RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 KISS1RQ969F8 398 aaPredicted RBP3.99□□□□□ -1.77
CPNE3-204ENST00000517862 TEKT1Q969V4 418 aa3.99□□□□□ -1.77
CPNE3-204ENST00000517862 LOXL4Q96JB6 756 aa3.99□□□□□ -1.77
CPNE3-204ENST00000517862 CEP89Q96ST8 783 aa3.99□□□□□ -1.77
CPNE3-204ENST00000517862 KIF2CQ99661 725 aa3.99□□□□□ -1.77
CPNE3-204ENST00000517862 WDR18Q9BV38 432 aa3.99□□□□□ -1.77
CPNE3-204ENST00000517862 UPF3AQ9H1J1 476 aaKnown RBP3.99□□□□□ -1.77
CPNE3-204ENST00000517862 FBRSQ9HAH7 460 aa3.99□□□□□ -1.77
CPNE3-204ENST00000517862 KRT82Q9NSB4 513 aa3.99□□□□□ -1.77
CPNE3-204ENST00000517862 TYW1Q9NV66 732 aaKnown RBP3.99□□□□□ -1.77
CPNE3-204ENST00000517862 TJP2Q9UDY2 1190 aa3.99□□□□□ -1.77
CPNE3-204ENST00000517862 ITGB1BP2Q9UKP3 347 aa3.99□□□□□ -1.77
CPNE3-204ENST00000517862 DENND2AQ9ULE3 1009 aa3.99□□□□□ -1.77
CPNE3-204ENST00000517862 ATAD5Q96QE3 1844 aa3.99□□□□□ -1.77
CPNE3-204ENST00000517862 CSMD2Q7Z408 3487 aa3.99□□□□□ -1.77
CPNE3-204ENST00000517862 MYO16Q9Y6X6 1858 aa3.98□□□□□ -1.77
CPNE3-204ENST00000517862 MROH7-TTC4A0A0A0MT08 1334 aa3.98□□□□□ -1.77
CPNE3-204ENST00000517862 LOC100289279A0A1B0GTE1 492 aa3.98□□□□□ -1.77
CPNE3-204ENST00000517862 LNP1A1A4G5 178 aa3.98□□□□□ -1.77
CPNE3-204ENST00000517862 ZNF503-AS2A6NEH8 195 aa3.98□□□□□ -1.77
CPNE3-204ENST00000517862 GSG1L2A8MUP6 293 aa3.98□□□□□ -1.77
CPNE3-204ENST00000517862 GAS2O43903 313 aaKnown RBP3.98□□□□□ -1.77
CPNE3-204ENST00000517862 NUAK1O60285 661 aa3.98□□□□□ -1.77
CPNE3-204ENST00000517862 KATNA1O75449 491 aa3.98□□□□□ -1.77
CPNE3-204ENST00000517862 UBOX5O94941 541 aa3.98□□□□□ -1.77
CPNE3-204ENST00000517862 IL1R1P14778 569 aa3.98□□□□□ -1.77
CPNE3-204ENST00000517862 MAP4P27816 1152 aaKnown RBP3.98□□□□□ -1.77
CPNE3-204ENST00000517862 FNTBP49356 437 aa3.98□□□□□ -1.77
CPNE3-204ENST00000517862 PPP2R2AP63151 447 aa3.98□□□□□ -1.77
CPNE3-204ENST00000517862 CHAF1AQ13111 956 aaPredicted RBP3.98□□□□□ -1.77
CPNE3-204ENST00000517862 GPNMBQ14956 572 aa3.98□□□□□ -1.77
CPNE3-204ENST00000517862 PTPN14Q15678 1187 aa3.98□□□□□ -1.77
CPNE3-204ENST00000517862 NKG7Q16617 165 aa3.98□□□□□ -1.77
CPNE3-204ENST00000517862 DUSP6Q16828 381 aa3.98□□□□□ -1.77
CPNE3-204ENST00000517862 DCAF6Q58WW2 860 aa3.98□□□□□ -1.77
CPNE3-204ENST00000517862 C1QL3Q5VWW1 255 aa3.98□□□□□ -1.77
CPNE3-204ENST00000517862 ANKRD34AQ69YU3 496 aa3.98□□□□□ -1.77
CPNE3-204ENST00000517862 FDX2Q6P4F2 183 aa3.98□□□□□ -1.77
CPNE3-204ENST00000517862 LHFPL2Q6ZUX7 228 aa3.98□□□□□ -1.77
CPNE3-204ENST00000517862 OTOP3Q7RTS5 596 aa3.98□□□□□ -1.77
CPNE3-204ENST00000517862 ZNF227Q86WZ6 799 aa3.98□□□□□ -1.77
CPNE3-204ENST00000517862 CMASQ8NFW8 434 aaPredicted RBP3.98□□□□□ -1.77
CPNE3-204ENST00000517862 BAHD1Q8TBE0 780 aaPredicted RBP3.98□□□□□ -1.77
CPNE3-204ENST00000517862 XAGE3Q8WTP9 111 aa3.98□□□□□ -1.77
CPNE3-204ENST00000517862 ADAMTS14Q8WXS8 1223 aa3.98□□□□□ -1.77
CPNE3-204ENST00000517862 MYADMQ96S97 322 aa3.98□□□□□ -1.77
CPNE3-204ENST00000517862 CDCA3Q99618 268 aaPredicted RBP3.98□□□□□ -1.77
CPNE3-204ENST00000517862 SMAD5Q99717 465 aaKnown RBP3.98□□□□□ -1.77
CPNE3-204ENST00000517862 AARSD1Q9BTE6 412 aaKnown RBP3.98□□□□□ -1.77
CPNE3-204ENST00000517862 DHRS4Q9BTZ2 278 aa3.98□□□□□ -1.77
CPNE3-204ENST00000517862 OSBPL6Q9BZF3 934 aa3.98□□□□□ -1.77
CPNE3-204ENST00000517862 WNT10AQ9GZT5 417 aa3.98□□□□□ -1.77
CPNE3-204ENST00000517862 CAAP1Q9H8G2 361 aa3.98□□□□□ -1.77
CPNE3-204ENST00000517862 LRP2BPQ9P2M1 347 aa3.98□□□□□ -1.77
CPNE3-204ENST00000517862 SUSD2Q9UGT4 822 aa3.98□□□□□ -1.77
CPNE3-204ENST00000517862 ZHX1Q9UKY1 873 aaPredicted RBP3.98□□□□□ -1.77
CPNE3-204ENST00000517862 AKAP9Q99996 3911 aa3.98□□□□□ -1.77
CPNE3-204ENST00000517862 SDK2Q58EX2 2172 aa3.97□□□□□ -1.77
CPNE3-204ENST00000517862 TRBV23-1A0A0A0MS06 115 aa3.97□□□□□ -1.77
CPNE3-204ENST00000517862 TRAV20A0A0B4J274 112 aa3.97□□□□□ -1.77
CPNE3-204ENST00000517862 A1L4Q6 167 aa3.97□□□□□ -1.77
CPNE3-204ENST00000517862 VPS37CA5D8V6 355 aaPredicted RBP3.97□□□□□ -1.77
CPNE3-204ENST00000517862 AGRPO00253 132 aa3.97□□□□□ -1.77
CPNE3-204ENST00000517862 CTAGE5O15320 804 aa3.97□□□□□ -1.77
CPNE3-204ENST00000517862 PRODHO43272 600 aa3.97□□□□□ -1.77
CPNE3-204ENST00000517862 ADCY6O43306 1168 aa3.97□□□□□ -1.77
CPNE3-204ENST00000517862 CBFA2T2O43439 604 aa3.97□□□□□ -1.77
CPNE3-204ENST00000517862 KRT1P04264 644 aa3.97□□□□□ -1.77
CPNE3-204ENST00000517862 ITGB1P05556 798 aa3.97□□□□□ -1.77
CPNE3-204ENST00000517862 ITGAVP06756 1048 aa3.97□□□□□ -1.77
CPNE3-204ENST00000517862 TMEM253P0C7T8 217 aa3.97□□□□□ -1.77
CPNE3-204ENST00000517862 FUT4P22083 530 aa3.97□□□□□ -1.77
CPNE3-204ENST00000517862 SOX5P35711 763 aa3.97□□□□□ -1.77
CPNE3-204ENST00000517862 BACE1P56817 501 aa3.97□□□□□ -1.77
CPNE3-204ENST00000517862 TBX4P57082 545 aa3.97□□□□□ -1.77
CPNE3-204ENST00000517862 EXOSC10Q01780 885 aaKnown RBP3.97□□□□□ -1.77
CPNE3-204ENST00000517862 ZC3H12AQ5D1E8 599 aaKnown RBP3.97□□□□□ -1.77
CPNE3-204ENST00000517862 FAM47CQ5HY64 1035 aa3.97□□□□□ -1.77
CPNE3-204ENST00000517862 ATAT1Q5SQI0 421 aa3.97□□□□□ -1.77
CPNE3-204ENST00000517862 ZBTB41Q5SVQ8 909 aa3.97□□□□□ -1.77
CPNE3-204ENST00000517862 ZBTB37Q5TC79 503 aa3.97□□□□□ -1.77
CPNE3-204ENST00000517862 ZNF804AQ7Z570 1209 aa3.97□□□□□ -1.77
CPNE3-204ENST00000517862 LRRTM3Q86VH5 581 aa3.97□□□□□ -1.77
CPNE3-204ENST00000517862 SLC44A3Q8N4M1 653 aa3.97□□□□□ -1.77
CPNE3-204ENST00000517862 PNPLA1Q8N8W4 532 aa3.97□□□□□ -1.77
CPNE3-204ENST00000517862 LRRN4CLQ8ND94 238 aa3.97□□□□□ -1.77
CPNE3-204ENST00000517862 ADCY4Q8NFM4 1077 aa3.97□□□□□ -1.77
CPNE3-204ENST00000517862 ATL2Q8NHH9 583 aa3.97□□□□□ -1.77
CPNE3-204ENST00000517862 SPPL3Q8TCT6 385 aa3.97□□□□□ -1.77
CPNE3-204ENST00000517862 POF1BQ8WVV4 589 aa3.97□□□□□ -1.77
CPNE3-204ENST00000517862 WNT8BQ93098 351 aa3.97□□□□□ -1.77
CPNE3-204ENST00000517862 IL17RAQ96F46 866 aa3.97□□□□□ -1.77
CPNE3-204ENST00000517862 TMEM87BQ96K49 555 aa3.97□□□□□ -1.77
CPNE3-204ENST00000517862 ZDHHC15Q96MV8 337 aa3.97□□□□□ -1.77
CPNE3-204ENST00000517862 MENTQ9BUN1 341 aa3.97□□□□□ -1.77
CPNE3-204ENST00000517862 RUSC1Q9BVN2 902 aa3.97□□□□□ -1.77
CPNE3-204ENST00000517862 CSRNP2Q9H175 543 aa3.97□□□□□ -1.77
CPNE3-204ENST00000517862 EPN3Q9H201 632 aa3.97□□□□□ -1.77
CPNE3-204ENST00000517862 TMX1Q9H3N1 280 aa3.97□□□□□ -1.77
CPNE3-204ENST00000517862 AS3MTQ9HBK9 375 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms