RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 PPFIA4O75335 1185 aa27.45■■□□□ 1.98
COL13A1-213ENST00000520267 PPIL2Q13356 520 aa27.45■■□□□ 1.98
COL13A1-213ENST00000520267 MXD4Q14582 209 aaPredicted RBP27.45■■□□□ 1.98
COL13A1-213ENST00000520267 EMC10Q5UCC4 262 aa27.45■■□□□ 1.98
COL13A1-213ENST00000520267 WDR49Q8IV35 697 aa27.45■■□□□ 1.98
COL13A1-213ENST00000520267 DHX37Q8IY37 1157 aaKnown RBP27.45■■□□□ 1.98
COL13A1-213ENST00000520267 ZNF668Q96K58 619 aaPredicted RBP27.45■■□□□ 1.98
COL13A1-213ENST00000520267 PODXLO00592 558 aa27.44■■□□□ 1.98
COL13A1-213ENST00000520267 ABLIM1O14639 778 aa27.44■■□□□ 1.98
COL13A1-213ENST00000520267 FSCN2O14926 492 aa27.44■■□□□ 1.98
COL13A1-213ENST00000520267 WDR78Q5VTH9 848 aa27.44■■□□□ 1.98
COL13A1-213ENST00000520267 DAB2IPQ5VWQ8 1189 aa27.44■■□□□ 1.98
COL13A1-213ENST00000520267 TRIM72Q6ZMU5 477 aa27.44■■□□□ 1.98
COL13A1-213ENST00000520267 CCDC105Q8IYK2 499 aa27.44■■□□□ 1.98
COL13A1-213ENST00000520267 OPTNQ96CV9 577 aa27.44■■□□□ 1.98
COL13A1-213ENST00000520267 MTMR12Q9C0I1 747 aa27.44■■□□□ 1.98
COL13A1-213ENST00000520267 ADAM22Q9P0K1 906 aa27.44■■□□□ 1.98
COL13A1-213ENST00000520267 MAPK6Q16659 721 aa27.44■■□□□ 1.98
COL13A1-213ENST00000520267 CCDC62Q6P9F0 684 aa27.44■■□□□ 1.98
COL13A1-213ENST00000520267 ZBTB8OSQ8IWT0 167 aa27.44■■□□□ 1.98
COL13A1-213ENST00000520267 UBR7Q8N806 425 aa27.44■■□□□ 1.98
COL13A1-213ENST00000520267 C12orf50Q8NA57 414 aaPredicted RBP27.44■■□□□ 1.98
COL13A1-213ENST00000520267 PTPN22Q9Y2R2 807 aa27.44■■□□□ 1.98
COL13A1-213ENST00000520267 OGTO15294 1046 aa27.43■■□□□ 1.98
COL13A1-213ENST00000520267 ASS1P00966 412 aaKnown RBP27.43■■□□□ 1.98
COL13A1-213ENST00000520267 GJB1P08034 283 aa27.43■■□□□ 1.98
COL13A1-213ENST00000520267 SLC1A1P43005 524 aa27.43■■□□□ 1.98
COL13A1-213ENST00000520267 LIN9Q5TKA1 542 aa27.43■■□□□ 1.98
COL13A1-213ENST00000520267 RHPN2Q8IUC4 686 aa27.43■■□□□ 1.98
COL13A1-213ENST00000520267 ZBTB10Q96DT7 871 aa27.43■■□□□ 1.98
COL13A1-213ENST00000520267 RABEP2Q9H5N1 569 aa27.43■■□□□ 1.98
COL13A1-213ENST00000520267 LRRC4CQ9HCJ2 640 aa27.43■■□□□ 1.98
COL13A1-213ENST00000520267 GAS2O43903 313 aaKnown RBP27.43■■□□□ 1.98
COL13A1-213ENST00000520267 ERLIN2O94905 339 aa27.43■■□□□ 1.98
COL13A1-213ENST00000520267 NF2P35240 595 aa27.43■■□□□ 1.98
COL13A1-213ENST00000520267 MYL6P60660 151 aa27.43■■□□□ 1.98
COL13A1-213ENST00000520267 MCL1Q07820 350 aa27.43■■□□□ 1.98
COL13A1-213ENST00000520267 GRM1Q13255 1194 aa27.43■■□□□ 1.98
COL13A1-213ENST00000520267 GPAT2Q6NUI2 795 aa27.43■■□□□ 1.98
COL13A1-213ENST00000520267 MMS22LQ6ZRQ5 1243 aa27.43■■□□□ 1.98
COL13A1-213ENST00000520267 IMPG2Q9BZV3 1241 aa27.43■■□□□ 1.98
COL13A1-213ENST00000520267 FHDC1Q9C0D6 1143 aaPredicted RBP27.43■■□□□ 1.98
COL13A1-213ENST00000520267 CPSF3Q9UKF6 684 aaKnown RBP27.43■■□□□ 1.98
COL13A1-213ENST00000520267 PROSCO94903 275 aa27.42■■□□□ 1.98
COL13A1-213ENST00000520267 AP3M2P53677 418 aa27.42■■□□□ 1.98
COL13A1-213ENST00000520267 PTP4A2Q12974 167 aa27.42■■□□□ 1.98
COL13A1-213ENST00000520267 PHF13Q86YI8 300 aaPredicted RBP27.42■■□□□ 1.98
COL13A1-213ENST00000520267 C1orf54Q8WWF1 131 aa27.42■■□□□ 1.98
COL13A1-213ENST00000520267 HERPUD2Q9BSE4 406 aa27.42■■□□□ 1.98
COL13A1-213ENST00000520267 PLVAPQ9BX97 442 aa27.42■■□□□ 1.98
COL13A1-213ENST00000520267 EPB41L4BQ9H329 900 aa27.42■■□□□ 1.98
COL13A1-213ENST00000520267 LRRC19Q9H756 370 aa27.42■■□□□ 1.98
COL13A1-213ENST00000520267 PDGFCQ9NRA1 345 aa27.42■■□□□ 1.98
COL13A1-213ENST00000520267 RSPH14Q9UHP6 348 aa27.42■■□□□ 1.98
COL13A1-213ENST00000520267 OSBPP22059 807 aa27.42■■□□□ 1.98
COL13A1-213ENST00000520267 FNTAP49354 379 aa27.42■■□□□ 1.98
COL13A1-213ENST00000520267 ZNF132P52740 706 aa27.42■■□□□ 1.98
COL13A1-213ENST00000520267 MAMLD1Q13495 774 aa27.42■■□□□ 1.98
COL13A1-213ENST00000520267 SKIDA1Q1XH10 827 aa27.42■■□□□ 1.98
COL13A1-213ENST00000520267 SPDYCQ5MJ68 293 aa27.42■■□□□ 1.98
COL13A1-213ENST00000520267 DDX27Q96GQ7 796 aaKnown RBP27.42■■□□□ 1.98
COL13A1-213ENST00000520267 RUNDC3BQ96NL0 473 aa27.42■■□□□ 1.98
COL13A1-213ENST00000520267 RUFY4Q6ZNE9 571 aa27.41■■□□□ 1.98
COL13A1-213ENST00000520267 ZNF606Q8WXB4 792 aa27.41■■□□□ 1.98
COL13A1-213ENST00000520267 MGAMO43451 1857 aa27.41■■□□□ 1.98
COL13A1-213ENST00000520267 O00370 1275 aa27.41■■□□□ 1.98
COL13A1-213ENST00000520267 POTEJP0CG39 1038 aa27.41■■□□□ 1.98
COL13A1-213ENST00000520267 TXNP10599 105 aaKnown RBP27.41■■□□□ 1.98
COL13A1-213ENST00000520267 GUCY1A3Q02108 690 aa27.41■■□□□ 1.98
COL13A1-213ENST00000520267 VCPIP1Q96JH7 1222 aa27.41■■□□□ 1.98
COL13A1-213ENST00000520267 NLRP4Q96MN2 994 aa27.41■■□□□ 1.98
COL13A1-213ENST00000520267 BCCIPQ9P287 314 aaKnown RBP eCLIP27.41■■□□□ 1.98
COL13A1-213ENST00000520267 EVPLQ92817 2033 aa27.4■■□□□ 1.98
COL13A1-213ENST00000520267 GJB6O95452 261 aa27.4■■□□□ 1.98
COL13A1-213ENST00000520267 PMS2P54278 862 aa27.4■■□□□ 1.98
COL13A1-213ENST00000520267 PLEKHA7Q6IQ23 1121 aa27.4■■□□□ 1.98
COL13A1-213ENST00000520267 EXOC8Q8IYI6 725 aa27.4■■□□□ 1.98
COL13A1-213ENST00000520267 C2orf40Q9H1Z8 148 aa27.4■■□□□ 1.98
COL13A1-213ENST00000520267 A6NNZ2 444 aa27.39■■□□□ 1.98
COL13A1-213ENST00000520267 HPDP32754 393 aaPredicted RBP27.39■■□□□ 1.98
COL13A1-213ENST00000520267 DUOXA2Q1HG44 320 aa27.39■■□□□ 1.98
COL13A1-213ENST00000520267 TUBB8Q3ZCM7 444 aa27.39■■□□□ 1.98
COL13A1-213ENST00000520267 SGO2Q562F6 1265 aa27.39■■□□□ 1.98
COL13A1-213ENST00000520267 BCAS4Q8TDM0 211 aa27.39■■□□□ 1.98
COL13A1-213ENST00000520267 ANK1P16157 1881 aa27.39■■□□□ 1.98
COL13A1-213ENST00000520267 B4GALT5O43286 388 aa27.39■■□□□ 1.98
COL13A1-213ENST00000520267 CD58P19256 250 aa27.39■■□□□ 1.98
COL13A1-213ENST00000520267 PROZP22891 400 aa27.39■■□□□ 1.98
COL13A1-213ENST00000520267 SNX1Q13596 522 aa27.39■■□□□ 1.98
COL13A1-213ENST00000520267 FASTKD5Q7L8L6 764 aaKnown RBP27.39■■□□□ 1.98
COL13A1-213ENST00000520267 CDR2LQ86X02 465 aaPredicted RBP27.39■■□□□ 1.98
COL13A1-213ENST00000520267 THNSL1Q8IYQ7 743 aa27.39■■□□□ 1.98
COL13A1-213ENST00000520267 SMARCAD1Q9H4L7 1026 aa27.39■■□□□ 1.98
COL13A1-213ENST00000520267 MRPL47Q9HD33 250 aaKnown RBP27.39■■□□□ 1.98
COL13A1-213ENST00000520267 PTPRHQ9HD43 1115 aa27.39■■□□□ 1.98
COL13A1-213ENST00000520267 CHST7Q9NS84 486 aa27.39■■□□□ 1.98
COL13A1-213ENST00000520267 SBDSQ9Y3A5 250 aaKnown RBP eCLIP27.39■■□□□ 1.98
COL13A1-213ENST00000520267 SRCAPQ6ZRS2 3230 aa27.39■■□□□ 1.97
COL13A1-213ENST00000520267 PASKQ96RG2 1323 aa27.39■■□□□ 1.97
COL13A1-213ENST00000520267 ECEL1O95672 775 aa27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms