RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 RBM10P98175 930 aaKnown RBP23.8■■□□□ 1.4
VEGFA-217ENST00000518538 TFAMQ00059 246 aaKnown RBP23.8■■□□□ 1.4
VEGFA-217ENST00000518538 DLX2Q07687 328 aaPredicted RBP23.8■■□□□ 1.4
VEGFA-217ENST00000518538 MYBPC2Q14324 1141 aa23.8■■□□□ 1.4
VEGFA-217ENST00000518538 LEXMQ3ZCV2 418 aa23.8■■□□□ 1.4
VEGFA-217ENST00000518538 SMYD4Q8IYR2 804 aaPredicted RBP23.8■■□□□ 1.4
VEGFA-217ENST00000518538 RDH13Q8NBN7 331 aa23.8■■□□□ 1.4
VEGFA-217ENST00000518538 CACTINQ8WUQ7 758 aaKnown RBP23.8■■□□□ 1.4
VEGFA-217ENST00000518538 SUSD3Q96L08 255 aa23.8■■□□□ 1.4
VEGFA-217ENST00000518538 FNIP2Q9P278 1114 aa23.8■■□□□ 1.4
VEGFA-217ENST00000518538 H3BQ06 376 aaPredicted RBP23.79■■□□□ 1.4
VEGFA-217ENST00000518538 PIRO00625 290 aa23.79■■□□□ 1.4
VEGFA-217ENST00000518538 SYN3O14994 580 aa23.79■■□□□ 1.4
VEGFA-217ENST00000518538 TEX28O15482 410 aa23.79■■□□□ 1.4
VEGFA-217ENST00000518538 NR3C1P04150 777 aa23.79■■□□□ 1.4
VEGFA-217ENST00000518538 PAX3P23760 479 aa23.79■■□□□ 1.4
VEGFA-217ENST00000518538 KLRC2P26717 231 aa23.79■■□□□ 1.4
VEGFA-217ENST00000518538 TKTP29401 623 aaKnown RBP23.79■■□□□ 1.4
VEGFA-217ENST00000518538 AARSP49588 968 aaKnown RBP eCLIP23.79■■□□□ 1.41e-6■■■■□ 20.6
VEGFA-217ENST00000518538 CYP24A1Q07973 514 aa23.79■■□□□ 1.4
VEGFA-217ENST00000518538 NFIL3Q16649 462 aa23.79■■□□□ 1.4
VEGFA-217ENST00000518538 LLGL2Q6P1M3 1020 aa23.79■■□□□ 1.4
VEGFA-217ENST00000518538 PRSS55Q6UWB4 352 aaPredicted RBP23.79■■□□□ 1.4
VEGFA-217ENST00000518538 LNX1Q8TBB1 728 aaPredicted RBP23.79■■□□□ 1.4
VEGFA-217ENST00000518538 SLC22A17Q8WUG5 538 aa23.79■■□□□ 1.4
VEGFA-217ENST00000518538 CASP10Q92851 521 aa23.79■■□□□ 1.4
VEGFA-217ENST00000518538 ASB2Q96Q27 587 aa23.79■■□□□ 1.4
VEGFA-217ENST00000518538 CLEC1BQ9P126 229 aa23.79■■□□□ 1.4
VEGFA-217ENST00000518538 MAN1B1Q9UKM7 699 aa23.79■■□□□ 1.4
VEGFA-217ENST00000518538 BARX2Q9UMQ3 279 aaPredicted RBP23.79■■□□□ 1.4
VEGFA-217ENST00000518538 PPEF2O14830 753 aa23.78■■□□□ 1.4
VEGFA-217ENST00000518538 PRCPP42785 496 aa23.78■■□□□ 1.4
VEGFA-217ENST00000518538 CLCN4P51793 760 aa23.78■■□□□ 1.4
VEGFA-217ENST00000518538 PSMD6Q15008 389 aa23.78■■□□□ 1.4
VEGFA-217ENST00000518538 PSMD5Q16401 504 aa23.78■■□□□ 1.4
VEGFA-217ENST00000518538 MSLNLQ96KJ4 702 aa23.78■■□□□ 1.4
VEGFA-217ENST00000518538 LMBRD1Q9NUN5 540 aa23.78■■□□□ 1.4
VEGFA-217ENST00000518538 TMEM191BP0C7N4 346 aa23.77■■□□□ 1.4
VEGFA-217ENST00000518538 ZCWPW2Q504Y3 356 aa23.77■■□□□ 1.4
VEGFA-217ENST00000518538 ANKS3Q6ZW76 656 aa23.77■■□□□ 1.4
VEGFA-217ENST00000518538 WDR49Q8IV35 697 aa23.77■■□□□ 1.4
VEGFA-217ENST00000518538 C1orf127Q8N9H9 656 aa23.77■■□□□ 1.4
VEGFA-217ENST00000518538 MFSD14AQ96MC6 490 aa23.77■■□□□ 1.4
VEGFA-217ENST00000518538 INTS13Q9NVM9 706 aa23.77■■□□□ 1.4
VEGFA-217ENST00000518538 PCDHB8Q9UN66 801 aa23.77■■□□□ 1.4
VEGFA-217ENST00000518538 VWA8A3KMH1 1905 aa23.76■■□□□ 1.39
VEGFA-217ENST00000518538 GOLGA6L22H0YM25 854 aa23.76■■□□□ 1.39
VEGFA-217ENST00000518538 M0QZQ0 153 aa23.76■■□□□ 1.39
VEGFA-217ENST00000518538 LILRA4P59901 499 aa23.76■■□□□ 1.39
VEGFA-217ENST00000518538 ANKRD54Q6NXT1 300 aa23.76■■□□□ 1.39
VEGFA-217ENST00000518538 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.76■■□□□ 1.39
VEGFA-217ENST00000518538 ANKRD36BP1Q96IX9 119 aa23.76■■□□□ 1.39
VEGFA-217ENST00000518538 FNBP1Q96RU3 617 aa23.76■■□□□ 1.39
VEGFA-217ENST00000518538 CGRRF1Q99675 332 aa23.76■■□□□ 1.39
VEGFA-217ENST00000518538 MTMR12Q9C0I1 747 aa23.76■■□□□ 1.39
VEGFA-217ENST00000518538 MTRRQ9UBK8 725 aa23.76■■□□□ 1.39
VEGFA-217ENST00000518538 CD207Q9UJ71 328 aa23.76■■□□□ 1.39
VEGFA-217ENST00000518538 ITGA11Q9UKX5 1188 aa23.76■■□□□ 1.39
VEGFA-217ENST00000518538 PTPRJQ12913 1337 aa23.76■■□□□ 1.39
VEGFA-217ENST00000518538 C1RP00736 705 aa23.75■■□□□ 1.39
VEGFA-217ENST00000518538 DLATP10515 647 aaKnown RBP23.75■■□□□ 1.39
VEGFA-217ENST00000518538 EPCAMP16422 314 aa23.75■■□□□ 1.39
VEGFA-217ENST00000518538 RPL17P18621 184 aaKnown RBP23.75■■□□□ 1.39
VEGFA-217ENST00000518538 NR2F2P24468 414 aa23.75■■□□□ 1.39
VEGFA-217ENST00000518538 RPL13P26373 211 aaKnown RBP23.75■■□□□ 1.39
VEGFA-217ENST00000518538 KCNQ1P51787 676 aa23.75■■□□□ 1.39
VEGFA-217ENST00000518538 CAMK4Q16566 473 aa23.75■■□□□ 1.39
VEGFA-217ENST00000518538 DUOXA2Q1HG44 320 aa23.75■■□□□ 1.39
VEGFA-217ENST00000518538 EDRF1Q3B7T1 1238 aa23.75■■□□□ 1.39
VEGFA-217ENST00000518538 PUS10Q3MIT2 529 aaKnown RBP23.75■■□□□ 1.39
VEGFA-217ENST00000518538 VARS2Q5ST30 1063 aaKnown RBP23.75■■□□□ 1.39
VEGFA-217ENST00000518538 LMBRD2Q68DH5 695 aaPredicted RBP23.75■■□□□ 1.39
VEGFA-217ENST00000518538 ADSSL1Q8N142 457 aa23.75■■□□□ 1.39
VEGFA-217ENST00000518538 APPL2Q8NEU8 664 aa23.75■■□□□ 1.39
VEGFA-217ENST00000518538 CCDC127Q96BQ5 260 aa23.75■■□□□ 1.39
VEGFA-217ENST00000518538 ZNF560Q96MR9 790 aa23.75■■□□□ 1.39
VEGFA-217ENST00000518538 CLSTN3Q9BQT9 956 aa23.75■■□□□ 1.39
VEGFA-217ENST00000518538 DZANK1Q9NVP4 752 aa23.75■■□□□ 1.39
VEGFA-217ENST00000518538 FRMD4BQ9Y2L6 1034 aa23.75■■□□□ 1.39
VEGFA-217ENST00000518538 BACE2Q9Y5Z0 518 aa23.75■■□□□ 1.39
VEGFA-217ENST00000518538 GLUD1P00367 558 aa23.74■■□□□ 1.39
VEGFA-217ENST00000518538 TNNC2P02585 160 aa23.74■■□□□ 1.39
VEGFA-217ENST00000518538 ITGB3P05106 788 aa23.74■■□□□ 1.39
VEGFA-217ENST00000518538 HOXB8P17481 243 aaPredicted RBP23.74■■□□□ 1.39
VEGFA-217ENST00000518538 POLR2BP30876 1174 aaKnown RBP23.74■■□□□ 1.39
VEGFA-217ENST00000518538 PPP1R2P41236 205 aa23.74■■□□□ 1.39
VEGFA-217ENST00000518538 PNPLA4P41247 253 aa23.74■■□□□ 1.39
VEGFA-217ENST00000518538 CASP4P49662 377 aa23.74■■□□□ 1.39
VEGFA-217ENST00000518538 TAF6P49848 677 aa23.74■■□□□ 1.39
VEGFA-217ENST00000518538 MORC3Q14149 939 aa23.74■■□□□ 1.39
VEGFA-217ENST00000518538 MRPL58Q14197 206 aaKnown RBP23.74■■□□□ 1.39
VEGFA-217ENST00000518538 CLUL1Q15846 466 aa23.74■■□□□ 1.39
VEGFA-217ENST00000518538 TJAP1Q5JTD0 557 aa23.74■■□□□ 1.39
VEGFA-217ENST00000518538 CEP135Q66GS9 1140 aa23.74■■□□□ 1.39
VEGFA-217ENST00000518538 ISM2Q6H9L7 571 aa23.74■■□□□ 1.39
VEGFA-217ENST00000518538 CENPPQ6IPU0 288 aa23.74■■□□□ 1.39
VEGFA-217ENST00000518538 DSTYKQ6XUX3 929 aa23.74■■□□□ 1.39
VEGFA-217ENST00000518538 GLYCTKQ8IVS8 523 aa23.74■■□□□ 1.39
VEGFA-217ENST00000518538 CSGALNACT2Q8N6G5 542 aa23.74■■□□□ 1.39
VEGFA-217ENST00000518538 SMRP1Q8NCR6 262 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms