RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 MSH6P52701 1360 aa4.25□□□□□ -1.73
VPS13B-209ENST00000521559 NRXN3Q9Y4C0 1643 aa4.24□□□□□ -1.73
VPS13B-209ENST00000521559 AHRRA9YTQ3 701 aa4.24□□□□□ -1.73
VPS13B-209ENST00000521559 B3GALT2O43825 422 aa4.24□□□□□ -1.73
VPS13B-209ENST00000521559 ENDOD1O94919 500 aa4.24□□□□□ -1.73
VPS13B-209ENST00000521559 HSPA5P11021 654 aaKnown RBP4.24□□□□□ -1.73
VPS13B-209ENST00000521559 NHLH2Q02577 135 aa4.24□□□□□ -1.73
VPS13B-209ENST00000521559 SP140Q13342 867 aa4.24□□□□□ -1.73
VPS13B-209ENST00000521559 RRP12Q5JTH9 1297 aaKnown RBP4.24□□□□□ -1.73
VPS13B-209ENST00000521559 ZNF572Q7Z3I7 529 aaPredicted RBP4.24□□□□□ -1.73
VPS13B-209ENST00000521559 KCNK18Q7Z418 384 aa4.24□□□□□ -1.73
VPS13B-209ENST00000521559 FAM177A1Q8N128 213 aaPredicted RBP4.24□□□□□ -1.73
VPS13B-209ENST00000521559 TSPEARQ8WU66 669 aa4.24□□□□□ -1.73
VPS13B-209ENST00000521559 TGFBRAP1Q8WUH2 860 aa4.24□□□□□ -1.73
VPS13B-209ENST00000521559 PUS7Q96PZ0 661 aaKnown RBP4.24□□□□□ -1.73
VPS13B-209ENST00000521559 TESK2Q96S53 571 aa4.24□□□□□ -1.73
VPS13B-209ENST00000521559 CDK19Q9BWU1 502 aa4.24□□□□□ -1.73
VPS13B-209ENST00000521559 CYP4F11Q9HBI6 524 aa4.24□□□□□ -1.73
VPS13B-209ENST00000521559 AKIP1Q9NQ31 210 aa4.24□□□□□ -1.73
VPS13B-209ENST00000521559 DNAJC28Q9NX36 388 aa4.24□□□□□ -1.73
VPS13B-209ENST00000521559 DMRT1Q9Y5R6 373 aa4.24□□□□□ -1.73
VPS13B-209ENST00000521559 DLC1Q96QB1 1528 aa4.24□□□□□ -1.73
VPS13B-209ENST00000521559 PPLO60437 1756 aa4.24□□□□□ -1.73
VPS13B-209ENST00000521559 EIF3AQ14152 1382 aaKnown RBP4.24□□□□□ -1.73
VPS13B-209ENST00000521559 USP47Q96K76 1375 aa4.24□□□□□ -1.73
VPS13B-209ENST00000521559 EVC2Q86UK5 1308 aa4.23□□□□□ -1.73
VPS13B-209ENST00000521559 NWD1Q149M9 1564 aa4.23□□□□□ -1.73
VPS13B-209ENST00000521559 ADGRL3Q9HAR2 1447 aa4.23□□□□□ -1.73
VPS13B-209ENST00000521559 FAM171A2A8MVW0 826 aa4.23□□□□□ -1.73
VPS13B-209ENST00000521559 TEX33O43247 280 aa4.23□□□□□ -1.73
VPS13B-209ENST00000521559 PPFIA2O75334 1257 aa4.23□□□□□ -1.73
VPS13B-209ENST00000521559 GCP02774 474 aa4.23□□□□□ -1.73
VPS13B-209ENST00000521559 ZSCAN20P17040 1043 aaPredicted RBP4.23□□□□□ -1.73
VPS13B-209ENST00000521559 BMPR1AP36894 532 aa4.23□□□□□ -1.73
VPS13B-209ENST00000521559 USP14P54578 494 aa4.23□□□□□ -1.73
VPS13B-209ENST00000521559 RNASE9P60153 205 aaKnown RBP4.23□□□□□ -1.73
VPS13B-209ENST00000521559 CCT2P78371 535 aaKnown RBP4.23□□□□□ -1.73
VPS13B-209ENST00000521559 MALLQ13021 153 aa4.23□□□□□ -1.73
VPS13B-209ENST00000521559 TOR2AQ5JU69 321 aa4.23□□□□□ -1.73
VPS13B-209ENST00000521559 MFSD14BQ5SR56 506 aa4.23□□□□□ -1.73
VPS13B-209ENST00000521559 ATXN7L2Q5T6C5 722 aaPredicted RBP4.23□□□□□ -1.73
VPS13B-209ENST00000521559 MBNL2Q5VZF2 373 aaKnown RBP4.23□□□□□ -1.73
VPS13B-209ENST00000521559 EGFLAMQ63HQ2 1017 aa4.23□□□□□ -1.73
VPS13B-209ENST00000521559 ANKS6Q68DC2 871 aa4.23□□□□□ -1.73
VPS13B-209ENST00000521559 AMOTL1Q8IY63 956 aa4.23□□□□□ -1.73
VPS13B-209ENST00000521559 DRC7Q8IY82 874 aa4.23□□□□□ -1.73
VPS13B-209ENST00000521559 RPUSD2Q8IZ73 545 aaKnown RBP4.23□□□□□ -1.73
VPS13B-209ENST00000521559 SSH1Q8WYL5 1049 aa4.23□□□□□ -1.73
VPS13B-209ENST00000521559 CYFIP2Q96F07 1278 aa4.23□□□□□ -1.73
VPS13B-209ENST00000521559 CEP95Q96GE4 821 aa4.23□□□□□ -1.73
VPS13B-209ENST00000521559 SENP6Q9GZR1 1112 aaPredicted RBP4.23□□□□□ -1.73
VPS13B-209ENST00000521559 LANCL2Q9NS86 450 aa4.23□□□□□ -1.73
VPS13B-209ENST00000521559 TMEM140Q9NV12 185 aa4.23□□□□□ -1.73
VPS13B-209ENST00000521559 PACSIN3Q9UKS6 424 aa4.23□□□□□ -1.73
VPS13B-209ENST00000521559 ATP11BQ9Y2G3 1177 aa4.23□□□□□ -1.73
VPS13B-209ENST00000521559 HS3ST4Q9Y661 456 aa4.23□□□□□ -1.73
VPS13B-209ENST00000521559 IQSEC2Q5JU85 1478 aa4.23□□□□□ -1.73
VPS13B-209ENST00000521559 LAMC1P11047 1609 aa4.22□□□□□ -1.73
VPS13B-209ENST00000521559 POLR1AO95602 1720 aaPredicted RBP4.22□□□□□ -1.73
VPS13B-209ENST00000521559 IFT172Q9UG01 1749 aa4.22□□□□□ -1.73
VPS13B-209ENST00000521559 TMEM200CA6NKL6 621 aa4.22□□□□□ -1.73
VPS13B-209ENST00000521559 CXorf49A8MYA2 514 aaPredicted RBP4.22□□□□□ -1.73
VPS13B-209ENST00000521559 K7ESF4 209 aa4.22□□□□□ -1.73
VPS13B-209ENST00000521559 LEFTY2O00292 366 aa4.22□□□□□ -1.73
VPS13B-209ENST00000521559 PRKD3O94806 890 aa4.22□□□□□ -1.73
VPS13B-209ENST00000521559 NDUFA10O95299 355 aa4.22□□□□□ -1.73
VPS13B-209ENST00000521559 GSPT1P15170 499 aaKnown RBP4.22□□□□□ -1.73
VPS13B-209ENST00000521559 NR4A1P22736 598 aa4.22□□□□□ -1.73
VPS13B-209ENST00000521559 GPR3P46089 330 aa4.22□□□□□ -1.73
VPS13B-209ENST00000521559 AVPR1BP47901 424 aa4.22□□□□□ -1.73
VPS13B-209ENST00000521559 BLOC1S1P78537 153 aa4.22□□□□□ -1.73
VPS13B-209ENST00000521559 TMF1P82094 1093 aa4.22□□□□□ -1.73
VPS13B-209ENST00000521559 SRSF2Q01130 221 aaKnown RBP4.22□□□□□ -1.73
VPS13B-209ENST00000521559 FSTL1Q12841 308 aa4.22□□□□□ -1.73
VPS13B-209ENST00000521559 NOMO1Q15155 1222 aa4.22□□□□□ -1.73
VPS13B-209ENST00000521559 SPDYE7PQ495Y7 208 aa4.22□□□□□ -1.73
VPS13B-209ENST00000521559 ARHGEF19Q8IW93 802 aa4.22□□□□□ -1.73
VPS13B-209ENST00000521559 CMIPQ8IY22 773 aa4.22□□□□□ -1.73
VPS13B-209ENST00000521559 TRMT2AQ8IZ69 625 aaKnown RBP4.22□□□□□ -1.73
VPS13B-209ENST00000521559 PQLC1Q8N2U9 271 aa4.22□□□□□ -1.73
VPS13B-209ENST00000521559 LCORLQ8N3X6 602 aa4.22□□□□□ -1.73
VPS13B-209ENST00000521559 SUPT20HQ8NEM7 779 aa4.22□□□□□ -1.73
VPS13B-209ENST00000521559 FBXO41Q8TF61 875 aa4.22□□□□□ -1.73
VPS13B-209ENST00000521559 CASKIN2Q8WXE0 1202 aa4.22□□□□□ -1.73
VPS13B-209ENST00000521559 ZG16BQ96DA0 208 aa4.22□□□□□ -1.73
VPS13B-209ENST00000521559 MANSC1Q9H8J5 431 aa4.22□□□□□ -1.73
VPS13B-209ENST00000521559 SPC25Q9HBM1 224 aa4.22□□□□□ -1.73
VPS13B-209ENST00000521559 VTA1Q9NP79 307 aa4.22□□□□□ -1.73
VPS13B-209ENST00000521559 SCOCQ9UIL1 159 aa4.22□□□□□ -1.73
VPS13B-209ENST00000521559 CHST2Q9Y4C5 530 aa4.22□□□□□ -1.73
VPS13B-209ENST00000521559 FPGT-TNNI3KV9GXZ4 949 aa4.22□□□□□ -1.73
VPS13B-209ENST00000521559 MYO5BQ9ULV0 1848 aa4.22□□□□□ -1.73
VPS13B-209ENST00000521559 SBNO2Q9Y2G9 1366 aa4.22□□□□□ -1.73
VPS13B-209ENST00000521559 DCCP43146 1447 aa4.21□□□□□ -1.73
VPS13B-209ENST00000521559 CENPVL1A0A0U1RR11 272 aa4.21□□□□□ -1.74
VPS13B-209ENST00000521559 DRGXA6NNA5 263 aa4.21□□□□□ -1.74
VPS13B-209ENST00000521559 ADCY6O43306 1168 aa4.21□□□□□ -1.74
VPS13B-209ENST00000521559 NCR1O76036 304 aa4.21□□□□□ -1.74
VPS13B-209ENST00000521559 POMCP01189 267 aa4.21□□□□□ -1.74
VPS13B-209ENST00000521559 ALOX15P16050 662 aaPredicted RBP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 916.4 ms