RNA–Protein interactions for RNA: ENST00000520889.1

IGHV4-55-201, Transcript of immunoglobulin heavy variable 4-55 (pseudogene), humanhuman

BASIC

Gene IGHV4-55, Length 368 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-55-201ENST00000520889 MTIF2P46199 727 aaKnown RBP6.86□□□□□ -1.31
IGHV4-55-201ENST00000520889 FMO5P49326 533 aa6.86□□□□□ -1.31
IGHV4-55-201ENST00000520889 TAF6P49848 677 aa6.86□□□□□ -1.31
IGHV4-55-201ENST00000520889 GATMP50440 423 aa6.86□□□□□ -1.31
IGHV4-55-201ENST00000520889 MXI1P50539 228 aa6.86□□□□□ -1.31
IGHV4-55-201ENST00000520889 CLCNKBP51801 687 aa6.86□□□□□ -1.31
IGHV4-55-201ENST00000520889 WNT7BP56706 349 aa6.86□□□□□ -1.31
IGHV4-55-201ENST00000520889 BCAR1P56945 870 aa6.86□□□□□ -1.31
IGHV4-55-201ENST00000520889 LILRA4P59901 499 aa6.86□□□□□ -1.31
IGHV4-55-201ENST00000520889 DLG4P78352 724 aa6.86□□□□□ -1.31
IGHV4-55-201ENST00000520889 TFAMQ00059 246 aaKnown RBP6.86□□□□□ -1.31
IGHV4-55-201ENST00000520889 KRT17Q04695 432 aa6.86□□□□□ -1.31
IGHV4-55-201ENST00000520889 SOX4Q06945 474 aaPredicted RBP6.86□□□□□ -1.31
IGHV4-55-201ENST00000520889 KCNH2Q12809 1159 aa6.86□□□□□ -1.31
IGHV4-55-201ENST00000520889 MYO1EQ12965 1108 aa6.86□□□□□ -1.31
IGHV4-55-201ENST00000520889 TRPC3Q13507 836 aa6.86□□□□□ -1.31
IGHV4-55-201ENST00000520889 BMS1Q14692 1282 aaKnown RBP6.86□□□□□ -1.31
IGHV4-55-201ENST00000520889 UVSSAQ2YD98 709 aa6.86□□□□□ -1.31
IGHV4-55-201ENST00000520889 SV2CQ496J9 727 aa6.86□□□□□ -1.31
IGHV4-55-201ENST00000520889 GLRA4Q5JXX5 417 aa6.86□□□□□ -1.31
IGHV4-55-201ENST00000520889 FAM117BQ6P1L5 589 aa6.86□□□□□ -1.31
IGHV4-55-201ENST00000520889 CD300LGQ6UXG3 332 aa6.86□□□□□ -1.31
IGHV4-55-201ENST00000520889 LIMS2Q7Z4I7 341 aa6.86□□□□□ -1.31
IGHV4-55-201ENST00000520889 ZNF280BQ86YH2 543 aa6.86□□□□□ -1.31
IGHV4-55-201ENST00000520889 AOPEPQ8N6M6 819 aa6.86□□□□□ -1.31
IGHV4-55-201ENST00000520889 CCDC150Q8NCX0 1101 aa6.86□□□□□ -1.31
IGHV4-55-201ENST00000520889 FBXL13Q8NEE6 735 aa6.86□□□□□ -1.31
IGHV4-55-201ENST00000520889 JAKMIP2Q96AA8 810 aa6.86□□□□□ -1.31
IGHV4-55-201ENST00000520889 TIFAQ96CG3 184 aa6.86□□□□□ -1.31
IGHV4-55-201ENST00000520889 FAM212AQ96EL1 285 aa6.86□□□□□ -1.31
IGHV4-55-201ENST00000520889 TMEM169Q96HH4 297 aa6.86□□□□□ -1.31
IGHV4-55-201ENST00000520889 TUBGCP2Q9BSJ2 902 aa6.86□□□□□ -1.31
IGHV4-55-201ENST00000520889 IMPG2Q9BZV3 1241 aa6.86□□□□□ -1.31
IGHV4-55-201ENST00000520889 CXCL16Q9H2A7 254 aa6.86□□□□□ -1.31
IGHV4-55-201ENST00000520889 SAMSN1Q9NSI8 373 aaKnown RBP6.86□□□□□ -1.31
IGHV4-55-201ENST00000520889 FANCLQ9NW38 375 aa6.86□□□□□ -1.31
IGHV4-55-201ENST00000520889 MARCH5Q9NX47 278 aa6.86□□□□□ -1.31
IGHV4-55-201ENST00000520889 PUF60Q9UHX1 559 aaKnown RBP6.86□□□□□ -1.31
IGHV4-55-201ENST00000520889 ADAM28Q9UKQ2 775 aa6.86□□□□□ -1.31
IGHV4-55-201ENST00000520889 DSEQ9UL01 958 aa6.86□□□□□ -1.31
IGHV4-55-201ENST00000520889 YBX2Q9Y2T7 364 aaKnown RBP6.86□□□□□ -1.31
IGHV4-55-201ENST00000520889 SF3B1O75533 1304 aaKnown RBP eCLIP6.85□□□□□ -1.31
IGHV4-55-201ENST00000520889 PTPRJQ12913 1337 aa6.85□□□□□ -1.31
IGHV4-55-201ENST00000520889 FSD2A1L4K1 749 aa6.85□□□□□ -1.31
IGHV4-55-201ENST00000520889 LCHNA4D1U4 455 aa6.85□□□□□ -1.31
IGHV4-55-201ENST00000520889 KPNA7A9QM74 516 aa6.85□□□□□ -1.31
IGHV4-55-201ENST00000520889 B4GALT3O60512 393 aa6.85□□□□□ -1.31
IGHV4-55-201ENST00000520889 PHACTR2O75167 634 aa6.85□□□□□ -1.31
IGHV4-55-201ENST00000520889 TADA2AO75478 443 aa6.85□□□□□ -1.31
IGHV4-55-201ENST00000520889 B3GAT3O94766 335 aa6.85□□□□□ -1.31
IGHV4-55-201ENST00000520889 ASS1P00966 412 aaKnown RBP6.85□□□□□ -1.31
IGHV4-55-201ENST00000520889 SOD2P04179 222 aa6.85□□□□□ -1.31
IGHV4-55-201ENST00000520889 ITGB3P05106 788 aa6.85□□□□□ -1.31
IGHV4-55-201ENST00000520889 CYP11A1P05108 521 aa6.85□□□□□ -1.31
IGHV4-55-201ENST00000520889 P4HA1P13674 534 aa6.85□□□□□ -1.31
IGHV4-55-201ENST00000520889 FGFR3P22607 806 aa6.85□□□□□ -1.31
IGHV4-55-201ENST00000520889 PBX2P40425 430 aa6.85□□□□□ -1.31
IGHV4-55-201ENST00000520889 OR1G1P47890 313 aa6.85□□□□□ -1.31
IGHV4-55-201ENST00000520889 SLC11A1P49279 550 aa6.85□□□□□ -1.31
IGHV4-55-201ENST00000520889 RABGGTBP53611 331 aa6.85□□□□□ -1.31
IGHV4-55-201ENST00000520889 CREMQ03060 361 aa6.85□□□□□ -1.31
IGHV4-55-201ENST00000520889 PPP3CAQ08209 521 aa6.85□□□□□ -1.31
IGHV4-55-201ENST00000520889 BIRC3Q13489 604 aa6.85□□□□□ -1.31
IGHV4-55-201ENST00000520889 NCOA4Q13772 614 aa6.85□□□□□ -1.31
IGHV4-55-201ENST00000520889 KRT31Q15323 416 aa6.85□□□□□ -1.31
IGHV4-55-201ENST00000520889 USP41Q3LFD5 358 aa6.85□□□□□ -1.31
IGHV4-55-201ENST00000520889 FILIP1LQ4L180 1135 aa6.85□□□□□ -1.31
IGHV4-55-201ENST00000520889 VWA3BQ502W6 1294 aa6.85□□□□□ -1.31
IGHV4-55-201ENST00000520889 PAN2Q504Q3 1202 aaKnown RBP6.85□□□□□ -1.31
IGHV4-55-201ENST00000520889 EPC2Q52LR7 807 aa6.85□□□□□ -1.31
IGHV4-55-201ENST00000520889 DCAF17Q5H9S7 520 aaPredicted RBP6.85□□□□□ -1.31
IGHV4-55-201ENST00000520889 MIIPQ5JXC2 388 aa6.85□□□□□ -1.31
IGHV4-55-201ENST00000520889 SPOUT1Q5T280 376 aaKnown RBP6.85□□□□□ -1.31
IGHV4-55-201ENST00000520889 TCERG1LQ5VWI1 586 aa6.85□□□□□ -1.31
IGHV4-55-201ENST00000520889 TDRD10Q5VZ19 366 aaKnown RBP6.85□□□□□ -1.31
IGHV4-55-201ENST00000520889 PPP2R2DQ66LE6 453 aa6.85□□□□□ -1.31
IGHV4-55-201ENST00000520889 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.85□□□□□ -1.31
IGHV4-55-201ENST00000520889 APTXQ7Z2E3 356 aaKnown RBP6.85□□□□□ -1.31
IGHV4-55-201ENST00000520889 TMCO2Q7Z6W1 182 aaPredicted RBP6.85□□□□□ -1.31
IGHV4-55-201ENST00000520889 TMEM86AQ8N2M4 240 aa6.85□□□□□ -1.31
IGHV4-55-201ENST00000520889 TOP6BLQ8N6T0 577 aa6.85□□□□□ -1.31
IGHV4-55-201ENST00000520889 APPL2Q8NEU8 664 aa6.85□□□□□ -1.31
IGHV4-55-201ENST00000520889 OR5B17Q8NGF7 314 aa6.85□□□□□ -1.31
IGHV4-55-201ENST00000520889 C18orf25Q96B23 403 aaPredicted RBP6.85□□□□□ -1.31
IGHV4-55-201ENST00000520889 IQCDQ96DY2 449 aa6.85□□□□□ -1.31
IGHV4-55-201ENST00000520889 SUSD3Q96L08 255 aa6.85□□□□□ -1.31
IGHV4-55-201ENST00000520889 POP1Q99575 1024 aaKnown RBP6.85□□□□□ -1.31
IGHV4-55-201ENST00000520889 HERC2P3Q9BVR0 1158 aa6.85□□□□□ -1.31
IGHV4-55-201ENST00000520889 MTMR12Q9C0I1 747 aa6.85□□□□□ -1.31
IGHV4-55-201ENST00000520889 NKX2-4Q9H2Z4 354 aa6.85□□□□□ -1.31
IGHV4-55-201ENST00000520889 NDST4Q9H3R1 872 aa6.85□□□□□ -1.31
IGHV4-55-201ENST00000520889 CYP3A43Q9HB55 503 aa6.85□□□□□ -1.31
IGHV4-55-201ENST00000520889 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.85□□□□□ -1.31
IGHV4-55-201ENST00000520889 CHST7Q9NS84 486 aa6.85□□□□□ -1.31
IGHV4-55-201ENST00000520889 RAB20Q9NX57 234 aa6.85□□□□□ -1.31
IGHV4-55-201ENST00000520889 DNAJB4Q9UDY4 337 aa6.85□□□□□ -1.31
IGHV4-55-201ENST00000520889 TUBGCP4Q9UGJ1 667 aa6.85□□□□□ -1.31
IGHV4-55-201ENST00000520889 SIX4Q9UIU6 781 aa6.85□□□□□ -1.31
IGHV4-55-201ENST00000520889 FBXL5Q9UKA1 691 aa6.85□□□□□ -1.31
IGHV4-55-201ENST00000520889 AGAP1Q9UPQ3 857 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms