RNA–Protein interactions for RNA: ENST00000517838.5

PVT1-206, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 518 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-206ENST00000517838 LRRC27Q9C0I9 530 aa8.11□□□□□ -1.11
PVT1-206ENST00000517838 GBP3Q9H0R5 595 aa8.11□□□□□ -1.11
PVT1-206ENST00000517838 MAN1C1Q9NR34 630 aa8.11□□□□□ -1.11
PVT1-206ENST00000517838 ARHGEF3Q9NR81 526 aa8.11□□□□□ -1.11
PVT1-206ENST00000517838 TBC1D22BQ9NU19 505 aa8.11□□□□□ -1.11
PVT1-206ENST00000517838 INPP5FQ9Y2H2 1132 aa8.11□□□□□ -1.11
PVT1-206ENST00000517838 PCDHA10Q9Y5I2 948 aa8.11□□□□□ -1.11
PVT1-206ENST00000517838 CFAP47Q6ZTR5 3102 aa8.11□□□□□ -1.11
PVT1-206ENST00000517838 MYO10Q9HD67 2058 aa8.1□□□□□ -1.11
PVT1-206ENST00000517838 CLUHO75153 1309 aa8.1□□□□□ -1.11
PVT1-206ENST00000517838 CARNS1A5YM72 827 aa8.1□□□□□ -1.11
PVT1-206ENST00000517838 ANHXE9PGG2 379 aa8.1□□□□□ -1.11
PVT1-206ENST00000517838 NRG2O14511 850 aaPredicted RBP8.1□□□□□ -1.11
PVT1-206ENST00000517838 TEX28O15482 410 aa8.1□□□□□ -1.11
PVT1-206ENST00000517838 ZBTB24O43167 697 aaPredicted RBP8.1□□□□□ -1.11
PVT1-206ENST00000517838 SLC37A4O43826 429 aa8.1□□□□□ -1.11
PVT1-206ENST00000517838 ZNF623O75123 536 aa8.1□□□□□ -1.11
PVT1-206ENST00000517838 PSAPP07602 524 aa8.1□□□□□ -1.11
PVT1-206ENST00000517838 LAMP2P13473 410 aa8.1□□□□□ -1.11
PVT1-206ENST00000517838 TNNT1P13805 278 aa8.1□□□□□ -1.11
PVT1-206ENST00000517838 RNASELQ05823 741 aaKnown RBP8.1□□□□□ -1.11
PVT1-206ENST00000517838 AP3B2Q13367 1082 aa8.1□□□□□ -1.11
PVT1-206ENST00000517838 DCLRE1AQ6PJP8 1040 aa8.1□□□□□ -1.11
PVT1-206ENST00000517838 LYPD8Q6UX82 237 aa8.1□□□□□ -1.11
PVT1-206ENST00000517838 CYP26C1Q6V0L0 522 aa8.1□□□□□ -1.11
PVT1-206ENST00000517838 SV2BQ7L1I2 683 aa8.1□□□□□ -1.11
PVT1-206ENST00000517838 SMAP1Q8IYB5 467 aaPredicted RBP8.1□□□□□ -1.11
PVT1-206ENST00000517838 ST13P5Q8NFI4 369 aaPredicted RBP8.1□□□□□ -1.11
PVT1-206ENST00000517838 PJA1Q8NG27 643 aa8.1□□□□□ -1.11
PVT1-206ENST00000517838 NXPE3Q969Y0 559 aa8.1□□□□□ -1.11
PVT1-206ENST00000517838 FAM167AQ96KS9 214 aa8.1□□□□□ -1.11
PVT1-206ENST00000517838 PRIMPOLQ96LW4 560 aa8.1□□□□□ -1.11
PVT1-206ENST00000517838 SCLT1Q96NL6 688 aa8.1□□□□□ -1.11
PVT1-206ENST00000517838 ZNF577Q9BSK1 485 aa8.1□□□□□ -1.11
PVT1-206ENST00000517838 RPP25Q9BUL9 199 aaKnown RBP8.1□□□□□ -1.11
PVT1-206ENST00000517838 MRPL17Q9NRX2 175 aaKnown RBP8.1□□□□□ -1.11
PVT1-206ENST00000517838 SAMSN1Q9NSI8 373 aaKnown RBP8.1□□□□□ -1.11
PVT1-206ENST00000517838 NRBP2Q9NSY0 501 aa8.1□□□□□ -1.11
PVT1-206ENST00000517838 EVA1BQ9NVM1 165 aa8.1□□□□□ -1.11
PVT1-206ENST00000517838 TRMT1Q9NXH9 659 aaKnown RBP8.1□□□□□ -1.11
PVT1-206ENST00000517838 STK17AQ9UEE5 414 aa8.1□□□□□ -1.11
PVT1-206ENST00000517838 RWDD2AQ9UIY3 292 aa8.1□□□□□ -1.11
PVT1-206ENST00000517838 MAPK8IP1Q9UQF2 711 aa8.1□□□□□ -1.11
PVT1-206ENST00000517838 GDAQ9Y2T3 454 aa8.1□□□□□ -1.11
PVT1-206ENST00000517838 CHD6Q8TD26 2715 aa8.1□□□□□ -1.11
PVT1-206ENST00000517838 A0A087WZ62 844 aa8.09□□□□□ -1.11
PVT1-206ENST00000517838 BICDL2A1A5D9 508 aa8.09□□□□□ -1.11
PVT1-206ENST00000517838 DCDC2BA2VCK2 349 aa8.09□□□□□ -1.11
PVT1-206ENST00000517838 C2CD2LO14523 706 aa8.09□□□□□ -1.11
PVT1-206ENST00000517838 NRP1O14786 923 aa8.09□□□□□ -1.11
PVT1-206ENST00000517838 INPPL1O15357 1258 aa8.09□□□□□ -1.11
PVT1-206ENST00000517838 PAPLNO95428 1278 aa8.09□□□□□ -1.11
PVT1-206ENST00000517838 EFEMP2O95967 443 aa8.09□□□□□ -1.11
PVT1-206ENST00000517838 SOD2P04179 222 aa8.09□□□□□ -1.11
PVT1-206ENST00000517838 ALDH2P05091 517 aa8.09□□□□□ -1.11
PVT1-206ENST00000517838 KRT18P05783 430 aaKnown RBP8.09□□□□□ -1.11
PVT1-206ENST00000517838 SPATA31D3P0C874 917 aa8.09□□□□□ -1.11
PVT1-206ENST00000517838 IDEP14735 1019 aa8.09□□□□□ -1.11
PVT1-206ENST00000517838 TGM1P22735 817 aa8.09□□□□□ -1.11
PVT1-206ENST00000517838 CCT6AP40227 531 aaKnown RBP8.09□□□□□ -1.11
PVT1-206ENST00000517838 PPP1R2P41236 205 aa8.09□□□□□ -1.11
PVT1-206ENST00000517838 TERF1P54274 439 aa8.09□□□□□ -1.11
PVT1-206ENST00000517838 STARD6P59095 220 aa8.09□□□□□ -1.11
PVT1-206ENST00000517838 CCZ1BP86790 482 aa8.09□□□□□ -1.11
PVT1-206ENST00000517838 CCZ1P86791 482 aaPredicted RBP8.09□□□□□ -1.11
PVT1-206ENST00000517838 HTR4Q13639 388 aa8.09□□□□□ -1.11
PVT1-206ENST00000517838 KCNB1Q14721 858 aa8.09□□□□□ -1.11
PVT1-206ENST00000517838 TARBP2Q15633 366 aaKnown RBP8.09□□□□□ -1.11
PVT1-206ENST00000517838 UGCGQ16739 394 aa8.09□□□□□ -1.11
PVT1-206ENST00000517838 ZNF528Q3MIS6 628 aa8.09□□□□□ -1.11
PVT1-206ENST00000517838 KIAA0319Q5VV43 1072 aa8.09□□□□□ -1.11
PVT1-206ENST00000517838 CEP135Q66GS9 1140 aa8.09□□□□□ -1.11
PVT1-206ENST00000517838 SPECC1LQ69YQ0 1117 aa8.09□□□□□ -1.11
PVT1-206ENST00000517838 TWF2Q6IBS0 349 aaKnown RBP8.09□□□□□ -1.11
PVT1-206ENST00000517838 CNNM4Q6P4Q7 775 aa8.09□□□□□ -1.11
PVT1-206ENST00000517838 AGMOQ6ZNB7 445 aa8.09□□□□□ -1.11
PVT1-206ENST00000517838 SPATA31D4Q6ZUB0 917 aa8.09□□□□□ -1.11
PVT1-206ENST00000517838 FAM114A1Q8IWE2 563 aa8.09□□□□□ -1.11
PVT1-206ENST00000517838 ERMNQ8TAM6 284 aa8.09□□□□□ -1.11
PVT1-206ENST00000517838 SPATA20Q8TB22 786 aa8.09□□□□□ -1.11
PVT1-206ENST00000517838 NOC3LQ8WTT2 800 aaKnown RBP8.09□□□□□ -1.11
PVT1-206ENST00000517838 SMG7Q92540 1137 aaKnown RBP8.09□□□□□ -1.11
PVT1-206ENST00000517838 RPS6KC1Q96S38 1066 aa8.09□□□□□ -1.11
PVT1-206ENST00000517838 CEP89Q96ST8 783 aa8.09□□□□□ -1.11
PVT1-206ENST00000517838 FDXACB1Q9BRP7 624 aaPredicted RBP8.09□□□□□ -1.11
PVT1-206ENST00000517838 GCOM2Q9BZD3 368 aaPredicted RBP8.09□□□□□ -1.11
PVT1-206ENST00000517838 NT5C3AQ9H0P0 336 aa8.09□□□□□ -1.11
PVT1-206ENST00000517838 RXFP1Q9HBX9 757 aa8.09□□□□□ -1.11
PVT1-206ENST00000517838 SLC2A4RGQ9NR83 387 aa8.09□□□□□ -1.11
PVT1-206ENST00000517838 FAM105AQ9NUU6 356 aa8.09□□□□□ -1.11
PVT1-206ENST00000517838 TAB2Q9NYJ8 693 aa8.09□□□□□ -1.11
PVT1-206ENST00000517838 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.09□□□□□ -1.112e-8■■□□□ 12.1
PVT1-206ENST00000517838 STK39Q9UEW8 545 aa8.09□□□□□ -1.11
PVT1-206ENST00000517838 PIN4Q9Y237 131 aaKnown RBP8.09□□□□□ -1.11
PVT1-206ENST00000517838 FAN1Q9Y2M0 1017 aa8.09□□□□□ -1.11
PVT1-206ENST00000517838 MTF2Q9Y483 593 aaPredicted RBP8.09□□□□□ -1.11
PVT1-206ENST00000517838 NUMBLQ9Y6R0 609 aa8.09□□□□□ -1.11
PVT1-206ENST00000517838 KAT6AQ92794 2004 aa8.08□□□□□ -1.12
PVT1-206ENST00000517838 IGKV6-21A0A0C4DH24 114 aa8.08□□□□□ -1.12
PVT1-206ENST00000517838 TMEM150BA6NC51 233 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms