RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 KCTD3Q9Y597 815 aa6.42□□□□□ -1.38
HMGB1P46-201ENST00000520062 SLC4A7Q9Y6M7 1214 aa6.42□□□□□ -1.38
HMGB1P46-201ENST00000520062 ZMYM3Q14202 1370 aa6.42□□□□□ -1.38
HMGB1P46-201ENST00000520062 CXorf49A8MYA2 514 aaPredicted RBP6.41□□□□□ -1.38
HMGB1P46-201ENST00000520062 FFAR3O14843 346 aa6.41□□□□□ -1.38
HMGB1P46-201ENST00000520062 NPHP1O15259 732 aa6.41□□□□□ -1.38
HMGB1P46-201ENST00000520062 TBC1D4O60343 1298 aa6.41□□□□□ -1.38
HMGB1P46-201ENST00000520062 AMHP03971 560 aa6.41□□□□□ -1.38
HMGB1P46-201ENST00000520062 RARBP10826 455 aa6.41□□□□□ -1.38
HMGB1P46-201ENST00000520062 ALAS1P13196 640 aa6.41□□□□□ -1.38
HMGB1P46-201ENST00000520062 KCNJ5P48544 419 aa6.41□□□□□ -1.38
HMGB1P46-201ENST00000520062 HSPA7P48741 367 aa6.41□□□□□ -1.38
HMGB1P46-201ENST00000520062 PPM1FP49593 454 aaPredicted RBP6.41□□□□□ -1.38
HMGB1P46-201ENST00000520062 MAPK10P53779 464 aa6.41□□□□□ -1.38
HMGB1P46-201ENST00000520062 SLC13A2Q13183 592 aa6.41□□□□□ -1.38
HMGB1P46-201ENST00000520062 ARL13BQ3SXY8 428 aa6.41□□□□□ -1.38
HMGB1P46-201ENST00000520062 ZNF385BQ569K4 471 aa6.41□□□□□ -1.38
HMGB1P46-201ENST00000520062 PGBD2Q6P3X8 592 aa6.41□□□□□ -1.38
HMGB1P46-201ENST00000520062 ZNF365Q70YC5 407 aa6.41□□□□□ -1.38
HMGB1P46-201ENST00000520062 AOPEPQ8N6M6 819 aa6.41□□□□□ -1.38
HMGB1P46-201ENST00000520062 FANCBQ8NB91 859 aa6.41□□□□□ -1.38
HMGB1P46-201ENST00000520062 GIMAP8Q8ND71 665 aaPredicted RBP6.41□□□□□ -1.38
HMGB1P46-201ENST00000520062 CFHR4Q92496 578 aa6.41□□□□□ -1.38
HMGB1P46-201ENST00000520062 MAML1Q92585 1016 aa6.41□□□□□ -1.38
HMGB1P46-201ENST00000520062 DDX17Q92841 729 aaKnown RBP6.41□□□□□ -1.38
HMGB1P46-201ENST00000520062 DACT3Q96B18 629 aaPredicted RBP6.41□□□□□ -1.38
HMGB1P46-201ENST00000520062 IQCDQ96DY2 449 aa6.41□□□□□ -1.38
HMGB1P46-201ENST00000520062 PPP1R16BQ96T49 567 aa6.41□□□□□ -1.38
HMGB1P46-201ENST00000520062 NDC1Q9BTX1 674 aa6.41□□□□□ -1.38
HMGB1P46-201ENST00000520062 ISCA1Q9BUE6 129 aa6.41□□□□□ -1.38
HMGB1P46-201ENST00000520062 EIF2AQ9BY44 585 aaKnown RBP6.41□□□□□ -1.38
HMGB1P46-201ENST00000520062 PCDHGB2Q9Y5G2 931 aa6.41□□□□□ -1.38
HMGB1P46-201ENST00000520062 TCAF2A6NFQ2 919 aa6.4□□□□□ -1.38
HMGB1P46-201ENST00000520062 PRSS29PA6NIE9 313 aa6.4□□□□□ -1.38
HMGB1P46-201ENST00000520062 HAUS5O94927 633 aa6.4□□□□□ -1.38
HMGB1P46-201ENST00000520062 GNAI2P04899 355 aa6.4□□□□□ -1.38
HMGB1P46-201ENST00000520062 ANXA2P07355 339 aaKnown RBP6.4□□□□□ -1.38
HMGB1P46-201ENST00000520062 SBK3P0C264 359 aa6.4□□□□□ -1.38
HMGB1P46-201ENST00000520062 FGFR2P21802 821 aa6.4□□□□□ -1.38
HMGB1P46-201ENST00000520062 CCT5P48643 541 aa6.4□□□□□ -1.38
HMGB1P46-201ENST00000520062 CLRN1P58418 232 aa6.4□□□□□ -1.38
HMGB1P46-201ENST00000520062 RPS16P62249 146 aaKnown RBP6.4□□□□□ -1.38
HMGB1P46-201ENST00000520062 MXRA7P84157 204 aa6.4□□□□□ -1.38
HMGB1P46-201ENST00000520062 MESP2Q0VG99 397 aa6.4□□□□□ -1.38
HMGB1P46-201ENST00000520062 RAB32Q13637 225 aa6.4□□□□□ -1.38
HMGB1P46-201ENST00000520062 BLMHQ13867 455 aa6.4□□□□□ -1.38
HMGB1P46-201ENST00000520062 STARD3Q14849 445 aa6.4□□□□□ -1.38
HMGB1P46-201ENST00000520062 RNF151Q2KHN1 245 aa6.4□□□□□ -1.38
HMGB1P46-201ENST00000520062 MPEG1Q2M385 716 aa6.4□□□□□ -1.38
HMGB1P46-201ENST00000520062 SLC35G1Q2M3R5 365 aa6.4□□□□□ -1.38
HMGB1P46-201ENST00000520062 C3orf38Q5JPI3 329 aa6.4□□□□□ -1.38
HMGB1P46-201ENST00000520062 LMBRD2Q68DH5 695 aaPredicted RBP6.4□□□□□ -1.38
HMGB1P46-201ENST00000520062 BEND5Q7L4P6 421 aa6.4□□□□□ -1.38
HMGB1P46-201ENST00000520062 MICU3Q86XE3 530 aa6.4□□□□□ -1.38
HMGB1P46-201ENST00000520062 ZNF761Q86XN6 746 aaPredicted RBP6.4□□□□□ -1.38
HMGB1P46-201ENST00000520062 ZNF354CQ86Y25 554 aa6.4□□□□□ -1.38
HMGB1P46-201ENST00000520062 CCT6BQ92526 530 aa6.4□□□□□ -1.38
HMGB1P46-201ENST00000520062 FAM84AQ96KN4 292 aa6.4□□□□□ -1.38
HMGB1P46-201ENST00000520062 SNX22Q96L94 193 aa6.4□□□□□ -1.38
HMGB1P46-201ENST00000520062 NCDNQ9UBB6 729 aa6.4□□□□□ -1.38
HMGB1P46-201ENST00000520062 CEP83Q9Y592 693 aa6.4□□□□□ -1.38
HMGB1P46-201ENST00000520062 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.4□□□□□ -1.38
HMGB1P46-201ENST00000520062 DGKBQ9Y6T7 804 aa6.4□□□□□ -1.38
HMGB1P46-201ENST00000520062 MBD3L4A6NDZ8 208 aaPredicted RBP6.39□□□□□ -1.39
HMGB1P46-201ENST00000520062 MBD3L3A6NE82 208 aaPredicted RBP6.39□□□□□ -1.39
HMGB1P46-201ENST00000520062 MROH6A6NGR9 719 aa6.39□□□□□ -1.39
HMGB1P46-201ENST00000520062 CLCA1A8K7I4 914 aa6.39□□□□□ -1.39
HMGB1P46-201ENST00000520062 FFAR2O15552 330 aa6.39□□□□□ -1.39
HMGB1P46-201ENST00000520062 THAP12O43422 761 aa6.39□□□□□ -1.39
HMGB1P46-201ENST00000520062 SH3BP5O60239 455 aa6.39□□□□□ -1.39
HMGB1P46-201ENST00000520062 TLR5O60602 858 aa6.39□□□□□ -1.39
HMGB1P46-201ENST00000520062 PLA2G6O60733 806 aa6.39□□□□□ -1.39
HMGB1P46-201ENST00000520062 GJB1P08034 283 aa6.39□□□□□ -1.39
HMGB1P46-201ENST00000520062 HARSP12081 509 aaKnown RBP6.39□□□□□ -1.39
HMGB1P46-201ENST00000520062 EEF1GP26641 437 aaKnown RBP6.39□□□□□ -1.39
HMGB1P46-201ENST00000520062 CHKAP35790 457 aa6.39□□□□□ -1.39
HMGB1P46-201ENST00000520062 NOMO3P69849 1222 aa6.39□□□□□ -1.39
HMGB1P46-201ENST00000520062 POU6F2P78424 691 aaPredicted RBP6.39□□□□□ -1.39
HMGB1P46-201ENST00000520062 ACAP1Q15027 740 aa6.39□□□□□ -1.39
HMGB1P46-201ENST00000520062 KLHDC7AQ5VTJ3 777 aa6.39□□□□□ -1.39
HMGB1P46-201ENST00000520062 ZNF529Q6P280 563 aa6.39□□□□□ -1.39
HMGB1P46-201ENST00000520062 CCDC174Q6PII3 467 aa6.39□□□□□ -1.39
HMGB1P46-201ENST00000520062 ATG14Q6ZNE5 492 aa6.39□□□□□ -1.39
HMGB1P46-201ENST00000520062 CATSPERGQ6ZRH7 1159 aa6.39□□□□□ -1.39
HMGB1P46-201ENST00000520062 DOK3Q7L591 496 aa6.39□□□□□ -1.39
HMGB1P46-201ENST00000520062 FAM124AQ86V42 546 aa6.39□□□□□ -1.39
HMGB1P46-201ENST00000520062 KBTBD2Q8IY47 623 aa6.39□□□□□ -1.39
HMGB1P46-201ENST00000520062 SDR16C5Q8N3Y7 309 aa6.39□□□□□ -1.39
HMGB1P46-201ENST00000520062 LINC01356Q8N9X3 169 aa6.39□□□□□ -1.39
HMGB1P46-201ENST00000520062 ZNF527Q8NB42 609 aa6.39□□□□□ -1.39
HMGB1P46-201ENST00000520062 MYOCQ99972 504 aa6.39□□□□□ -1.39
HMGB1P46-201ENST00000520062 STK33Q9BYT3 514 aa6.39□□□□□ -1.39
HMGB1P46-201ENST00000520062 GPR35Q9HC97 309 aa6.39□□□□□ -1.39
HMGB1P46-201ENST00000520062 CD320Q9NPF0 282 aa6.39□□□□□ -1.39
HMGB1P46-201ENST00000520062 SLAMF7Q9NQ25 335 aa6.39□□□□□ -1.39
HMGB1P46-201ENST00000520062 CASS4Q9NQ75 786 aa6.39□□□□□ -1.39
HMGB1P46-201ENST00000520062 PLEKHM1Q9Y4G2 1056 aa6.39□□□□□ -1.39
HMGB1P46-201ENST00000520062 UBE2QL1A1L167 161 aa6.38□□□□□ -1.39
HMGB1P46-201ENST00000520062 GOLGA6L3A6NEY3 463 aa6.38□□□□□ -1.39
HMGB1P46-201ENST00000520062 HNRNPDLO14979 420 aaKnown RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms