RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 TMEM41AQ96HV5 264 aa4.23□□□□□ -1.73
HMGN1P28-201ENST00000521340 SUCLG2Q96I99 432 aa4.23□□□□□ -1.73
HMGN1P28-201ENST00000521340 VPS11Q9H270 941 aa4.23□□□□□ -1.73
HMGN1P28-201ENST00000521340 ZNF287Q9HBT7 754 aa4.23□□□□□ -1.73
HMGN1P28-201ENST00000521340 JADE2Q9NQC1 790 aa4.23□□□□□ -1.73
HMGN1P28-201ENST00000521340 GNL3LQ9NVN8 582 aaKnown RBP4.23□□□□□ -1.73
HMGN1P28-201ENST00000521340 PIH1D1Q9NWS0 290 aaKnown RBP4.23□□□□□ -1.73
HMGN1P28-201ENST00000521340 ZDHHC8Q9ULC8 765 aa4.23□□□□□ -1.73
HMGN1P28-201ENST00000521340 SLC45A2Q9UMX9 530 aa4.23□□□□□ -1.73
HMGN1P28-201ENST00000521340 PCDHGB2Q9Y5G2 931 aa4.23□□□□□ -1.73
HMGN1P28-201ENST00000521340 MORC2Q9Y6X9 1032 aaPredicted RBP4.23□□□□□ -1.73
HMGN1P28-201ENST00000521340 A0A087WZ62 844 aa4.22□□□□□ -1.73
HMGN1P28-201ENST00000521340 ADAMTS3O15072 1205 aa4.22□□□□□ -1.73
HMGN1P28-201ENST00000521340 FOXD2O60548 495 aaPredicted RBP4.22□□□□□ -1.73
HMGN1P28-201ENST00000521340 TLR5O60602 858 aa4.22□□□□□ -1.73
HMGN1P28-201ENST00000521340 STC2O76061 302 aa4.22□□□□□ -1.73
HMGN1P28-201ENST00000521340 CD1AP06126 327 aa4.22□□□□□ -1.73
HMGN1P28-201ENST00000521340 HARSP12081 509 aaKnown RBP4.22□□□□□ -1.73
HMGN1P28-201ENST00000521340 PI3P19957 117 aa4.22□□□□□ -1.73
HMGN1P28-201ENST00000521340 FGFR2P21802 821 aa4.22□□□□□ -1.73
HMGN1P28-201ENST00000521340 FDXRP22570 491 aa4.22□□□□□ -1.73
HMGN1P28-201ENST00000521340 PIK3CGP48736 1102 aa4.22□□□□□ -1.73
HMGN1P28-201ENST00000521340 BPIFB4P59827 614 aa4.22□□□□□ -1.73
HMGN1P28-201ENST00000521340 TNFAIP2Q03169 654 aa4.22□□□□□ -1.73
HMGN1P28-201ENST00000521340 PABPC1LQ4VXU2 614 aaKnown RBP4.22□□□□□ -1.73
HMGN1P28-201ENST00000521340 FAM26FQ5R3K3 315 aa4.22□□□□□ -1.73
HMGN1P28-201ENST00000521340 ANO1Q5XXA6 986 aa4.22□□□□□ -1.73
HMGN1P28-201ENST00000521340 ANKS6Q68DC2 871 aa4.22□□□□□ -1.73
HMGN1P28-201ENST00000521340 LVRNQ6Q4G3 990 aa4.22□□□□□ -1.73
HMGN1P28-201ENST00000521340 GADL1Q6ZQY3 521 aa4.22□□□□□ -1.73
HMGN1P28-201ENST00000521340 RTKN2Q8IZC4 609 aa4.22□□□□□ -1.73
HMGN1P28-201ENST00000521340 CMTM4Q8IZR5 234 aa4.22□□□□□ -1.73
HMGN1P28-201ENST00000521340 ANKRD53Q8N9V6 530 aa4.22□□□□□ -1.73
HMGN1P28-201ENST00000521340 RABGGTAQ92696 567 aa4.22□□□□□ -1.73
HMGN1P28-201ENST00000521340 PWWP2AQ96N64 755 aa4.22□□□□□ -1.73
HMGN1P28-201ENST00000521340 BRIP1Q9BX63 1249 aa4.22□□□□□ -1.73
HMGN1P28-201ENST00000521340 SENP6Q9GZR1 1112 aaPredicted RBP4.22□□□□□ -1.73
HMGN1P28-201ENST00000521340 C11orf54Q9H0W9 315 aaPredicted RBP4.22□□□□□ -1.73
HMGN1P28-201ENST00000521340 CERS4Q9HA82 394 aa4.22□□□□□ -1.73
HMGN1P28-201ENST00000521340 AS3MTQ9HBK9 375 aa4.22□□□□□ -1.73
HMGN1P28-201ENST00000521340 GPR35Q9HC97 309 aa4.22□□□□□ -1.73
HMGN1P28-201ENST00000521340 AGO4Q9HCK5 861 aaKnown RBP4.22□□□□□ -1.73
HMGN1P28-201ENST00000521340 TMEM140Q9NV12 185 aa4.22□□□□□ -1.73
HMGN1P28-201ENST00000521340 VSX1Q9NZR4 365 aaPredicted RBP4.22□□□□□ -1.73
HMGN1P28-201ENST00000521340 PGAP2Q9UHJ9 254 aa4.22□□□□□ -1.73
HMGN1P28-201ENST00000521340 FEZ2Q9UHY8 353 aaPredicted RBP4.22□□□□□ -1.73
HMGN1P28-201ENST00000521340 AGAP1Q9UPQ3 857 aa4.22□□□□□ -1.73
HMGN1P28-201ENST00000521340 A0A087WWL8 130 aa4.21□□□□□ -1.74
HMGN1P28-201ENST00000521340 BTN3A1O00481 513 aa4.21□□□□□ -1.74
HMGN1P28-201ENST00000521340 APOL1O14791 398 aa4.21□□□□□ -1.74
HMGN1P28-201ENST00000521340 AREL1O15033 823 aa4.21□□□□□ -1.74
HMGN1P28-201ENST00000521340 ARHGAP6O43182 974 aa4.21□□□□□ -1.74
HMGN1P28-201ENST00000521340 HOXA3O43365 443 aaPredicted RBP4.21□□□□□ -1.74
HMGN1P28-201ENST00000521340 SRGNP10124 158 aa4.21□□□□□ -1.74
HMGN1P28-201ENST00000521340 SMARCA1P28370 1054 aa4.21□□□□□ -1.74
HMGN1P28-201ENST00000521340 PTPN7P35236 360 aa4.21□□□□□ -1.74
HMGN1P28-201ENST00000521340 GZMKP49863 264 aa4.21□□□□□ -1.74
HMGN1P28-201ENST00000521340 RENBPP51606 427 aa4.21□□□□□ -1.74
HMGN1P28-201ENST00000521340 PTTG1IPP53801 180 aa4.21□□□□□ -1.74
HMGN1P28-201ENST00000521340 PER3P56645 1201 aa4.21□□□□□ -1.74
HMGN1P28-201ENST00000521340 RPS16P62249 146 aaKnown RBP4.21□□□□□ -1.74
HMGN1P28-201ENST00000521340 APBA1Q02410 837 aa4.21□□□□□ -1.74
HMGN1P28-201ENST00000521340 DUSP2Q05923 314 aa4.21□□□□□ -1.74
HMGN1P28-201ENST00000521340 CTBP1Q13363 440 aa4.21□□□□□ -1.74
HMGN1P28-201ENST00000521340 TRIM14Q14142 442 aa4.21□□□□□ -1.74
HMGN1P28-201ENST00000521340 CCDC93Q567U6 631 aa4.21□□□□□ -1.74
HMGN1P28-201ENST00000521340 CCDC157Q569K6 752 aa4.21□□□□□ -1.74
HMGN1P28-201ENST00000521340 METRNLQ641Q3 311 aa4.21□□□□□ -1.74
HMGN1P28-201ENST00000521340 MCTP2Q6DN12 878 aa4.21□□□□□ -1.74
HMGN1P28-201ENST00000521340 CNKSR3Q6P9H4 555 aa4.21□□□□□ -1.74
HMGN1P28-201ENST00000521340 ZNF761Q86XN6 746 aaPredicted RBP4.21□□□□□ -1.74
HMGN1P28-201ENST00000521340 LIX1LQ8IVB5 337 aa4.21□□□□□ -1.74
HMGN1P28-201ENST00000521340 GPR135Q8IZ08 494 aa4.21□□□□□ -1.74
HMGN1P28-201ENST00000521340 CACNA2D3Q8IZS8 1091 aa4.21□□□□□ -1.74
HMGN1P28-201ENST00000521340 CARFQ8N187 725 aa4.21□□□□□ -1.74
HMGN1P28-201ENST00000521340 VGLL2Q8N8G2 317 aa4.21□□□□□ -1.74
HMGN1P28-201ENST00000521340 ACRBPQ8NEB7 543 aa4.21□□□□□ -1.74
HMGN1P28-201ENST00000521340 OR14K1Q8NGZ2 314 aa4.21□□□□□ -1.74
HMGN1P28-201ENST00000521340 OR56A3Q8NH54 315 aa4.21□□□□□ -1.74
HMGN1P28-201ENST00000521340 CYP2W1Q8TAV3 490 aa4.21□□□□□ -1.74
HMGN1P28-201ENST00000521340 BRIX1Q8TDN6 353 aaKnown RBP4.21□□□□□ -1.74
HMGN1P28-201ENST00000521340 ADAMTS17Q8TE56 1095 aa4.21□□□□□ -1.74
HMGN1P28-201ENST00000521340 GCDHQ92947 438 aaPredicted RBP4.21□□□□□ -1.74
HMGN1P28-201ENST00000521340 ISCA1Q9BUE6 129 aa4.21□□□□□ -1.74
HMGN1P28-201ENST00000521340 MRI1Q9BV20 369 aa4.21□□□□□ -1.74
HMGN1P28-201ENST00000521340 LSM14BQ9BX40 385 aaKnown RBP4.21□□□□□ -1.74
HMGN1P28-201ENST00000521340 STK33Q9BYT3 514 aa4.21□□□□□ -1.74
HMGN1P28-201ENST00000521340 UBA5Q9GZZ9 404 aa4.21□□□□□ -1.74
HMGN1P28-201ENST00000521340 TMEM168Q9H0V1 697 aa4.21□□□□□ -1.74
HMGN1P28-201ENST00000521340 XYLT2Q9H1B5 865 aa4.21□□□□□ -1.74
HMGN1P28-201ENST00000521340 L2HGDHQ9H9P8 463 aa4.21□□□□□ -1.74
HMGN1P28-201ENST00000521340 SARS2Q9NP81 518 aaKnown RBP4.21□□□□□ -1.74
HMGN1P28-201ENST00000521340 AFF4Q9UHB7 1163 aaKnown RBP4.21□□□□□ -1.74
HMGN1P28-201ENST00000521340 IRAK3Q9Y616 596 aa4.21□□□□□ -1.74
HMGN1P28-201ENST00000521340 SLC4A7Q9Y6M7 1214 aa4.21□□□□□ -1.74
HMGN1P28-201ENST00000521340 DGKBQ9Y6T7 804 aa4.21□□□□□ -1.74
HMGN1P28-201ENST00000521340 TCRBV7S2A1N4TA0A589 114 aa4.2□□□□□ -1.74
HMGN1P28-201ENST00000521340 CLCA1A8K7I4 914 aa4.2□□□□□ -1.74
HMGN1P28-201ENST00000521340 E9PLN8 166 aa4.2□□□□□ -1.74
HMGN1P28-201ENST00000521340 RFXAPO00287 272 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms