RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 ALDH7A1P49419 539 aaKnown RBP15.23■□□□□ 0.03
SDC2-203ENST00000519587 AFF1P51825 1210 aaKnown RBP15.23■□□□□ 0.03
SDC2-203ENST00000519587 UBXN1Q04323 297 aa15.23■□□□□ 0.03
SDC2-203ENST00000519587 SOX4Q06945 474 aaPredicted RBP15.23■□□□□ 0.03
SDC2-203ENST00000519587 NAB2Q15742 525 aa15.23■□□□□ 0.03
SDC2-203ENST00000519587 EXOC3L4Q17RC7 722 aa15.23■□□□□ 0.03
SDC2-203ENST00000519587 ZNF699Q32M78 642 aa15.23■□□□□ 0.03
SDC2-203ENST00000519587 SV2CQ496J9 727 aa15.23■□□□□ 0.03
SDC2-203ENST00000519587 CBWD6Q4V339 395 aa15.23■□□□□ 0.03
SDC2-203ENST00000519587 WDR44Q5JSH3 913 aa15.23■□□□□ 0.03
SDC2-203ENST00000519587 CBWD3Q5JTY5 395 aa15.23■□□□□ 0.03
SDC2-203ENST00000519587 CBWD5Q5RIA9 395 aa15.23■□□□□ 0.03
SDC2-203ENST00000519587 C9orf57Q5W0N0 161 aa15.23■□□□□ 0.03
SDC2-203ENST00000519587 FAM109BQ6ICB4 259 aaPredicted RBP15.23■□□□□ 0.03
SDC2-203ENST00000519587 C15orf39Q6ZRI6 1047 aa15.23■□□□□ 0.03
SDC2-203ENST00000519587 APTXQ7Z2E3 356 aaKnown RBP15.23■□□□□ 0.03
SDC2-203ENST00000519587 ZNF516Q92618 1163 aa15.23■□□□□ 0.03
SDC2-203ENST00000519587 ZNF558Q96NG5 402 aa15.23■□□□□ 0.03
SDC2-203ENST00000519587 CXCL16Q9H2A7 254 aa15.23■□□□□ 0.03
SDC2-203ENST00000519587 MIOSQ9NXC5 875 aa15.23■□□□□ 0.03
SDC2-203ENST00000519587 IFNKQ9P0W0 207 aa15.23■□□□□ 0.03
SDC2-203ENST00000519587 COQ4Q9Y3A0 265 aa15.23■□□□□ 0.03
SDC2-203ENST00000519587 RWDD3Q9Y3V2 267 aa15.23■□□□□ 0.03
SDC2-203ENST00000519587 PCDHA11Q9Y5I1 949 aa15.23■□□□□ 0.03
SDC2-203ENST00000519587 ANO9A1A5B4 782 aa15.22■□□□□ 0.03
SDC2-203ENST00000519587 ARHGEF37A1IGU5 675 aa15.22■□□□□ 0.03
SDC2-203ENST00000519587 P4HA1P13674 534 aa15.22■□□□□ 0.03
SDC2-203ENST00000519587 OR1G1P47890 313 aa15.22■□□□□ 0.03
SDC2-203ENST00000519587 TAF6P49848 677 aa15.22■□□□□ 0.03
SDC2-203ENST00000519587 GUCY2FP51841 1108 aa15.22■□□□□ 0.03
SDC2-203ENST00000519587 RAB30Q15771 203 aa15.22■□□□□ 0.03
SDC2-203ENST00000519587 COLGALT2Q8IYK4 626 aa15.22■□□□□ 0.03
SDC2-203ENST00000519587 SP7Q8TDD2 431 aaPredicted RBP15.22■□□□□ 0.03
SDC2-203ENST00000519587 TAS1R2Q8TE23 839 aa15.22■□□□□ 0.03
SDC2-203ENST00000519587 COLEC11Q9BWP8 271 aa15.22■□□□□ 0.03
SDC2-203ENST00000519587 TRIM5Q9C035 493 aa15.22■□□□□ 0.03
SDC2-203ENST00000519587 NRDE2Q9H7Z3 1164 aa15.22■□□□□ 0.03
SDC2-203ENST00000519587 GOLGA2P5Q9HBQ8 144 aa15.22■□□□□ 0.03
SDC2-203ENST00000519587 RTN4Q9NQC3 1192 aaKnown RBP15.22■□□□□ 0.03
SDC2-203ENST00000519587 RAB20Q9NX57 234 aa15.22■□□□□ 0.03
SDC2-203ENST00000519587 SIX4Q9UIU6 781 aa15.22■□□□□ 0.03
SDC2-203ENST00000519587 MSRAQ9UJ68 235 aa15.22■□□□□ 0.03
SDC2-203ENST00000519587 AGAP1Q9UPQ3 857 aa15.22■□□□□ 0.03
SDC2-203ENST00000519587 SCN1AP35498 2009 aa15.21■□□□□ 0.03
SDC2-203ENST00000519587 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.21■□□□□ 0.03
SDC2-203ENST00000519587 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.21■□□□□ 0.03
SDC2-203ENST00000519587 TMEM189-UBE2V1I3L0A0 370 aa15.21■□□□□ 0.03
SDC2-203ENST00000519587 TRAPPC3O43617 180 aa15.21■□□□□ 0.03
SDC2-203ENST00000519587 DDHD2O94830 711 aa15.21■□□□□ 0.03
SDC2-203ENST00000519587 STAU1O95793 577 aaKnown RBP15.21■□□□□ 0.03
SDC2-203ENST00000519587 CLCNKBP51801 687 aa15.21■□□□□ 0.03
SDC2-203ENST00000519587 NOP14P78316 857 aaKnown RBP15.21■□□□□ 0.03
SDC2-203ENST00000519587 GSE1Q14687 1217 aa15.21■□□□□ 0.03
SDC2-203ENST00000519587 UPP1Q16831 310 aa15.21■□□□□ 0.03
SDC2-203ENST00000519587 SGSM1Q2NKQ1 1148 aa15.21■□□□□ 0.03
SDC2-203ENST00000519587 EPC2Q52LR7 807 aa15.21■□□□□ 0.03
SDC2-203ENST00000519587 DCLRE1AQ6PJP8 1040 aa15.21■□□□□ 0.03
SDC2-203ENST00000519587 ZNF280BQ86YH2 543 aa15.21■□□□□ 0.03
SDC2-203ENST00000519587 HPDLQ96IR7 371 aa15.21■□□□□ 0.03
SDC2-203ENST00000519587 FAM84AQ96KN4 292 aa15.21■□□□□ 0.03
SDC2-203ENST00000519587 FAM81BQ96LP2 452 aa15.21■□□□□ 0.03
SDC2-203ENST00000519587 PCMTD1Q96MG8 357 aaPredicted RBP15.21■□□□□ 0.03
SDC2-203ENST00000519587 FAM161BQ96MY7 647 aa15.21■□□□□ 0.03
SDC2-203ENST00000519587 ERGIC2Q96RQ1 377 aa15.21■□□□□ 0.03
SDC2-203ENST00000519587 INTS2Q9H0H0 1204 aaKnown RBP15.21■□□□□ 0.03
SDC2-203ENST00000519587 GRPEL1Q9HAV7 217 aa15.21■□□□□ 0.03
SDC2-203ENST00000519587 FAN1Q9Y2M0 1017 aa15.21■□□□□ 0.03
SDC2-203ENST00000519587 NUB1Q9Y5A7 615 aa15.21■□□□□ 0.03
SDC2-203ENST00000519587 PCDHB12Q9Y5F1 795 aa15.21■□□□□ 0.03
SDC2-203ENST00000519587 MRPL42Q9Y6G3 142 aaKnown RBP15.21■□□□□ 0.03
SDC2-203ENST00000519587 A0A1W2PQC6 194 aa15.2■□□□□ 0.02
SDC2-203ENST00000519587 FSD2A1L4K1 749 aa15.2■□□□□ 0.02
SDC2-203ENST00000519587 PIRO00625 290 aa15.2■□□□□ 0.02
SDC2-203ENST00000519587 B3GAT3O94766 335 aa15.2■□□□□ 0.02
SDC2-203ENST00000519587 VNN1O95497 513 aa15.2■□□□□ 0.02
SDC2-203ENST00000519587 ASS1P00966 412 aaKnown RBP15.2■□□□□ 0.02
SDC2-203ENST00000519587 ALDH2P05091 517 aa15.2■□□□□ 0.02
SDC2-203ENST00000519587 RFX1P22670 979 aa15.2■□□□□ 0.02
SDC2-203ENST00000519587 SLC11A1P49279 550 aa15.2■□□□□ 0.02
SDC2-203ENST00000519587 BCAR1P56945 870 aa15.2■□□□□ 0.02
SDC2-203ENST00000519587 MYL6P60660 151 aa15.2■□□□□ 0.02
SDC2-203ENST00000519587 TNNC1P63316 161 aa15.2■□□□□ 0.02
SDC2-203ENST00000519587 ELAVL2Q12926 359 aaKnown RBP15.2■□□□□ 0.02
SDC2-203ENST00000519587 ZNF667Q5HYK9 610 aa15.2■□□□□ 0.02
SDC2-203ENST00000519587 COLGALT1Q8NBJ5 622 aa15.2■□□□□ 0.02
SDC2-203ENST00000519587 SAMD11Q96NU1 681 aa15.2■□□□□ 0.02
SDC2-203ENST00000519587 NT5C1BQ96P26 610 aa15.2■□□□□ 0.02
SDC2-203ENST00000519587 CRACR2AQ9BSW2 395 aa15.2■□□□□ 0.02
SDC2-203ENST00000519587 XPO4Q9C0E2 1151 aaKnown RBP15.2■□□□□ 0.02
SDC2-203ENST00000519587 CWH43Q9H720 699 aa15.2■□□□□ 0.02
SDC2-203ENST00000519587 VRTNQ9H8Y1 702 aa15.2■□□□□ 0.02
SDC2-203ENST00000519587 DNAJB4Q9UDY4 337 aa15.2■□□□□ 0.02
SDC2-203ENST00000519587 STK39Q9UEW8 545 aa15.2■□□□□ 0.02
SDC2-203ENST00000519587 PRG3Q9Y2Y8 225 aaPredicted RBP15.2■□□□□ 0.02
SDC2-203ENST00000519587 DAAM1Q9Y4D1 1078 aa15.2■□□□□ 0.02
SDC2-203ENST00000519587 SF3B1O75533 1304 aaKnown RBP eCLIP15.19■□□□□ 0.02
SDC2-203ENST00000519587 B4GALT3O60512 393 aa15.19■□□□□ 0.02
SDC2-203ENST00000519587 KIF4AO95239 1232 aa15.19■□□□□ 0.02
SDC2-203ENST00000519587 COL9A1P20849 921 aa15.19■□□□□ 0.02
SDC2-203ENST00000519587 MRE11P49959 708 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms