RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 ATRNL1Q5VV63 1379 aa6.92□□□□□ -1.3
SQLE-203ENST00000518931 PRR5-ARHGAP8B1AHC4 643 aa6.91□□□□□ -1.3
SQLE-203ENST00000518931 RFPL1O75677 317 aa6.91□□□□□ -1.3
SQLE-203ENST00000518931 IL33O95760 270 aa6.91□□□□□ -1.3
SQLE-203ENST00000518931 HNRNPCP07910 306 aaKnown RBP eCLIP6.91□□□□□ -1.3
SQLE-203ENST00000518931 PHKG2P15735 406 aa6.91□□□□□ -1.3
SQLE-203ENST00000518931 ALOX15P16050 662 aaPredicted RBP6.91□□□□□ -1.3
SQLE-203ENST00000518931 ACRV1P26436 265 aa6.91□□□□□ -1.3
SQLE-203ENST00000518931 GUCY1A2P33402 732 aa6.91□□□□□ -1.3
SQLE-203ENST00000518931 DEKP35659 375 aaKnown RBP6.91□□□□□ -1.3
SQLE-203ENST00000518931 MAN2A2P49641 1150 aa6.91□□□□□ -1.3
SQLE-203ENST00000518931 NEK3P51956 506 aa6.91□□□□□ -1.3
SQLE-203ENST00000518931 SP140Q13342 867 aa6.91□□□□□ -1.3
SQLE-203ENST00000518931 KRT72Q14CN4 511 aa6.91□□□□□ -1.3
SQLE-203ENST00000518931 BMT2Q1RMZ1 405 aa6.91□□□□□ -1.3
SQLE-203ENST00000518931 C3orf36Q3SXR2 165 aa6.91□□□□□ -1.3
SQLE-203ENST00000518931 TMEM240Q5SV17 173 aa6.91□□□□□ -1.3
SQLE-203ENST00000518931 C1QL3Q5VWW1 255 aa6.91□□□□□ -1.3
SQLE-203ENST00000518931 SPRED1Q7Z699 444 aa6.91□□□□□ -1.3
SQLE-203ENST00000518931 C1orf210Q8IVY1 113 aa6.91□□□□□ -1.3
SQLE-203ENST00000518931 PJA1Q8NG27 643 aa6.91□□□□□ -1.3
SQLE-203ENST00000518931 OR52N2Q8NGI0 321 aa6.91□□□□□ -1.3
SQLE-203ENST00000518931 HSPBAP1Q96EW2 488 aa6.91□□□□□ -1.3
SQLE-203ENST00000518931 STRBPQ96SI9 672 aaKnown RBP6.91□□□□□ -1.3
SQLE-203ENST00000518931 CPEB1Q9BZB8 566 aaKnown RBP6.91□□□□□ -1.3
SQLE-203ENST00000518931 ACTL7AQ9Y615 435 aa6.91□□□□□ -1.3
SQLE-203ENST00000518931 SETD1BQ9UPS6 1966 aaKnown RBP6.91□□□□□ -1.3
SQLE-203ENST00000518931 KRTAP23-1A1A580 65 aa6.9□□□□□ -1.3
SQLE-203ENST00000518931 ANO9A1A5B4 782 aa6.9□□□□□ -1.3
SQLE-203ENST00000518931 KLRG2A4D1S0 409 aaPredicted RBP6.9□□□□□ -1.3
SQLE-203ENST00000518931 GOLGA6L6A8MZA4 724 aa6.9□□□□□ -1.3
SQLE-203ENST00000518931 B5MCH6 92 aa6.9□□□□□ -1.3
SQLE-203ENST00000518931 MTA2O94776 668 aa6.9□□□□□ -1.3
SQLE-203ENST00000518931 AMY1AP04745 511 aa6.9□□□□□ -1.3
SQLE-203ENST00000518931 RAP2AP10114 183 aa6.9□□□□□ -1.3
SQLE-203ENST00000518931 TGFB3P10600 412 aa6.9□□□□□ -1.3
SQLE-203ENST00000518931 INSRRP14616 1297 aa6.9□□□□□ -1.3
SQLE-203ENST00000518931 FPR1P21462 350 aa6.9□□□□□ -1.3
SQLE-203ENST00000518931 PCSK1P29120 753 aa6.9□□□□□ -1.3
SQLE-203ENST00000518931 EIF5P55010 431 aaKnown RBP6.9□□□□□ -1.3
SQLE-203ENST00000518931 NUCB1Q02818 461 aa6.9□□□□□ -1.3
SQLE-203ENST00000518931 PTH1RQ03431 593 aa6.9□□□□□ -1.3
SQLE-203ENST00000518931 NEXNQ0ZGT2 675 aa6.9□□□□□ -1.3
SQLE-203ENST00000518931 CSRP2Q16527 193 aa6.9□□□□□ -1.3
SQLE-203ENST00000518931 NRN1LQ496H8 165 aa6.9□□□□□ -1.3
SQLE-203ENST00000518931 LCE1DQ5T752 114 aa6.9□□□□□ -1.3
SQLE-203ENST00000518931 JAKMIP3Q5VZ66 844 aa6.9□□□□□ -1.3
SQLE-203ENST00000518931 TSHZ3Q63HK5 1081 aa6.9□□□□□ -1.3
SQLE-203ENST00000518931 AFMIDQ63HM1 303 aa6.9□□□□□ -1.3
SQLE-203ENST00000518931 CXorf57Q6NSI4 855 aaKnown RBP6.9□□□□□ -1.3
SQLE-203ENST00000518931 GPRIN1Q7Z2K8 1008 aa6.9□□□□□ -1.3
SQLE-203ENST00000518931 RPAINQ86UA6 219 aa6.9□□□□□ -1.3
SQLE-203ENST00000518931 HSCBQ8IWL3 235 aa6.9□□□□□ -1.3
SQLE-203ENST00000518931 NDUFAF2Q8N183 169 aa6.9□□□□□ -1.3
SQLE-203ENST00000518931 ZGPATQ8N5A5 531 aaKnown RBP6.9□□□□□ -1.3
SQLE-203ENST00000518931 LSM14AQ8ND56 463 aaKnown RBP6.9□□□□□ -1.3
SQLE-203ENST00000518931 RAB24Q969Q5 203 aa6.9□□□□□ -1.3
SQLE-203ENST00000518931 TRIM44Q96DX7 344 aaPredicted RBP6.9□□□□□ -1.3
SQLE-203ENST00000518931 SERINC2Q96SA4 455 aa6.9□□□□□ -1.3
SQLE-203ENST00000518931 SARGQ9BW04 601 aa6.9□□□□□ -1.3
SQLE-203ENST00000518931 CHMP4BQ9H444 224 aaKnown RBP6.9□□□□□ -1.3
SQLE-203ENST00000518931 TCF7L1Q9HCS4 588 aa6.9□□□□□ -1.3
SQLE-203ENST00000518931 RIC8AQ9NPQ8 531 aa6.9□□□□□ -1.3
SQLE-203ENST00000518931 TDP1Q9NUW8 608 aa6.9□□□□□ -1.3
SQLE-203ENST00000518931 OBP2AQ9NY56 170 aa6.9□□□□□ -1.3
SQLE-203ENST00000518931 MOCS1Q9NZB8 636 aa6.9□□□□□ -1.3
SQLE-203ENST00000518931 POGKQ9P215 609 aa6.9□□□□□ -1.3
SQLE-203ENST00000518931 PGAP2Q9UHJ9 254 aa6.9□□□□□ -1.3
SQLE-203ENST00000518931 NOB1Q9ULX3 412 aaKnown RBP6.9□□□□□ -1.3
SQLE-203ENST00000518931 CLCA2Q9UQC9 943 aa6.9□□□□□ -1.3
SQLE-203ENST00000518931 ANKRD6Q9Y2G4 727 aa6.9□□□□□ -1.3
SQLE-203ENST00000518931 MYBBP1AQ9BQG0 1328 aaKnown RBP6.9□□□□□ -1.3
SQLE-203ENST00000518931 PABPN1LA6NDY0 278 aaKnown RBP6.89□□□□□ -1.31
SQLE-203ENST00000518931 PRSS47A8MTI9 375 aa6.89□□□□□ -1.31
SQLE-203ENST00000518931 CXorf49A8MYA2 514 aaPredicted RBP6.89□□□□□ -1.31
SQLE-203ENST00000518931 C1QTNF3-AMACRE9PGA6 284 aa6.89□□□□□ -1.31
SQLE-203ENST00000518931 GPR32O75388 356 aa6.89□□□□□ -1.31
SQLE-203ENST00000518931 ABLIM3O94929 683 aa6.89□□□□□ -1.31
SQLE-203ENST00000518931 ZSCAN20P17040 1043 aaPredicted RBP6.89□□□□□ -1.31
SQLE-203ENST00000518931 TYRP1P17643 537 aa6.89□□□□□ -1.31
SQLE-203ENST00000518931 DDCP20711 480 aa6.89□□□□□ -1.31
SQLE-203ENST00000518931 PEX19P40855 299 aa6.89□□□□□ -1.31
SQLE-203ENST00000518931 CCT5P48643 541 aa6.89□□□□□ -1.31
SQLE-203ENST00000518931 CLK1P49759 484 aaKnown RBP6.89□□□□□ -1.31
SQLE-203ENST00000518931 MMP14P50281 582 aa6.89□□□□□ -1.31
SQLE-203ENST00000518931 CLRN1P58418 232 aa6.89□□□□□ -1.31
SQLE-203ENST00000518931 KRTAP10-2P60368 255 aa6.89□□□□□ -1.31
SQLE-203ENST00000518931 GPSM2P81274 684 aa6.89□□□□□ -1.31
SQLE-203ENST00000518931 DCAF17Q5H9S7 520 aaPredicted RBP6.89□□□□□ -1.31
SQLE-203ENST00000518931 METTL24Q5JXM2 366 aa6.89□□□□□ -1.31
SQLE-203ENST00000518931 WDR45BQ5MNZ6 344 aa6.89□□□□□ -1.31
SQLE-203ENST00000518931 EFCAB12Q6NXP0 572 aa6.89□□□□□ -1.31
SQLE-203ENST00000518931 MZT2AQ6P582 158 aa6.89□□□□□ -1.31
SQLE-203ENST00000518931 CFAP161Q6P656 301 aa6.89□□□□□ -1.31
SQLE-203ENST00000518931 TOGARAM2Q6ZUX3 1019 aa6.89□□□□□ -1.31
SQLE-203ENST00000518931 RSPH3Q86UC2 560 aa6.89□□□□□ -1.31
SQLE-203ENST00000518931 TMPRSS6Q8IU80 811 aa6.89□□□□□ -1.31
SQLE-203ENST00000518931 LMNTD2Q8IXW0 634 aa6.89□□□□□ -1.31
SQLE-203ENST00000518931 IL17DQ8TAD2 202 aa6.89□□□□□ -1.31
SQLE-203ENST00000518931 TFAP2CQ92754 450 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms