RNA–Protein interactions for RNA: ENST00000518344.1

FAM49B-208, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-208ENST00000518344 SYN3O14994 580 aa20.24■□□□□ 0.83
FAM49B-208ENST00000518344 KLRC4O43908 158 aa20.24■□□□□ 0.83
FAM49B-208ENST00000518344 EXTL3O43909 919 aa20.24■□□□□ 0.83
FAM49B-208ENST00000518344 ZNF202O95125 648 aa20.24■□□□□ 0.83
FAM49B-208ENST00000518344 IL18RAPO95256 599 aa20.24■□□□□ 0.83
FAM49B-208ENST00000518344 OR1D2P34982 312 aa20.24■□□□□ 0.83
FAM49B-208ENST00000518344 MTHFRP42898 656 aa20.24■□□□□ 0.83
FAM49B-208ENST00000518344 KMT5BQ4FZB7 885 aa20.24■□□□□ 0.83
FAM49B-208ENST00000518344 VARS2Q5ST30 1063 aaKnown RBP20.24■□□□□ 0.83
FAM49B-208ENST00000518344 LILRA6Q6PI73 481 aa20.24■□□□□ 0.83
FAM49B-208ENST00000518344 KRBA2Q6ZNG9 492 aa20.24■□□□□ 0.83
FAM49B-208ENST00000518344 GPD1LQ8N335 351 aa20.24■□□□□ 0.83
FAM49B-208ENST00000518344 KREMEN2Q8NCW0 462 aa20.24■□□□□ 0.83
FAM49B-208ENST00000518344 FEZF2Q8TBJ5 459 aa20.24■□□□□ 0.83
FAM49B-208ENST00000518344 SUSD3Q96L08 255 aa20.24■□□□□ 0.83
FAM49B-208ENST00000518344 PLEKHA4Q9H4M7 779 aa20.24■□□□□ 0.83
FAM49B-208ENST00000518344 RBAKQ9NYW8 714 aaPredicted RBP20.24■□□□□ 0.83
FAM49B-208ENST00000518344 C2CD2Q9Y426 696 aa20.24■□□□□ 0.83
FAM49B-208ENST00000518344 CDY1Q9Y6F8 540 aa20.24■□□□□ 0.83
FAM49B-208ENST00000518344 CCDC195A0A1B0GUA6 201 aa20.23■□□□□ 0.83
FAM49B-208ENST00000518344 PPEF2O14830 753 aa20.23■□□□□ 0.83
FAM49B-208ENST00000518344 RFPL2O75678 378 aa20.23■□□□□ 0.83
FAM49B-208ENST00000518344 C1RP00736 705 aa20.23■□□□□ 0.83
FAM49B-208ENST00000518344 MYL1P05976 194 aa20.23■□□□□ 0.83
FAM49B-208ENST00000518344 SP100P23497 879 aaPredicted RBP20.23■□□□□ 0.83
FAM49B-208ENST00000518344 C9orf57Q5W0N0 161 aa20.23■□□□□ 0.83
FAM49B-208ENST00000518344 DSTYKQ6XUX3 929 aa20.23■□□□□ 0.83
FAM49B-208ENST00000518344 BRSK2Q8IWQ3 736 aa20.23■□□□□ 0.83
FAM49B-208ENST00000518344 HDAC7Q8WUI4 952 aa20.23■□□□□ 0.83
FAM49B-208ENST00000518344 NECTIN4Q96NY8 510 aa20.23■□□□□ 0.83
FAM49B-208ENST00000518344 POMKQ9H5K3 350 aa20.23■□□□□ 0.83
FAM49B-208ENST00000518344 TSHZ2Q9NRE2 1034 aa20.23■□□□□ 0.83
FAM49B-208ENST00000518344 DPP3Q9NY33 737 aa20.23■□□□□ 0.83
FAM49B-208ENST00000518344 HSPBP1Q9NZL4 362 aa20.23■□□□□ 0.83
FAM49B-208ENST00000518344 MTRRQ9UBK8 725 aa20.23■□□□□ 0.83
FAM49B-208ENST00000518344 BACE2Q9Y5Z0 518 aa20.23■□□□□ 0.83
FAM49B-208ENST00000518344 UBE4BO95155 1302 aa20.23■□□□□ 0.83
FAM49B-208ENST00000518344 H7C4K7 107 aa20.22■□□□□ 0.83
FAM49B-208ENST00000518344 KIAA0391O15091 583 aaKnown RBP20.22■□□□□ 0.83
FAM49B-208ENST00000518344 CLIC2O15247 247 aa20.22■□□□□ 0.83
FAM49B-208ENST00000518344 TGFB1I1O43294 461 aa20.22■□□□□ 0.83
FAM49B-208ENST00000518344 RPN1P04843 607 aaKnown RBP20.22■□□□□ 0.83
FAM49B-208ENST00000518344 PRR29P0C7W0 189 aa20.22■□□□□ 0.83
FAM49B-208ENST00000518344 ARPP19P56211 112 aa20.22■□□□□ 0.83
FAM49B-208ENST00000518344 TFAMQ00059 246 aaKnown RBP20.22■□□□□ 0.83
FAM49B-208ENST00000518344 STK4Q13043 487 aa20.22■□□□□ 0.83
FAM49B-208ENST00000518344 PSMD2Q13200 908 aa20.22■□□□□ 0.83
FAM49B-208ENST00000518344 RSPO2Q6UXX9 243 aaPredicted RBP20.22■□□□□ 0.83
FAM49B-208ENST00000518344 HS2ST1Q7LGA3 356 aa20.22■□□□□ 0.83
FAM49B-208ENST00000518344 GPR149Q86SP6 731 aa20.22■□□□□ 0.83
FAM49B-208ENST00000518344 EFCAB13Q8IY85 973 aa20.22■□□□□ 0.83
FAM49B-208ENST00000518344 APPL2Q8NEU8 664 aa20.22■□□□□ 0.83
FAM49B-208ENST00000518344 AGPAT3Q9NRZ7 376 aa20.22■□□□□ 0.83
FAM49B-208ENST00000518344 PCDHB8Q9UN66 801 aa20.22■□□□□ 0.83
FAM49B-208ENST00000518344 TIMM13Q9Y5L4 95 aaPredicted RBP20.22■□□□□ 0.83
FAM49B-208ENST00000518344 TRIP11Q15643 1979 aa20.21■□□□□ 0.83
FAM49B-208ENST00000518344 CITO14578 2027 aa20.21■□□□□ 0.83
FAM49B-208ENST00000518344 CYP2J2P51589 502 aa20.21■□□□□ 0.83
FAM49B-208ENST00000518344 WNT7BP56706 349 aa20.21■□□□□ 0.83
FAM49B-208ENST00000518344 RAB33AQ14088 237 aa20.21■□□□□ 0.83
FAM49B-208ENST00000518344 NT5DC4Q86YG4 428 aa20.21■□□□□ 0.83
FAM49B-208ENST00000518344 KHSRPQ92945 711 aaKnown RBP eCLIP20.21■□□□□ 0.83
FAM49B-208ENST00000518344 CCDC47Q96A33 483 aaKnown RBP20.21■□□□□ 0.83
FAM49B-208ENST00000518344 CIZ1Q9ULV3 898 aaPredicted RBP20.21■□□□□ 0.83
FAM49B-208ENST00000518344 ZNF233A6NK53 670 aa20.2■□□□□ 0.82
FAM49B-208ENST00000518344 LOC730098B7Z3J9 87 aa20.2■□□□□ 0.82
FAM49B-208ENST00000518344 PIRO00625 290 aa20.2■□□□□ 0.82
FAM49B-208ENST00000518344 ANP32AP39687 249 aaKnown RBP20.2■□□□□ 0.82
FAM49B-208ENST00000518344 LILRA4P59901 499 aa20.2■□□□□ 0.82
FAM49B-208ENST00000518344 KNOP1Q1ED39 458 aaKnown RBP20.2■□□□□ 0.82
FAM49B-208ENST00000518344 BMT2Q1RMZ1 405 aa20.2■□□□□ 0.82
FAM49B-208ENST00000518344 CTXN3Q4LDR2 81 aa20.2■□□□□ 0.82
FAM49B-208ENST00000518344 LIN9Q5TKA1 542 aa20.2■□□□□ 0.82
FAM49B-208ENST00000518344 C15orf39Q6ZRI6 1047 aa20.2■□□□□ 0.82
FAM49B-208ENST00000518344 USP37Q86T82 979 aa20.2■□□□□ 0.82
FAM49B-208ENST00000518344 CBWD2Q8IUF1 395 aa20.2■□□□□ 0.82
FAM49B-208ENST00000518344 RDH13Q8NBN7 331 aa20.2■□□□□ 0.82
FAM49B-208ENST00000518344 CMASQ8NFW8 434 aaPredicted RBP20.2■□□□□ 0.82
FAM49B-208ENST00000518344 CACTINQ8WUQ7 758 aaKnown RBP20.2■□□□□ 0.82
FAM49B-208ENST00000518344 CCDC34Q96HJ3 373 aa20.2■□□□□ 0.82
FAM49B-208ENST00000518344 PIDD1Q9HB75 910 aa20.2■□□□□ 0.82
FAM49B-208ENST00000518344 PDE11AQ9HCR9 933 aa20.2■□□□□ 0.82
FAM49B-208ENST00000518344 FBXW11Q9UKB1 542 aa20.2■□□□□ 0.82
FAM49B-208ENST00000518344 NR2E1Q9Y466 385 aa20.2■□□□□ 0.82
FAM49B-208ENST00000518344 ANO9A1A5B4 782 aa20.19■□□□□ 0.82
FAM49B-208ENST00000518344 M0QZQ0 153 aa20.19■□□□□ 0.82
FAM49B-208ENST00000518344 SPTLC1O15269 473 aa20.19■□□□□ 0.82
FAM49B-208ENST00000518344 C8AP07357 584 aa20.19■□□□□ 0.82
FAM49B-208ENST00000518344 AARSP49588 968 aaKnown RBP eCLIP20.19■□□□□ 0.82
FAM49B-208ENST00000518344 SNRPFP62306 86 aaKnown RBP20.19■□□□□ 0.82
FAM49B-208ENST00000518344 YWHAHQ04917 246 aaPredicted RBP20.19■□□□□ 0.82
FAM49B-208ENST00000518344 DPYDQ12882 1025 aa20.19■□□□□ 0.82
FAM49B-208ENST00000518344 MRPL58Q14197 206 aaKnown RBP20.19■□□□□ 0.82
FAM49B-208ENST00000518344 ZNF280DQ6N043 979 aa20.19■□□□□ 0.82
FAM49B-208ENST00000518344 RNF135Q8IUD6 432 aa20.19■□□□□ 0.82
FAM49B-208ENST00000518344 KIAA0895Q8NCT3 520 aa20.19■□□□□ 0.82
FAM49B-208ENST00000518344 SMG7Q92540 1137 aaKnown RBP20.19■□□□□ 0.82
FAM49B-208ENST00000518344 SENP8Q96LD8 212 aa20.19■□□□□ 0.82
FAM49B-208ENST00000518344 EPHX3Q9H6B9 360 aa20.19■□□□□ 0.82
FAM49B-208ENST00000518344 KIAA1586Q9HCI6 787 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms