RNA–Protein interactions for RNA: ENST00000519596.5

PABPC1-211, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-211ENST00000519596 SKA1Q96BD8 255 aa3.11□□□□□ -1.91
PABPC1-211ENST00000519596 PAWRQ96IZ0 340 aaKnown RBP3.11□□□□□ -1.91
PABPC1-211ENST00000519596 MPP4Q96JB8 637 aa3.11□□□□□ -1.91
PABPC1-211ENST00000519596 COQ10AQ96MF6 247 aa3.11□□□□□ -1.91
PABPC1-211ENST00000519596 IWS1Q96ST2 819 aa3.11□□□□□ -1.91
PABPC1-211ENST00000519596 ENKD1Q9H0I2 346 aa3.11□□□□□ -1.91
PABPC1-211ENST00000519596 ZNF768Q9H5H4 540 aaKnown RBP3.11□□□□□ -1.91
PABPC1-211ENST00000519596 CAAP1Q9H8G2 361 aa3.11□□□□□ -1.91
PABPC1-211ENST00000519596 RSAD1Q9HA92 442 aa3.11□□□□□ -1.91
PABPC1-211ENST00000519596 VTA1Q9NP79 307 aa3.11□□□□□ -1.91
PABPC1-211ENST00000519596 RBM28Q9NW13 759 aaKnown RBP3.11□□□□□ -1.91
PABPC1-211ENST00000519596 RNF181Q9P0P0 153 aa3.11□□□□□ -1.91
PABPC1-211ENST00000519596 TMPRSS11EQ9UL52 423 aa3.11□□□□□ -1.91
PABPC1-211ENST00000519596 TMCC3Q9ULS5 477 aa3.11□□□□□ -1.91
PABPC1-211ENST00000519596 ATP8A1Q9Y2Q0 1164 aa3.11□□□□□ -1.91
PABPC1-211ENST00000519596 INSL6Q9Y581 213 aa3.11□□□□□ -1.91
PABPC1-211ENST00000519596 SPATA31A6Q5VVP1 1343 aa3.11□□□□□ -1.91
PABPC1-211ENST00000519596 WASHC2AQ641Q2 1341 aa3.11□□□□□ -1.91
PABPC1-211ENST00000519596 TMEM200CA6NKL6 621 aa3.1□□□□□ -1.91
PABPC1-211ENST00000519596 AHRRA9YTQ3 701 aa3.1□□□□□ -1.91
PABPC1-211ENST00000519596 B5MCH6 92 aa3.1□□□□□ -1.91
PABPC1-211ENST00000519596 LPXNO60711 386 aa3.1□□□□□ -1.91
PABPC1-211ENST00000519596 PRAMEF4O60810 478 aa3.1□□□□□ -1.91
PABPC1-211ENST00000519596 SCGB1D2O95969 90 aa3.1□□□□□ -1.91
PABPC1-211ENST00000519596 ERBB2P04626 1255 aa3.1□□□□□ -1.91
PABPC1-211ENST00000519596 PFKMP08237 780 aa3.1□□□□□ -1.91
PABPC1-211ENST00000519596 POU3F3P20264 500 aaPredicted RBP3.1□□□□□ -1.91
PABPC1-211ENST00000519596 PSMA3P25788 255 aa3.1□□□□□ -1.91
PABPC1-211ENST00000519596 CNGA1P29973 690 aa3.1□□□□□ -1.91
PABPC1-211ENST00000519596 CXCR5P32302 372 aa3.1□□□□□ -1.91
PABPC1-211ENST00000519596 PIK3CAP42336 1068 aa3.1□□□□□ -1.91
PABPC1-211ENST00000519596 CDKN1CP49918 316 aaPredicted RBP3.1□□□□□ -1.91
PABPC1-211ENST00000519596 HMGN5P82970 282 aaKnown RBP3.1□□□□□ -1.91
PABPC1-211ENST00000519596 NHLH2Q02577 135 aa3.1□□□□□ -1.91
PABPC1-211ENST00000519596 NUCB1Q02818 461 aa3.1□□□□□ -1.91
PABPC1-211ENST00000519596 PPARAQ07869 468 aa3.1□□□□□ -1.91
PABPC1-211ENST00000519596 TRIM25Q14258 630 aaKnown RBP3.1□□□□□ -1.91
PABPC1-211ENST00000519596 KIF22Q14807 665 aa3.1□□□□□ -1.91
PABPC1-211ENST00000519596 SPDYE7PQ495Y7 208 aa3.1□□□□□ -1.91
PABPC1-211ENST00000519596 CT83Q5H943 113 aa3.1□□□□□ -1.91
PABPC1-211ENST00000519596 WDR45BQ5MNZ6 344 aa3.1□□□□□ -1.91
PABPC1-211ENST00000519596 ANO1Q5XXA6 986 aa3.1□□□□□ -1.91
PABPC1-211ENST00000519596 TSHZ3Q63HK5 1081 aa3.1□□□□□ -1.91
PABPC1-211ENST00000519596 ARMC6Q6NXE6 501 aa3.1□□□□□ -1.91
PABPC1-211ENST00000519596 CCDC62Q6P9F0 684 aa3.1□□□□□ -1.91
PABPC1-211ENST00000519596 DRICH1Q6PGQ1 229 aaPredicted RBP3.1□□□□□ -1.91
PABPC1-211ENST00000519596 MMS22LQ6ZRQ5 1243 aa3.1□□□□□ -1.91
PABPC1-211ENST00000519596 FRMD7Q6ZUT3 714 aa3.1□□□□□ -1.91
PABPC1-211ENST00000519596 RD3Q7Z3Z2 195 aa3.1□□□□□ -1.91
PABPC1-211ENST00000519596 C14orf80Q86SX3 495 aa3.1□□□□□ -1.91
PABPC1-211ENST00000519596 LILRA3Q8N6C8 439 aaPredicted RBP3.1□□□□□ -1.91
PABPC1-211ENST00000519596 ARL6IP6Q8N6S5 226 aa3.1□□□□□ -1.91
PABPC1-211ENST00000519596 ENAHQ8N8S7 591 aaPredicted RBP3.1□□□□□ -1.91
PABPC1-211ENST00000519596 CPEB3Q8NE35 698 aaKnown RBP3.1□□□□□ -1.91
PABPC1-211ENST00000519596 OR10H5Q8NGA6 315 aa3.1□□□□□ -1.91
PABPC1-211ENST00000519596 NTN5Q8WTR8 489 aaPredicted RBP3.1□□□□□ -1.91
PABPC1-211ENST00000519596 SLC9A6Q92581 669 aa3.1□□□□□ -1.91
PABPC1-211ENST00000519596 SLC5A5Q92911 643 aa3.1□□□□□ -1.91
PABPC1-211ENST00000519596 USP7Q93009 1102 aa3.1□□□□□ -1.91
PABPC1-211ENST00000519596 CCDC34Q96HJ3 373 aa3.1□□□□□ -1.91
PABPC1-211ENST00000519596 SCLT1Q96NL6 688 aa3.1□□□□□ -1.91
PABPC1-211ENST00000519596 FDXACB1Q9BRP7 624 aaPredicted RBP3.1□□□□□ -1.91
PABPC1-211ENST00000519596 HERPUD2Q9BSE4 406 aa3.1□□□□□ -1.91
PABPC1-211ENST00000519596 LSM14BQ9BX40 385 aaKnown RBP3.1□□□□□ -1.91
PABPC1-211ENST00000519596 CPEB1Q9BZB8 566 aaKnown RBP3.1□□□□□ -1.91
PABPC1-211ENST00000519596 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.1□□□□□ -1.91
PABPC1-211ENST00000519596 WNT8AQ9H1J5 351 aa3.1□□□□□ -1.91
PABPC1-211ENST00000519596 PTPRHQ9HD43 1115 aa3.1□□□□□ -1.91
PABPC1-211ENST00000519596 TOPORSQ9NS56 1045 aaPredicted RBP3.1□□□□□ -1.91
PABPC1-211ENST00000519596 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.1□□□□□ -1.91
PABPC1-211ENST00000519596 LUZP4Q9P127 313 aa3.1□□□□□ -1.91
PABPC1-211ENST00000519596 PGAP2Q9UHJ9 254 aa3.1□□□□□ -1.91
PABPC1-211ENST00000519596 TAGLN3Q9UI15 199 aa3.1□□□□□ -1.91
PABPC1-211ENST00000519596 EDARQ9UNE0 448 aa3.1□□□□□ -1.91
PABPC1-211ENST00000519596 SMC3Q9UQE7 1217 aa3.1□□□□□ -1.91
PABPC1-211ENST00000519596 NOC2LQ9Y3T9 749 aaKnown RBP3.1□□□□□ -1.91
PABPC1-211ENST00000519596 POLR2AP24928 1970 aaKnown RBP3.1□□□□□ -1.91
PABPC1-211ENST00000519596 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.09□□□□□ -1.91
PABPC1-211ENST00000519596 SHTN1A0MZ66 631 aa3.09□□□□□ -1.91
PABPC1-211ENST00000519596 GTPBP10A4D1E9 387 aaKnown RBP3.09□□□□□ -1.91
PABPC1-211ENST00000519596 TRIM64CA6NLI5 447 aa3.09□□□□□ -1.91
PABPC1-211ENST00000519596 CHL1O00533 1208 aa3.09□□□□□ -1.91
PABPC1-211ENST00000519596 ZEB2O60315 1214 aa3.09□□□□□ -1.91
PABPC1-211ENST00000519596 SEC24DO94855 1032 aaPredicted RBP3.09□□□□□ -1.91
PABPC1-211ENST00000519596 EYA4O95677 639 aa3.09□□□□□ -1.91
PABPC1-211ENST00000519596 CFBP00751 764 aa3.09□□□□□ -1.91
PABPC1-211ENST00000519596 IGHDP01880 384 aa3.09□□□□□ -1.91
PABPC1-211ENST00000519596 LPLP06858 475 aa3.09□□□□□ -1.91
PABPC1-211ENST00000519596 LTA4HP09960 611 aaKnown RBP3.09□□□□□ -1.91
PABPC1-211ENST00000519596 SRGNP10124 158 aa3.09□□□□□ -1.91
PABPC1-211ENST00000519596 ITGB6P18564 788 aa3.09□□□□□ -1.91
PABPC1-211ENST00000519596 DDX6P26196 483 aaKnown RBP eCLIP3.09□□□□□ -1.91
PABPC1-211ENST00000519596 TSPAN7P41732 249 aa3.09□□□□□ -1.91
PABPC1-211ENST00000519596 EIF5P55010 431 aaKnown RBP3.09□□□□□ -1.91
PABPC1-211ENST00000519596 MANFP55145 182 aaKnown RBP3.09□□□□□ -1.91
PABPC1-211ENST00000519596 ELLP55199 621 aaPredicted RBP3.09□□□□□ -1.91
PABPC1-211ENST00000519596 FAM189BP81408 668 aa3.09□□□□□ -1.91
PABPC1-211ENST00000519596 MEF2AQ02078 507 aaPredicted RBP3.09□□□□□ -1.91
PABPC1-211ENST00000519596 CALD1Q05682 793 aaKnown RBP3.09□□□□□ -1.91
PABPC1-211ENST00000519596 UBE3CQ15386 1083 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms