RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 MYBP10242 640 aa17.09■□□□□ 0.33
PCDHA3-201ENST00000522353 UCHL3P15374 230 aa17.09■□□□□ 0.33
PCDHA3-201ENST00000522353 AKT1P31749 480 aa17.09■□□□□ 0.33
PCDHA3-201ENST00000522353 TDRD10Q5VZ19 366 aaKnown RBP17.09■□□□□ 0.33
PCDHA3-201ENST00000522353 ANKS3Q6ZW76 656 aa17.09■□□□□ 0.33
PCDHA3-201ENST00000522353 LRRC43Q8N309 656 aa17.09■□□□□ 0.33
PCDHA3-201ENST00000522353 ANTXR2P58335 489 aa17.09■□□□□ 0.33
PCDHA3-201ENST00000522353 SLC18A3Q16572 532 aa17.09■□□□□ 0.33
PCDHA3-201ENST00000522353 MMS22LQ6ZRQ5 1243 aa17.09■□□□□ 0.33
PCDHA3-201ENST00000522353 SYDE1Q6ZW31 735 aaPredicted RBP17.09■□□□□ 0.33
PCDHA3-201ENST00000522353 CHSY1Q86X52 802 aa17.09■□□□□ 0.33
PCDHA3-201ENST00000522353 HPS3Q969F9 1004 aa17.09■□□□□ 0.33
PCDHA3-201ENST00000522353 ELAC2Q9BQ52 826 aaKnown RBP17.09■□□□□ 0.33
PCDHA3-201ENST00000522353 TUBE1Q9UJT0 475 aa17.09■□□□□ 0.33
PCDHA3-201ENST00000522353 ITM2BQ9Y287 266 aa17.09■□□□□ 0.33
PCDHA3-201ENST00000522353 NFRKBQ6P4R8 1299 aa17.09■□□□□ 0.33
PCDHA3-201ENST00000522353 MOXD1Q6UVY6 613 aa17.09■□□□□ 0.33
PCDHA3-201ENST00000522353 RNPC3Q96LT9 517 aaKnown RBP17.09■□□□□ 0.33
PCDHA3-201ENST00000522353 VPS33BQ9H267 617 aa17.09■□□□□ 0.33
PCDHA3-201ENST00000522353 TMEM60Q9H2L4 133 aa17.09■□□□□ 0.33
PCDHA3-201ENST00000522353 PIK3R2O00459 728 aa17.09■□□□□ 0.33
PCDHA3-201ENST00000522353 KCNN4O15554 427 aa17.09■□□□□ 0.33
PCDHA3-201ENST00000522353 CYP2C8P10632 490 aa17.09■□□□□ 0.33
PCDHA3-201ENST00000522353 SLC2A3P11169 496 aa17.09■□□□□ 0.33
PCDHA3-201ENST00000522353 SFSWAPQ12872 951 aaKnown RBP17.09■□□□□ 0.33
PCDHA3-201ENST00000522353 DPYDQ12882 1025 aa17.09■□□□□ 0.33
PCDHA3-201ENST00000522353 ZNF677Q86XU0 584 aa17.09■□□□□ 0.33
PCDHA3-201ENST00000522353 SLC26A7Q8TE54 656 aa17.09■□□□□ 0.33
PCDHA3-201ENST00000522353 C1orf54Q8WWF1 131 aa17.09■□□□□ 0.33
PCDHA3-201ENST00000522353 TMX2Q9Y320 296 aa17.09■□□□□ 0.33
PCDHA3-201ENST00000522353 NFIAQ12857 509 aa17.08■□□□□ 0.33
PCDHA3-201ENST00000522353 HIF1AQ16665 826 aa17.08■□□□□ 0.33
PCDHA3-201ENST00000522353 CYP4A22Q5TCH4 519 aa17.08■□□□□ 0.33
PCDHA3-201ENST00000522353 MRPL46Q9H2W6 279 aaKnown RBP17.08■□□□□ 0.33
PCDHA3-201ENST00000522353 KDM4CQ9H3R0 1056 aa17.08■□□□□ 0.33
PCDHA3-201ENST00000522353 CXCL11O14625 94 aa17.08■□□□□ 0.33
PCDHA3-201ENST00000522353 DAGLBQ8NCG7 672 aa17.08■□□□□ 0.33
PCDHA3-201ENST00000522353 CASS4Q9NQ75 786 aa17.08■□□□□ 0.33
PCDHA3-201ENST00000522353 MTSS1O43312 755 aa17.08■□□□□ 0.32
PCDHA3-201ENST00000522353 STK4Q13043 487 aa17.08■□□□□ 0.32
PCDHA3-201ENST00000522353 C10orf120Q5SQS8 335 aa17.08■□□□□ 0.32
PCDHA3-201ENST00000522353 STARD7Q9NQZ5 370 aa17.08■□□□□ 0.32
PCDHA3-201ENST00000522353 SESN2P58004 480 aaPredicted RBP17.08■□□□□ 0.32
PCDHA3-201ENST00000522353 ZC2HC1CQ53FD0 456 aaPredicted RBP17.08■□□□□ 0.32
PCDHA3-201ENST00000522353 DHX40Q8IX18 779 aaKnown RBP17.08■□□□□ 0.32
PCDHA3-201ENST00000522353 KIRREL3Q8IZU9 778 aa17.08■□□□□ 0.32
PCDHA3-201ENST00000522353 CPA5Q8WXQ8 436 aa17.08■□□□□ 0.32
PCDHA3-201ENST00000522353 NRBF2Q96F24 287 aa17.08■□□□□ 0.32
PCDHA3-201ENST00000522353 GMCL1Q96IK5 515 aa17.08■□□□□ 0.32
PCDHA3-201ENST00000522353 ASPSCR1Q9BZE9 553 aa17.08■□□□□ 0.32
PCDHA3-201ENST00000522353 DPP7Q9UHL4 492 aa17.08■□□□□ 0.32
PCDHA3-201ENST00000522353 MYO3AQ8NEV4 1616 aa17.08■□□□□ 0.32
PCDHA3-201ENST00000522353 E2F6O75461 281 aa17.07■□□□□ 0.32
PCDHA3-201ENST00000522353 B3GAT3O94766 335 aa17.07■□□□□ 0.32
PCDHA3-201ENST00000522353 KCNA1Q09470 495 aa17.07■□□□□ 0.32
PCDHA3-201ENST00000522353 WASHC5Q12768 1159 aa17.07■□□□□ 0.32
PCDHA3-201ENST00000522353 PDK1Q15118 436 aa17.07■□□□□ 0.32
PCDHA3-201ENST00000522353 ZNF467Q7Z7K2 595 aaPredicted RBP17.07■□□□□ 0.32
PCDHA3-201ENST00000522353 RNF135Q8IUD6 432 aa17.07■□□□□ 0.32
PCDHA3-201ENST00000522353 SLC7A14Q8TBB6 771 aa17.07■□□□□ 0.32
PCDHA3-201ENST00000522353 TEKT4Q8WW24 435 aa17.07■□□□□ 0.32
PCDHA3-201ENST00000522353 SCOCQ9UIL1 159 aa17.07■□□□□ 0.32
PCDHA3-201ENST00000522353 LMNAP02545 664 aaKnown RBP17.07■□□□□ 0.32
PCDHA3-201ENST00000522353 IRF1P10914 325 aa17.07■□□□□ 0.32
PCDHA3-201ENST00000522353 KLRK1P26718 216 aa17.07■□□□□ 0.32
PCDHA3-201ENST00000522353 UCMAQ8WVF2 138 aa17.07■□□□□ 0.32
PCDHA3-201ENST00000522353 SYNDIG1Q9H7V2 258 aa17.07■□□□□ 0.32
PCDHA3-201ENST00000522353 OGTO15294 1046 aa17.07■□□□□ 0.32
PCDHA3-201ENST00000522353 KCNA2P16389 499 aa17.07■□□□□ 0.32
PCDHA3-201ENST00000522353 GUCY2CP25092 1073 aa17.07■□□□□ 0.32
PCDHA3-201ENST00000522353 TSPAN17Q96FV3 270 aa17.07■□□□□ 0.32
PCDHA3-201ENST00000522353 SPATA17Q96L03 361 aa17.07■□□□□ 0.32
PCDHA3-201ENST00000522353 TAF1DQ9H5J8 278 aaPredicted RBP17.07■□□□□ 0.32
PCDHA3-201ENST00000522353 COG4Q9H9E3 785 aa17.07■□□□□ 0.32
PCDHA3-201ENST00000522353 RGL2O15211 777 aa17.07■□□□□ 0.32
PCDHA3-201ENST00000522353 MRPS25P82663 173 aaKnown RBP17.07■□□□□ 0.32
PCDHA3-201ENST00000522353 TROAPQ12815 778 aa17.07■□□□□ 0.32
PCDHA3-201ENST00000522353 E2F5Q15329 346 aa17.07■□□□□ 0.32
PCDHA3-201ENST00000522353 NUDCD3Q8IVD9 361 aa17.07■□□□□ 0.32
PCDHA3-201ENST00000522353 SLC30A5Q8TAD4 765 aa17.07■□□□□ 0.32
PCDHA3-201ENST00000522353 MAD2L2Q9UI95 211 aa17.07■□□□□ 0.32
PCDHA3-201ENST00000522353 MSH4O15457 936 aa17.06■□□□□ 0.32
PCDHA3-201ENST00000522353 NCK2O43639 380 aa17.06■□□□□ 0.32
PCDHA3-201ENST00000522353 NDUFS3O75489 264 aa17.06■□□□□ 0.32
PCDHA3-201ENST00000522353 GFAPP14136 432 aa17.06■□□□□ 0.32
PCDHA3-201ENST00000522353 DCAF6Q58WW2 860 aa17.06■□□□□ 0.32
PCDHA3-201ENST00000522353 CATSPER3Q86XQ3 398 aa17.06■□□□□ 0.32
PCDHA3-201ENST00000522353 MCEEQ96PE7 176 aa17.06■□□□□ 0.32
PCDHA3-201ENST00000522353 TRIM4Q9C037 500 aa17.06■□□□□ 0.32
PCDHA3-201ENST00000522353 KDM1AO60341 852 aa17.06■□□□□ 0.32
PCDHA3-201ENST00000522353 EGFRP00533 1210 aa17.06■□□□□ 0.32
PCDHA3-201ENST00000522353 EEF1B2P24534 225 aaKnown RBP17.06■□□□□ 0.32
PCDHA3-201ENST00000522353 ATICP31939 592 aa17.06■□□□□ 0.32
PCDHA3-201ENST00000522353 ZBTB41Q5SVQ8 909 aa17.06■□□□□ 0.32
PCDHA3-201ENST00000522353 MRPS31Q92665 395 aaKnown RBP17.06■□□□□ 0.32
PCDHA3-201ENST00000522353 OPTNQ96CV9 577 aa17.06■□□□□ 0.32
PCDHA3-201ENST00000522353 ABI2Q9NYB9 513 aaPredicted RBP17.06■□□□□ 0.32
PCDHA3-201ENST00000522353 TBX20Q9UMR3 447 aa17.06■□□□□ 0.32
PCDHA3-201ENST00000522353 KCNA4P22459 653 aa17.06■□□□□ 0.32
PCDHA3-201ENST00000522353 NBPF12Q5TAG4 269 aaPredicted RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms