -1.69
SKP1-209ENST00000522552 RTKN2Q8IZC4 609 aa4.47□□□□□ -1.69
SKP1-209ENST00000522552 NLGN4XQ8N0W4 816 aa4.47□□□□□ -1.69
SKP1-209ENST00000522552 LZTR1Q8N653 840 aa4.47□□□□□ -1.69
SKP1-209ENST00000522552 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.47□□□□□ -1.69
SKP1-209ENST00000522552 KCTD6Q8NC69 237 aa4.47□□□□□ -1.69
SKP1-209ENST00000522552 LSM14AQ8ND56 463 aaKnown RBP4.47□□□□□ -1.69
SKP1-209ENST00000522552 OR14C36Q8NHC7 312 aa4.47□□□□□ -1.69
SKP1-209ENST00000522552 PIP4K2CQ8TBX8 421 aa4.47□□□□□ -1.69
SKP1-209ENST00000522552 CSGALNACT1Q8TDX6 532 aa4.47□□□□□ -1.69
SKP1-209ENST00000522552 MAML1Q92585 1016 aa4.47□□□□□ -1.69
SKP1-209ENST00000522552 RAB24Q969Q5 203 aa4.47□□□□□ -1.69
SKP1-209ENST00000522552 JAKMIP2Q96AA8 810 aa4.47□□□□□ -1.69
SKP1-209ENST00000522552 RNF125Q96EQ8 232 aa4.47□□□□□ -1.69
SKP1-209ENST00000522552 Q96M66 194 aa4.47□□□□□ -1.69
SKP1-209ENST00000522552 TUBGCP5Q96RT8 1024 aa4.47□□□□□ -1.69
SKP1-209ENST00000522552 P2RX7Q99572 595 aaKnown RBP4.47□□□□□ -1.69
SKP1-209ENST00000522552 PRPF18Q99633 342 aaKnown RBP4.47□□□□□ -1.69
SKP1-209ENST00000522552 VRK1Q99986 396 aaPredicted RBP4.47□□□□□ -1.69
SKP1-209ENST00000522552 ADI1Q9BV57 179 aa4.47□□□□□ -1.69
SKP1-209ENST00000522552 ITPAQ9BY32 194 aa4.47□□□□□ -1.69
SKP1-209ENST00000522552 PABPC3Q9H361 631 aaKnown RBP4.47□□□□□ -1.69
SKP1-209ENST00000522552 GSX1Q9H4S2 264 aaPredicted RBP4.47□□□□□ -1.69
SKP1-209ENST00000522552 TAF1DQ9H5J8 278 aaPredicted RBP4.47□□□□□ -1.69
SKP1-209ENST00000522552 EPS8L2Q9H6S3 715 aa4.47□□□□□ -1.69
SKP1-209ENST00000522552 INCENPQ9NQS7 918 aa4.47□□□□□ -1.69
SKP1-209ENST00000522552 CNNM1Q9NRU3 951 aa4.47□□□□□ -1.69
SKP1-209ENST00000522552 FAM105AQ9NUU6 356 aa4.47□□□□□ -1.69
SKP1-209ENST00000522552 PIH1D1Q9NWS0 290 aaKnown RBP4.47□□□□□ -1.69
SKP1-209ENST00000522552 RGL1Q9NZL6 768 aa4.47□□□□□ -1.69
SKP1-209ENST00000522552 ADGRE2Q9UHX3 823 aa4.47□□□□□ -1.69
SKP1-209ENST00000522552 TBX20Q9UMR3 447 aa4.47□□□□□ -1.69
SKP1-209ENST00000522552 STARD13Q9Y3M8 1113 aa4.47□□□□□ -1.69
SKP1-209ENST00000522552 FLT1P17948 1338 aa4.47□□□□□ -1.69
SKP1-209ENST00000522552 PASKQ96RG2 1323 aa4.47□□□□□ -1.69
SKP1-209ENST00000522552 LMTK3Q96Q04 1460 aa4.47□□□□□ -1.69
SKP1-209ENST00000522552 ABCC9O60706 1549 aa4.46□□□□□ -1.7
SKP1-209ENST00000522552 CNTNAP4Q9C0A0 1308 aa4.46□□□□□ -1.7
SKP1-209ENST00000522552 TRIM43BA6NCK2 446 aa4.46□□□□□ -1.7
SKP1-209ENST00000522552 NT5C1B-RDH14C9J2C7 533 aa4.46□□□□□ -1.7
SKP1-209ENST00000522552 GOLGA6L22H0YM25 854 aa4.46□□□□□ -1.7
SKP1-209ENST00000522552 H3BNC9 293 aa4.46□□□□□ -1.7
SKP1-209ENST00000522552 INO80B-WBP1J3KQ70 363 aa4.46□□□□□ -1.7
SKP1-209ENST00000522552 UBE2CO00762 179 aa4.46□□□□□ -1.7
SKP1-209ENST00000522552 FCHO1O14526 889 aa4.46□□□□□ -1.7
SKP1-209ENST00000522552 KIAA0355O15063 1070 aa4.46□□□□□ -1.7
SKP1-209ENST00000522552 FGF10O15520 208 aaPredicted RBP4.46□□□□□ -1.7
SKP1-209ENST00000522552 BUB1BO60566 1050 aaPredicted RBP4.46□□□□□ -1.7
SKP1-209ENST00000522552 ACTL6BO94805 426 aa4.46□□□□□ -1.7
SKP1-209ENST00000522552 TK1P04183 234 aa4.46□□□□□ -1.7
SKP1-209ENST00000522552 THEGLP0DJG4 465 aa4.46□□□□□ -1.7
SKP1-209ENST00000522552 CSH1P0DML2 217 aa4.46□□□□□ -1.7
SKP1-209ENST00000522552 CSH2P0DML3 217 aa4.46□□□□□ -1.7
SKP1-209ENST00000522552 NR2F1P10589 423 aa4.46□□□□□ -1.7
SKP1-209ENST00000522552 DESP17661 470 aa4.46□□□□□ -1.7
SKP1-209ENST00000522552 ATP5F1P24539 256 aaPredicted RBP4.46□□□□□ -1.7
SKP1-209ENST00000522552 FPR2P25090 351 aa4.46□□□□□ -1.7
SKP1-209ENST00000522552 ATP5DP30049 168 aa4.46□□□□□ -1.7
SKP1-209ENST00000522552 CD68P34810 354 aaPredicted RBP4.46□□□□□ -1.7
SKP1-209ENST00000522552 HNF4AP41235 474 aa4.46□□□□□ -1.7
SKP1-209ENST00000522552 DPP6P42658 865 aa4.46□□□□□ -1.7
SKP1-209ENST00000522552 ASPAP45381 313 aa4.46□□□□□ -1.7
SKP1-209ENST00000522552 FLT3LGP49771 235 aa4.46□□□□□ -1.7
SKP1-209ENST00000522552 ARFIP2P53365 341 aa4.46□□□□□ -1.7
SKP1-209ENST00000522552 MRPS35P82673 323 aaKnown RBP4.46□□□□□ -1.7
SKP1-209ENST00000522552 MC1RQ01726 317 aa4.46□□□□□ -1.7
SKP1-209ENST00000522552 PPARAQ07869 468 aa4.46□□□□□ -1.7
SKP1-209ENST00000522552 MGAT2Q10469 447 aa4.46□□□□□ -1.7
SKP1-209ENST00000522552 AP1B1Q10567 949 aa4.46□□□□□ -1.7
SKP1-209ENST00000522552 LRMPQ12912 555 aa4.46□□□□□ -1.7
SKP1-209ENST00000522552 TMEM266Q2M3C6 531 aa4.46□□□□□ -1.7
SKP1-209ENST00000522552 KHDC1Q4VXA5 237 aaKnown RBP4.46□□□□□ -1.7
SKP1-209ENST00000522552 KHDC1LQ5JSQ8 128 aa4.46□□□□□ -1.7
SKP1-209ENST00000522552 ARMC4Q5T2S8 1044 aa4.46□□□□□ -1.7
SKP1-209ENST00000522552 NAA16Q6N069 864 aaPredicted RBP4.46□□□□□ -1.7
SKP1-209ENST00000522552 LINC00114Q6XXX2 140 aa4.46□□□□□ -1.7
SKP1-209ENST00000522552 RAPH1Q70E73 1250 aa4.46□□□□□ -1.7
SKP1-209ENST00000522552 UNC13DQ70J99 1090 aa4.46□□□□□ -1.7
SKP1-209ENST00000522552 RNF44Q7L0R7 432 aa4.46□□□□□ -1.7
SKP1-209ENST00000522552 ANKRD13BQ86YJ7 626 aa4.46□□□□□ -1.7
SKP1-209ENST00000522552 GATAD2AQ86YP4 633 aa4.46□□□□□ -1.7
SKP1-209ENST00000522552 CCDC117Q8IWD4 279 aaPredicted RBP4.46□□□□□ -1.7
SKP1-209ENST00000522552 RHOT1Q8IXI2 618 aa4.46□□□□□ -1.7
SKP1-209ENST00000522552 SCAMP5Q8TAC9 235 aa4.46□□□□□ -1.7
SKP1-209ENST00000522552 TBC1D22AQ8WUA7 517 aa4.46□□□□□ -1.7
SKP1-209ENST00000522552 TRIM43Q96BQ3 446 aaPredicted RBP4.46□□□□□ -1.7
SKP1-209ENST00000522552 FOXRED1Q96CU9 486 aaPredicted RBP4.46□□□□□ -1.7
SKP1-209ENST00000522552 CLPTM1LQ96KA5 538 aa4.46□□□□□ -1.7
SKP1-209ENST00000522552 PTCHD1Q96NR3 888 aa4.46□□□□□ -1.7
SKP1-209ENST00000522552 C7orf25Q9BPX7 421 aa4.46□□□□□ -1.7
SKP1-209ENST00000522552 TRIM54Q9BYV2 358 aa4.46□□□□□ -1.7
SKP1-209ENST00000522552 GREM2Q9H772 168 aa4.46□□□□□ -1.7
SKP1-209ENST00000522552 SYNCQ9H7C4 482 aa4.46□□□□□ -1.7
SKP1-209ENST00000522552 CYP4F11Q9HBI6 524 aa4.46□□□□□ -1.7
SKP1-209ENST00000522552 SARS2Q9NP81 518 aaKnown RBP4.46□□□□□ -1.7
SKP1-209ENST00000522552 PRDM8Q9NQV8 689 aa4.46□□□□□ -1.7
SKP1-209ENST00000522552 SEPT11Q9NVA2 429 aaKnown RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms