RNA–Protein interactions for RNA: ENST00000521605.1

MRPS28-208, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2 BASIC

Gene MRPS28, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-208ENST00000521605 ERGIC2Q96RQ1 377 aa11.82□□□□□ -0.52
MRPS28-208ENST00000521605 REEP2Q9BRK0 252 aa11.82□□□□□ -0.52
MRPS28-208ENST00000521605 LXNQ9BS40 222 aa11.82□□□□□ -0.52
MRPS28-208ENST00000521605 EMILIN2Q9BXX0 1053 aa11.82□□□□□ -0.52
MRPS28-208ENST00000521605 MRPL9Q9BYD2 267 aaKnown RBP11.82□□□□□ -0.52
MRPS28-208ENST00000521605 EDEM3Q9BZQ6 932 aa11.82□□□□□ -0.52
MRPS28-208ENST00000521605 GBP3Q9H0R5 595 aa11.82□□□□□ -0.52
MRPS28-208ENST00000521605 KCTD10Q9H3F6 313 aa11.82□□□□□ -0.52
MRPS28-208ENST00000521605 ST6GALNAC4Q9H4F1 302 aa11.82□□□□□ -0.52
MRPS28-208ENST00000521605 SLC39A2Q9NP94 309 aa11.82□□□□□ -0.52
MRPS28-208ENST00000521605 PARD6AQ9NPB6 346 aa11.82□□□□□ -0.52
MRPS28-208ENST00000521605 MAN1C1Q9NR34 630 aa11.82□□□□□ -0.52
MRPS28-208ENST00000521605 RGL1Q9NZL6 768 aa11.82□□□□□ -0.52
MRPS28-208ENST00000521605 CGNQ9P2M7 1197 aaKnown RBP11.82□□□□□ -0.52
MRPS28-208ENST00000521605 PYCARDQ9ULZ3 195 aa11.82□□□□□ -0.52
MRPS28-208ENST00000521605 IRAK3Q9Y616 596 aa11.82□□□□□ -0.52
MRPS28-208ENST00000521605 CCDC195A0A1B0GUA6 201 aa11.81□□□□□ -0.52
MRPS28-208ENST00000521605 HBP1O60381 514 aa11.81□□□□□ -0.52
MRPS28-208ENST00000521605 GPR32O75388 356 aa11.81□□□□□ -0.52
MRPS28-208ENST00000521605 CNPP09543 421 aaKnown RBP11.81□□□□□ -0.52
MRPS28-208ENST00000521605 FGFR4P22455 802 aa11.81□□□□□ -0.52
MRPS28-208ENST00000521605 POLGP54098 1239 aaPredicted RBP11.81□□□□□ -0.52
MRPS28-208ENST00000521605 PSMC5P62195 406 aa11.81□□□□□ -0.52
MRPS28-208ENST00000521605 LRMPQ12912 555 aa11.81□□□□□ -0.52
MRPS28-208ENST00000521605 LPAL2Q16609 132 aa11.81□□□□□ -0.52
MRPS28-208ENST00000521605 ZNF528Q3MIS6 628 aa11.81□□□□□ -0.52
MRPS28-208ENST00000521605 TSSK4Q6SA08 328 aa11.81□□□□□ -0.52
MRPS28-208ENST00000521605 GET4Q7L5D6 327 aaPredicted RBP11.81□□□□□ -0.52
MRPS28-208ENST00000521605 TC2NQ8N9U0 490 aa11.81□□□□□ -0.52
MRPS28-208ENST00000521605 SCFD1Q8WVM8 642 aa11.81□□□□□ -0.52
MRPS28-208ENST00000521605 CNOT6LQ96LI5 555 aaKnown RBP11.81□□□□□ -0.52
MRPS28-208ENST00000521605 ZNF830Q96NB3 372 aaPredicted RBP11.81□□□□□ -0.52
MRPS28-208ENST00000521605 BCO2Q9BYV7 579 aa11.81□□□□□ -0.52
MRPS28-208ENST00000521605 C17orf75Q9HAS0 396 aa11.81□□□□□ -0.52
MRPS28-208ENST00000521605 PARVGQ9HBI0 331 aa11.81□□□□□ -0.52
MRPS28-208ENST00000521605 EPS15L1Q9UBC2 864 aa11.81□□□□□ -0.52
MRPS28-208ENST00000521605 KCNG1Q9UIX4 513 aa11.81□□□□□ -0.52
MRPS28-208ENST00000521605 INPP5FQ9Y2H2 1132 aa11.81□□□□□ -0.52
MRPS28-208ENST00000521605 PPME1Q9Y570 386 aa11.81□□□□□ -0.52
MRPS28-208ENST00000521605 PCDHGA2Q9Y5H1 932 aa11.81□□□□□ -0.52
MRPS28-208ENST00000521605 PCDHA10Q9Y5I2 948 aa11.81□□□□□ -0.52
MRPS28-208ENST00000521605 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.81□□□□□ -0.52
MRPS28-208ENST00000521605 CLUHO75153 1309 aa11.81□□□□□ -0.52
MRPS28-208ENST00000521605 CACNA1IQ9P0X4 2223 aa11.8□□□□□ -0.52
MRPS28-208ENST00000521605 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.8□□□□□ -0.52
MRPS28-208ENST00000521605 A0A1W2PQJ5 194 aa11.8□□□□□ -0.52
MRPS28-208ENST00000521605 ARHGEF35A5YM69 484 aa11.8□□□□□ -0.52
MRPS28-208ENST00000521605 TRIM49BA6NDI0 452 aa11.8□□□□□ -0.52
MRPS28-208ENST00000521605 GOLGA6L9A6NEM1 432 aa11.8□□□□□ -0.52
MRPS28-208ENST00000521605 AKR1B15C9JRZ8 316 aaPredicted RBP11.8□□□□□ -0.52
MRPS28-208ENST00000521605 C2CD2LO14523 706 aa11.8□□□□□ -0.52
MRPS28-208ENST00000521605 SLC16A3O15427 465 aaKnown RBP11.8□□□□□ -0.52
MRPS28-208ENST00000521605 C22orf31O95567 290 aa11.8□□□□□ -0.52
MRPS28-208ENST00000521605 TGM1P22735 817 aa11.8□□□□□ -0.52
MRPS28-208ENST00000521605 CLCN3P51790 818 aa11.8□□□□□ -0.52
MRPS28-208ENST00000521605 NLRP11P59045 1033 aaKnown RBP11.8□□□□□ -0.52
MRPS28-208ENST00000521605 CYP4A11Q02928 519 aa11.8□□□□□ -0.52
MRPS28-208ENST00000521605 SPEM2Q0P670 501 aa11.8□□□□□ -0.52
MRPS28-208ENST00000521605 UBXN2BQ14CS0 331 aa11.8□□□□□ -0.52
MRPS28-208ENST00000521605 ACAP1Q15027 740 aa11.8□□□□□ -0.52
MRPS28-208ENST00000521605 MAN2A1Q16706 1144 aa11.8□□□□□ -0.52
MRPS28-208ENST00000521605 KNOP1Q1ED39 458 aaKnown RBP11.8□□□□□ -0.52
MRPS28-208ENST00000521605 TPH2Q8IWU9 490 aa11.8□□□□□ -0.52
MRPS28-208ENST00000521605 LPPQ93052 612 aa11.8□□□□□ -0.52
MRPS28-208ENST00000521605 TUBGCP2Q9BSJ2 902 aa11.8□□□□□ -0.52
MRPS28-208ENST00000521605 STRA6Q9BX79 667 aa11.8□□□□□ -0.52
MRPS28-208ENST00000521605 VN1R3Q9BXE9 311 aa11.8□□□□□ -0.52
MRPS28-208ENST00000521605 WDR6Q9NNW5 1121 aaKnown RBP11.8□□□□□ -0.52
MRPS28-208ENST00000521605 GMEB2Q9UKD1 530 aa11.8□□□□□ -0.52
MRPS28-208ENST00000521605 FBXO4Q9UKT5 387 aa11.8□□□□□ -0.52
MRPS28-208ENST00000521605 MAPK8IP1Q9UQF2 711 aa11.8□□□□□ -0.52
MRPS28-208ENST00000521605 AKT3Q9Y243 479 aa11.8□□□□□ -0.52
MRPS28-208ENST00000521605 MTF2Q9Y483 593 aaPredicted RBP11.8□□□□□ -0.52
MRPS28-208ENST00000521605 NUMBLQ9Y6R0 609 aa11.8□□□□□ -0.52
MRPS28-208ENST00000521605 EVPLQ92817 2033 aa11.8□□□□□ -0.52
MRPS28-208ENST00000521605 MIA3Q5JRA6 1907 aa11.8□□□□□ -0.52
MRPS28-208ENST00000521605 COL1A2P08123 1366 aa11.79□□□□□ -0.52
MRPS28-208ENST00000521605 A0A0U1RQF3 1178 aa11.79□□□□□ -0.52
MRPS28-208ENST00000521605 ZBTB42B2RXF5 422 aa11.79□□□□□ -0.52
MRPS28-208ENST00000521605 INPPL1O15357 1258 aa11.79□□□□□ -0.52
MRPS28-208ENST00000521605 TEX33O43247 280 aa11.79□□□□□ -0.52
MRPS28-208ENST00000521605 CALUO43852 315 aaPredicted RBP11.79□□□□□ -0.52
MRPS28-208ENST00000521605 MFAP3LO75121 409 aa11.79□□□□□ -0.52
MRPS28-208ENST00000521605 RFPL2O75678 378 aa11.79□□□□□ -0.52
MRPS28-208ENST00000521605 ATG7O95352 703 aa11.79□□□□□ -0.52
MRPS28-208ENST00000521605 GALTP07902 379 aa11.79□□□□□ -0.52
MRPS28-208ENST00000521605 RPL13P26373 211 aaKnown RBP11.79□□□□□ -0.52
MRPS28-208ENST00000521605 RARRES1P49788 294 aa11.79□□□□□ -0.52
MRPS28-208ENST00000521605 SLC26A2P50443 739 aa11.79□□□□□ -0.52
MRPS28-208ENST00000521605 MCCD1P59942 119 aaPredicted RBP11.79□□□□□ -0.52
MRPS28-208ENST00000521605 RNASELQ05823 741 aaKnown RBP11.79□□□□□ -0.52
MRPS28-208ENST00000521605 CTTNQ14247 550 aaKnown RBP11.79□□□□□ -0.52
MRPS28-208ENST00000521605 ZNF484Q5JVG2 852 aa11.79□□□□□ -0.52
MRPS28-208ENST00000521605 FKBP15Q5T1M5 1219 aa11.79□□□□□ -0.52
MRPS28-208ENST00000521605 FAM160B1Q5W0V3 765 aa11.79□□□□□ -0.52
MRPS28-208ENST00000521605 ZNF598Q86UK7 904 aaKnown RBP11.79□□□□□ -0.52
MRPS28-208ENST00000521605 TMEM139Q8IV31 216 aa11.79□□□□□ -0.52
MRPS28-208ENST00000521605 SLC9A9Q8IVB4 645 aa11.79□□□□□ -0.52
MRPS28-208ENST00000521605 CCDC60Q8IWA6 550 aaPredicted RBP11.79□□□□□ -0.52
MRPS28-208ENST00000521605 BBXQ8WY36 941 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms