RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 MYO6Q9UM54 1294 aa9.63□□□□□ -0.87
CSMD1-208ENST00000520561 AGAP1Q9UPQ3 857 aa9.63□□□□□ -0.87
CSMD1-208ENST00000520561 LTBP2Q14767 1821 aa9.63□□□□□ -0.87
CSMD1-208ENST00000520561 MICAL3Q7RTP6 2002 aa9.62□□□□□ -0.87
CSMD1-208ENST00000520561 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.62□□□□□ -0.87
CSMD1-208ENST00000520561 LRRC53A6NM62 1247 aa9.62□□□□□ -0.87
CSMD1-208ENST00000520561 RBAK-RBAKDNI3L0D1 243 aa9.62□□□□□ -0.87
CSMD1-208ENST00000520561 OFD1O75665 1012 aa9.62□□□□□ -0.87
CSMD1-208ENST00000520561 STAU1O95793 577 aaKnown RBP9.62□□□□□ -0.87
CSMD1-208ENST00000520561 AMHP03971 560 aa9.62□□□□□ -0.87
CSMD1-208ENST00000520561 CCDC172P0C7W6 258 aa9.62□□□□□ -0.87
CSMD1-208ENST00000520561 FGFR1P11362 822 aa9.62□□□□□ -0.87
CSMD1-208ENST00000520561 ITGB8P26012 769 aa9.62□□□□□ -0.87
CSMD1-208ENST00000520561 LRPAP1P30533 357 aa9.62□□□□□ -0.87
CSMD1-208ENST00000520561 STAT1P42224 750 aa9.62□□□□□ -0.87
CSMD1-208ENST00000520561 TAF6P49848 677 aa9.62□□□□□ -0.87
CSMD1-208ENST00000520561 YWHAEP62258 255 aaKnown RBP9.62□□□□□ -0.87
CSMD1-208ENST00000520561 FPGSQ05932 587 aa9.62□□□□□ -0.87
CSMD1-208ENST00000520561 CUL2Q13617 745 aa9.62□□□□□ -0.87
CSMD1-208ENST00000520561 ZBTB6Q15916 424 aa9.62□□□□□ -0.87
CSMD1-208ENST00000520561 ASIC2Q16515 512 aa9.62□□□□□ -0.87
CSMD1-208ENST00000520561 TCTN1Q2MV58 587 aa9.62□□□□□ -0.87
CSMD1-208ENST00000520561 SV2CQ496J9 727 aa9.62□□□□□ -0.87
CSMD1-208ENST00000520561 NOMO2Q5JPE7 1267 aa9.62□□□□□ -0.87
CSMD1-208ENST00000520561 CLLU1OSQ5K130 101 aa9.62□□□□□ -0.87
CSMD1-208ENST00000520561 COL13A1Q5TAT6 717 aaPredicted RBP9.62□□□□□ -0.87
CSMD1-208ENST00000520561 SFMBT2Q5VUG0 894 aa9.62□□□□□ -0.87
CSMD1-208ENST00000520561 C9orf57Q5W0N0 161 aa9.62□□□□□ -0.87
CSMD1-208ENST00000520561 SPOPLQ6IQ16 392 aa9.62□□□□□ -0.87
CSMD1-208ENST00000520561 PHLDB3Q6NSJ2 640 aa9.62□□□□□ -0.87
CSMD1-208ENST00000520561 HELQQ8TDG4 1101 aa9.62□□□□□ -0.87
CSMD1-208ENST00000520561 BAP1Q92560 729 aa9.62□□□□□ -0.87
CSMD1-208ENST00000520561 HPDLQ96IR7 371 aa9.62□□□□□ -0.87
CSMD1-208ENST00000520561 FAXDC2Q96IV6 333 aa9.62□□□□□ -0.87
CSMD1-208ENST00000520561 UROC1Q96N76 676 aa9.62□□□□□ -0.87
CSMD1-208ENST00000520561 FAM193BQ96PV7 902 aaPredicted RBP9.62□□□□□ -0.87
CSMD1-208ENST00000520561 DNAJC7Q99615 494 aa9.62□□□□□ -0.87
CSMD1-208ENST00000520561 NAA15Q9BXJ9 866 aaKnown RBP9.62□□□□□ -0.87
CSMD1-208ENST00000520561 MRPL9Q9BYD2 267 aaKnown RBP9.62□□□□□ -0.87
CSMD1-208ENST00000520561 STK33Q9BYT3 514 aa9.62□□□□□ -0.87
CSMD1-208ENST00000520561 XYLT2Q9H1B5 865 aa9.62□□□□□ -0.87
CSMD1-208ENST00000520561 CXCL16Q9H2A7 254 aa9.62□□□□□ -0.87
CSMD1-208ENST00000520561 VRTNQ9H8Y1 702 aa9.62□□□□□ -0.87
CSMD1-208ENST00000520561 APOBEC3GQ9HC16 384 aaKnown RBP9.62□□□□□ -0.87
CSMD1-208ENST00000520561 RNF19AQ9NV58 838 aa9.62□□□□□ -0.87
CSMD1-208ENST00000520561 KANSL3Q9P2N6 904 aa9.62□□□□□ -0.87
CSMD1-208ENST00000520561 CENPFP49454 3210 aa9.61□□□□□ -0.87
CSMD1-208ENST00000520561 F8VZ95 297 aa9.61□□□□□ -0.87
CSMD1-208ENST00000520561 PODXLO00592 558 aa9.61□□□□□ -0.87
CSMD1-208ENST00000520561 LRRN2O75325 713 aa9.61□□□□□ -0.87
CSMD1-208ENST00000520561 CST3P01034 146 aaPredicted RBP9.61□□□□□ -0.87
CSMD1-208ENST00000520561 POMCP01189 267 aa9.61□□□□□ -0.87
CSMD1-208ENST00000520561 RPL9P32969 192 aaKnown RBP9.61□□□□□ -0.87
CSMD1-208ENST00000520561 SOX5P35711 763 aa9.61□□□□□ -0.87
CSMD1-208ENST00000520561 KCNJ6P48051 423 aa9.61□□□□□ -0.87
CSMD1-208ENST00000520561 JAM2P57087 298 aa9.61□□□□□ -0.87
CSMD1-208ENST00000520561 RNASELQ05823 741 aaKnown RBP9.61□□□□□ -0.87
CSMD1-208ENST00000520561 SOX4Q06945 474 aaPredicted RBP9.61□□□□□ -0.87
CSMD1-208ENST00000520561 TUSC3Q13454 348 aa9.61□□□□□ -0.87
CSMD1-208ENST00000520561 ARID5BQ14865 1188 aa9.61□□□□□ -0.87
CSMD1-208ENST00000520561 DRAP1Q14919 205 aaPredicted RBP9.61□□□□□ -0.87
CSMD1-208ENST00000520561 HS1BP3Q53T59 392 aa9.61□□□□□ -0.87
CSMD1-208ENST00000520561 TDRD12Q587J7 1177 aaKnown RBP9.61□□□□□ -0.87
CSMD1-208ENST00000520561 DPY19L2P1Q6NXN4 242 aa9.61□□□□□ -0.87
CSMD1-208ENST00000520561 PSRC1Q6PGN9 363 aaPredicted RBP9.61□□□□□ -0.87
CSMD1-208ENST00000520561 SCARA5Q6ZMJ2 495 aa9.61□□□□□ -0.87
CSMD1-208ENST00000520561 LRRC8AQ8IWT6 810 aa9.61□□□□□ -0.87
CSMD1-208ENST00000520561 TNS4Q8IZW8 715 aa9.61□□□□□ -0.87
CSMD1-208ENST00000520561 LRRC43Q8N309 656 aa9.61□□□□□ -0.87
CSMD1-208ENST00000520561 GSTCDQ8NEC7 633 aa9.61□□□□□ -0.87
CSMD1-208ENST00000520561 SYN2Q92777 582 aaPredicted RBP9.61□□□□□ -0.87
CSMD1-208ENST00000520561 BADQ92934 168 aa9.61□□□□□ -0.87
CSMD1-208ENST00000520561 TATDN2Q93075 761 aa9.61□□□□□ -0.87
CSMD1-208ENST00000520561 JAKMIP2Q96AA8 810 aa9.61□□□□□ -0.87
CSMD1-208ENST00000520561 DDX27Q96GQ7 796 aaKnown RBP9.61□□□□□ -0.87
CSMD1-208ENST00000520561 BAG1Q99933 345 aaPredicted RBP9.61□□□□□ -0.87
CSMD1-208ENST00000520561 LBHD1Q9BQE6 289 aaPredicted RBP9.61□□□□□ -0.87
CSMD1-208ENST00000520561 GOLGA2P5Q9HBQ8 144 aa9.61□□□□□ -0.87
CSMD1-208ENST00000520561 NXF1Q9UBU9 619 aaKnown RBP9.61□□□□□ -0.87
CSMD1-208ENST00000520561 AJAP1Q9UKB5 411 aaPredicted RBP9.61□□□□□ -0.87
CSMD1-208ENST00000520561 PLAGL2Q9UPG8 496 aa9.61□□□□□ -0.87
CSMD1-208ENST00000520561 NUB1Q9Y5A7 615 aa9.61□□□□□ -0.87
CSMD1-208ENST00000520561 ANO9A1A5B4 782 aa9.6□□□□□ -0.87
CSMD1-208ENST00000520561 CASTOR2A6NHX0 329 aa9.6□□□□□ -0.87
CSMD1-208ENST00000520561 ZBBXA8MT70 800 aa9.6□□□□□ -0.87
CSMD1-208ENST00000520561 RNF225M0QZC1 329 aaPredicted RBP9.6□□□□□ -0.87
CSMD1-208ENST00000520561 PIRO00625 290 aa9.6□□□□□ -0.87
CSMD1-208ENST00000520561 ACRP10323 421 aa9.6□□□□□ -0.87
CSMD1-208ENST00000520561 KRT5P13647 590 aa9.6□□□□□ -0.87
CSMD1-208ENST00000520561 FERP16591 822 aa9.6□□□□□ -0.87
CSMD1-208ENST00000520561 SYN1P17600 705 aa9.6□□□□□ -0.87
CSMD1-208ENST00000520561 PAX3P23760 479 aa9.6□□□□□ -0.87
CSMD1-208ENST00000520561 USP8P40818 1118 aa9.6□□□□□ -0.87
CSMD1-208ENST00000520561 ASPAP45381 313 aa9.6□□□□□ -0.87
CSMD1-208ENST00000520561 WDR5P61964 334 aaKnown RBP9.6□□□□□ -0.87
CSMD1-208ENST00000520561 WDR72Q3MJ13 1102 aa9.6□□□□□ -0.87
CSMD1-208ENST00000520561 SMYD5Q6GMV2 418 aa9.6□□□□□ -0.87
CSMD1-208ENST00000520561 CYP26C1Q6V0L0 522 aa9.6□□□□□ -0.87
CSMD1-208ENST00000520561 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.6□□□□□ -0.87
CSMD1-208ENST00000520561 CXorf38Q8TB03 319 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms