RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 KIAA0556O60303 1618 aa5.68□□□□□ -1.5
CLK4-207ENST00000520909 TRGV11A0A075B6L2 103 aa5.68□□□□□ -1.5
CLK4-207ENST00000520909 CCDC151A5D8V7 595 aa5.68□□□□□ -1.5
CLK4-207ENST00000520909 GSG1L2A8MUP6 293 aa5.68□□□□□ -1.5
CLK4-207ENST00000520909 ULK1O75385 1050 aa5.68□□□□□ -1.5
CLK4-207ENST00000520909 ALAS1P13196 640 aa5.68□□□□□ -1.5
CLK4-207ENST00000520909 MTHFD2P13995 350 aa5.68□□□□□ -1.5
CLK4-207ENST00000520909 GPD1P21695 349 aa5.68□□□□□ -1.5
CLK4-207ENST00000520909 GUCY1A2P33402 732 aa5.68□□□□□ -1.5
CLK4-207ENST00000520909 ALDH1A3P47895 512 aa5.68□□□□□ -1.5
CLK4-207ENST00000520909 DALRD3Q5D0E6 543 aaKnown RBP5.68□□□□□ -1.5
CLK4-207ENST00000520909 UBE3BQ7Z3V4 1068 aa5.68□□□□□ -1.5
CLK4-207ENST00000520909 SSH3Q8TE77 659 aa5.68□□□□□ -1.5
CLK4-207ENST00000520909 TSPEARQ8WU66 669 aa5.68□□□□□ -1.5
CLK4-207ENST00000520909 PCGF6Q9BYE7 350 aa5.68□□□□□ -1.5
CLK4-207ENST00000520909 IFT122Q9HBG6 1241 aa5.68□□□□□ -1.5
CLK4-207ENST00000520909 CPNE5Q9HCH3 593 aa5.68□□□□□ -1.5
CLK4-207ENST00000520909 FBXO34Q9NWN3 711 aa5.68□□□□□ -1.5
CLK4-207ENST00000520909 ZBTB21Q9ULJ3 1066 aa5.68□□□□□ -1.5
CLK4-207ENST00000520909 FYCO1Q9BQS8 1478 aa5.67□□□□□ -1.5
CLK4-207ENST00000520909 CLASP1Q7Z460 1538 aa5.67□□□□□ -1.5
CLK4-207ENST00000520909 YY2O15391 372 aa5.67□□□□□ -1.5
CLK4-207ENST00000520909 SF3B3Q15393 1217 aaKnown RBP5.67□□□□□ -1.5
CLK4-207ENST00000520909 GEN1Q17RS7 908 aa5.67□□□□□ -1.5
CLK4-207ENST00000520909 KAZNQ674X7 775 aa5.67□□□□□ -1.5
CLK4-207ENST00000520909 SEM1Q6ZVN7 128 aa5.67□□□□□ -1.5
CLK4-207ENST00000520909 FITM2Q8N6M3 262 aa5.67□□□□□ -1.5
CLK4-207ENST00000520909 ZNF366Q8N895 744 aa5.67□□□□□ -1.5
CLK4-207ENST00000520909 CLRN3Q8NCR9 226 aa5.67□□□□□ -1.5
CLK4-207ENST00000520909 NUP133Q8WUM0 1156 aa5.67□□□□□ -1.5
CLK4-207ENST00000520909 CASKIN2Q8WXE0 1202 aa5.67□□□□□ -1.5
CLK4-207ENST00000520909 MYOCQ99972 504 aa5.67□□□□□ -1.5
CLK4-207ENST00000520909 LDAHQ9H6V9 325 aa5.67□□□□□ -1.5
CLK4-207ENST00000520909 SLC23A1Q9UHI7 598 aa5.67□□□□□ -1.5
CLK4-207ENST00000520909 SCOCQ9UIL1 159 aa5.67□□□□□ -1.5
CLK4-207ENST00000520909 AJAP1Q9UKB5 411 aaPredicted RBP5.67□□□□□ -1.5
CLK4-207ENST00000520909 ENTPD2Q9Y5L3 495 aa5.67□□□□□ -1.5
CLK4-207ENST00000520909 PCF11O94913 1555 aaKnown RBP5.66□□□□□ -1.5
CLK4-207ENST00000520909 KAT6AQ92794 2004 aa5.66□□□□□ -1.5
CLK4-207ENST00000520909 WDR91A4D1P6 747 aa5.66□□□□□ -1.5
CLK4-207ENST00000520909 ZFPL1O95159 310 aa5.66□□□□□ -1.5
CLK4-207ENST00000520909 BPIP17213 487 aa5.66□□□□□ -1.5
CLK4-207ENST00000520909 WT1P19544 449 aaPredicted RBP5.66□□□□□ -1.5
CLK4-207ENST00000520909 PROK1P58294 105 aa5.66□□□□□ -1.5
CLK4-207ENST00000520909 NOMO1Q15155 1222 aa5.66□□□□□ -1.5
CLK4-207ENST00000520909 DHCR24Q15392 516 aa5.66□□□□□ -1.5
CLK4-207ENST00000520909 MUM1Q2TAK8 710 aa5.66□□□□□ -1.5
CLK4-207ENST00000520909 LCE1AQ5T7P2 110 aa5.66□□□□□ -1.5
CLK4-207ENST00000520909 ACE2Q9BYF1 805 aaPredicted RBP5.66□□□□□ -1.5
CLK4-207ENST00000520909 GSTO2Q9H4Y5 243 aa5.66□□□□□ -1.5
CLK4-207ENST00000520909 PIF1Q9H611 641 aa5.66□□□□□ -1.5
CLK4-207ENST00000520909 IFT22Q9H7X7 185 aa5.66□□□□□ -1.5
CLK4-207ENST00000520909 ACTL7AQ9Y615 435 aa5.66□□□□□ -1.5
CLK4-207ENST00000520909 GOLGA8AA7E2F4 631 aa5.65□□□□□ -1.51
CLK4-207ENST00000520909 MPPED1O15442 326 aa5.65□□□□□ -1.51
CLK4-207ENST00000520909 ZEB2O60315 1214 aa5.65□□□□□ -1.51
CLK4-207ENST00000520909 CDC45O75419 566 aa5.65□□□□□ -1.51
CLK4-207ENST00000520909 ENDOD1O94919 500 aa5.65□□□□□ -1.51
CLK4-207ENST00000520909 FPR1P21462 350 aa5.65□□□□□ -1.51
CLK4-207ENST00000520909 NOMO3P69849 1222 aa5.65□□□□□ -1.51
CLK4-207ENST00000520909 ANO4Q32M45 955 aa5.65□□□□□ -1.51
CLK4-207ENST00000520909 NOMO2Q5JPE7 1267 aa5.65□□□□□ -1.51
CLK4-207ENST00000520909 KIAA0895LQ68EN5 471 aa5.65□□□□□ -1.51
CLK4-207ENST00000520909 VWA1Q6PCB0 445 aa5.65□□□□□ -1.51
CLK4-207ENST00000520909 Q8N9P0 234 aaPredicted RBP5.65□□□□□ -1.51
CLK4-207ENST00000520909 C9orf106Q8NAJ2 232 aa5.65□□□□□ -1.51
CLK4-207ENST00000520909 SARAFQ96BY9 339 aa5.65□□□□□ -1.51
CLK4-207ENST00000520909 CYFIP2Q96F07 1278 aa5.65□□□□□ -1.51
CLK4-207ENST00000520909 ADI1Q9BV57 179 aa5.65□□□□□ -1.51
CLK4-207ENST00000520909 QRSL1Q9H0R6 528 aaKnown RBP5.65□□□□□ -1.51
CLK4-207ENST00000520909 HSFX1Q9UBD0 423 aa5.65□□□□□ -1.51
CLK4-207ENST00000520909 ZNF70Q9UC06 446 aaPredicted RBP5.65□□□□□ -1.51
CLK4-207ENST00000520909 PLB1Q6P1J6 1458 aa5.65□□□□□ -1.51
CLK4-207ENST00000520909 ERCC6L2Q5T890 1561 aa5.65□□□□□ -1.51
CLK4-207ENST00000520909 SHROOM2Q13796 1616 aa5.65□□□□□ -1.51
CLK4-207ENST00000520909 MAP3K1Q13233 1512 aa5.64□□□□□ -1.51
CLK4-207ENST00000520909 MTUS2Q5JR59 1369 aa5.64□□□□□ -1.51
CLK4-207ENST00000520909 NEMP1O14524 444 aa5.64□□□□□ -1.51
CLK4-207ENST00000520909 IKBKBO14920 756 aa5.64□□□□□ -1.51
CLK4-207ENST00000520909 SRGNP10124 158 aa5.64□□□□□ -1.51
CLK4-207ENST00000520909 GSPT1P15170 499 aaKnown RBP5.64□□□□□ -1.51
CLK4-207ENST00000520909 SOX10P56693 466 aa5.64□□□□□ -1.51
CLK4-207ENST00000520909 PPP3CAQ08209 521 aa5.64□□□□□ -1.51
CLK4-207ENST00000520909 MAPK7Q13164 816 aa5.64□□□□□ -1.51
CLK4-207ENST00000520909 SRSF7Q16629 238 aaKnown RBP eCLIP5.64□□□□□ -1.51
CLK4-207ENST00000520909 ZNF425Q6IV72 752 aa5.64□□□□□ -1.51
CLK4-207ENST00000520909 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.64□□□□□ -1.51
CLK4-207ENST00000520909 HASPINQ8TF76 798 aa5.64□□□□□ -1.51
CLK4-207ENST00000520909 TGFBRAP1Q8WUH2 860 aa5.64□□□□□ -1.51
CLK4-207ENST00000520909 HOXB13Q92826 284 aaPredicted RBP5.64□□□□□ -1.51
CLK4-207ENST00000520909 FBXL20Q96IG2 436 aa5.64□□□□□ -1.51
CLK4-207ENST00000520909 TTC1Q99614 292 aa5.64□□□□□ -1.51
CLK4-207ENST00000520909 MAPRE3Q9UPY8 281 aa5.64□□□□□ -1.51
CLK4-207ENST00000520909 TIAM1Q13009 1591 aa5.63□□□□□ -1.51
CLK4-207ENST00000520909 LRRC9Q6ZRR7 1453 aa5.63□□□□□ -1.51
CLK4-207ENST00000520909 UACAQ9BZF9 1416 aa5.63□□□□□ -1.51
CLK4-207ENST00000520909 A0A087X0B3 334 aa5.63□□□□□ -1.51
CLK4-207ENST00000520909 WIPF3A6NGB9 483 aa5.63□□□□□ -1.51
CLK4-207ENST00000520909 MANSC4A6NHS7 340 aaPredicted RBP5.63□□□□□ -1.51
CLK4-207ENST00000520909 CELA2AP08217 269 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms