RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 RBM4Q9BWF3 364 aaKnown RBP-0.48□□□□□ -2.49
SNORA40.16-201ENST00000517238 SF3B5Q9BWJ5 86 aaKnown RBP-0.48□□□□□ -2.49
SNORA40.16-201ENST00000517238 CDK19Q9BWU1 502 aa-0.48□□□□□ -2.49
SNORA40.16-201ENST00000517238 SEZ6LQ9BYH1 1024 aa-0.48□□□□□ -2.49
SNORA40.16-201ENST00000517238 ZNF696Q9H7X3 374 aa-0.48□□□□□ -2.49
SNORA40.16-201ENST00000517238 CNNM2Q9H8M5 875 aa-0.48□□□□□ -2.49
SNORA40.16-201ENST00000517238 FAM86C1Q9NVL1 165 aa-0.48□□□□□ -2.49
SNORA40.16-201ENST00000517238 PPARGC1AQ9UBK2 798 aaKnown RBP-0.48□□□□□ -2.49
SNORA40.16-201ENST00000517238 TELO2Q9Y4R8 837 aa-0.48□□□□□ -2.49
SNORA40.16-201ENST00000517238 RNF215Q9Y6U7 377 aa-0.48□□□□□ -2.49
SNORA40.16-201ENST00000517238 USP24Q9UPU5 2620 aa-0.49□□□□□ -2.49
SNORA40.16-201ENST00000517238 FAM86C2PA6NEL3 165 aa-0.49□□□□□ -2.49
SNORA40.16-201ENST00000517238 KIF1CO43896 1103 aaKnown RBP-0.49□□□□□ -2.49
SNORA40.16-201ENST00000517238 TLR2O60603 784 aa-0.49□□□□□ -2.49
SNORA40.16-201ENST00000517238 NPR3P17342 541 aa-0.49□□□□□ -2.49
SNORA40.16-201ENST00000517238 MC4RP32245 332 aa-0.49□□□□□ -2.49
SNORA40.16-201ENST00000517238 ID2Q02363 134 aa-0.49□□□□□ -2.49
SNORA40.16-201ENST00000517238 PPATQ06203 517 aa-0.49□□□□□ -2.49
SNORA40.16-201ENST00000517238 TBX2Q13207 712 aaPredicted RBP-0.49□□□□□ -2.49
SNORA40.16-201ENST00000517238 SHBQ15464 509 aa-0.49□□□□□ -2.49
SNORA40.16-201ENST00000517238 SHHQ15465 462 aa-0.49□□□□□ -2.49
SNORA40.16-201ENST00000517238 CYP2A13Q16696 494 aa-0.49□□□□□ -2.49
SNORA40.16-201ENST00000517238 SLC4A8Q2Y0W8 1093 aa-0.49□□□□□ -2.49
SNORA40.16-201ENST00000517238 ANKRD39Q53RE8 183 aa-0.49□□□□□ -2.49
SNORA40.16-201ENST00000517238 INO80DQ53TQ3 878 aaPredicted RBP-0.49□□□□□ -2.49
SNORA40.16-201ENST00000517238 AXDND1Q5T1B0 1012 aaPredicted RBP-0.49□□□□□ -2.49
SNORA40.16-201ENST00000517238 AGAP9Q5VTM2 703 aa-0.49□□□□□ -2.49
SNORA40.16-201ENST00000517238 ASPHD2Q6ICH7 369 aa-0.49□□□□□ -2.49
SNORA40.16-201ENST00000517238 IQCEQ6IPM2 695 aa-0.49□□□□□ -2.49
SNORA40.16-201ENST00000517238 EFCAB12Q6NXP0 572 aa-0.49□□□□□ -2.49
SNORA40.16-201ENST00000517238 LRSAM1Q6UWE0 723 aa-0.49□□□□□ -2.49
SNORA40.16-201ENST00000517238 C16orf82Q7Z2V1 217 aa-0.49□□□□□ -2.49
SNORA40.16-201ENST00000517238 ARMC9Q7Z3E5 817 aa-0.49□□□□□ -2.49
SNORA40.16-201ENST00000517238 CDC20BQ86Y33 519 aa-0.49□□□□□ -2.49
SNORA40.16-201ENST00000517238 RNF169Q8NCN4 708 aa-0.49□□□□□ -2.49
SNORA40.16-201ENST00000517238 ZNF248Q8NDW4 579 aa-0.49□□□□□ -2.49
SNORA40.16-201ENST00000517238 OR5M3Q8NGP4 307 aa-0.49□□□□□ -2.49
SNORA40.16-201ENST00000517238 DPF2Q92785 391 aa-0.49□□□□□ -2.49
SNORA40.16-201ENST00000517238 PHACTR3Q96KR7 559 aa-0.49□□□□□ -2.49
SNORA40.16-201ENST00000517238 SIGLEC11Q96RL6 698 aa-0.49□□□□□ -2.49
SNORA40.16-201ENST00000517238 C1QTNF4Q9BXJ3 329 aa-0.49□□□□□ -2.49
SNORA40.16-201ENST00000517238 NIF3L1Q9GZT8 377 aa-0.49□□□□□ -2.49
SNORA40.16-201ENST00000517238 RBM38Q9H0Z9 239 aaKnown RBP-0.49□□□□□ -2.49
SNORA40.16-201ENST00000517238 SLC24A3Q9HC58 644 aa-0.49□□□□□ -2.49
SNORA40.16-201ENST00000517238 TMEM8AQ9HCN3 771 aa-0.49□□□□□ -2.49
SNORA40.16-201ENST00000517238 ZNF581Q9P0T4 197 aa-0.49□□□□□ -2.49
SNORA40.16-201ENST00000517238 SAE1Q9UBE0 346 aaPredicted RBP-0.49□□□□□ -2.49
SNORA40.16-201ENST00000517238 BRPF3Q9ULD4 1205 aa-0.49□□□□□ -2.49
SNORA40.16-201ENST00000517238 ZNRF3Q9ULT6 936 aa-0.49□□□□□ -2.49
SNORA40.16-201ENST00000517238 A0A087WZG4 1122 aa-0.5□□□□□ -2.49
SNORA40.16-201ENST00000517238 LOC102724159A0A0B4J2E5 919 aa-0.5□□□□□ -2.49
SNORA40.16-201ENST00000517238 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP-0.5□□□□□ -2.49
SNORA40.16-201ENST00000517238 NRP1O14786 923 aa-0.5□□□□□ -2.49
SNORA40.16-201ENST00000517238 PPP1R3DO95685 299 aa-0.5□□□□□ -2.49
SNORA40.16-201ENST00000517238 TP53P04637 393 aaPredicted RBP-0.5□□□□□ -2.49
SNORA40.16-201ENST00000517238 PCSK6P29122 969 aa-0.5□□□□□ -2.49
SNORA40.16-201ENST00000517238 RBMXP38159 391 aaKnown RBP-0.5□□□□□ -2.49
SNORA40.16-201ENST00000517238 KIR2DL3P43628 341 aa-0.5□□□□□ -2.49
SNORA40.16-201ENST00000517238 CRKP46108 304 aa-0.5□□□□□ -2.49
SNORA40.16-201ENST00000517238 WNT3AP56704 352 aa-0.5□□□□□ -2.49
SNORA40.16-201ENST00000517238 LSAMPQ13449 338 aa-0.5□□□□□ -2.49
SNORA40.16-201ENST00000517238 TCEAL1Q15170 157 aa-0.5□□□□□ -2.49
SNORA40.16-201ENST00000517238 PTPRRQ15256 657 aa-0.5□□□□□ -2.49
SNORA40.16-201ENST00000517238 PWP2Q15269 919 aaKnown RBP-0.5□□□□□ -2.49
SNORA40.16-201ENST00000517238 CCDC85BQ15834 202 aaPredicted RBP-0.5□□□□□ -2.49
SNORA40.16-201ENST00000517238 CNGA3Q16281 694 aa-0.5□□□□□ -2.49
SNORA40.16-201ENST00000517238 MANEAQ5SRI9 462 aa-0.5□□□□□ -2.49
SNORA40.16-201ENST00000517238 TSHZ3Q63HK5 1081 aa-0.5□□□□□ -2.49
SNORA40.16-201ENST00000517238 METRNLQ641Q3 311 aa-0.5□□□□□ -2.49
SNORA40.16-201ENST00000517238 Q6ZS52 159 aa-0.5□□□□□ -2.49
SNORA40.16-201ENST00000517238 TSHZ1Q6ZSZ6 1077 aa-0.5□□□□□ -2.49
SNORA40.16-201ENST00000517238 TRILQ7L0X0 811 aa-0.5□□□□□ -2.49
SNORA40.16-201ENST00000517238 KRT26Q7Z3Y9 468 aa-0.5□□□□□ -2.49
SNORA40.16-201ENST00000517238 ERC1Q8IUD2 1116 aa-0.5□□□□□ -2.49
SNORA40.16-201ENST00000517238 RHOT2Q8IXI1 618 aa-0.5□□□□□ -2.49
SNORA40.16-201ENST00000517238 IL17RCQ8NAC3 791 aa-0.5□□□□□ -2.49
SNORA40.16-201ENST00000517238 DIO2Q92813 273 aa-0.5□□□□□ -2.49
SNORA40.16-201ENST00000517238 ATG4CQ96DT6 458 aa-0.5□□□□□ -2.49
SNORA40.16-201ENST00000517238 PHF21BQ96EK2 531 aa-0.5□□□□□ -2.49
SNORA40.16-201ENST00000517238 HIC2Q96JB3 615 aa-0.5□□□□□ -2.49
SNORA40.16-201ENST00000517238 BARD1Q99728 777 aaKnown RBP-0.5□□□□□ -2.49
SNORA40.16-201ENST00000517238 EBF4Q9BQW3 602 aa-0.5□□□□□ -2.49
SNORA40.16-201ENST00000517238 ZNF518BQ9C0D4 1074 aa-0.5□□□□□ -2.49
SNORA40.16-201ENST00000517238 C14orf93Q9H972 538 aaKnown RBP-0.5□□□□□ -2.49
SNORA40.16-201ENST00000517238 KLHL11Q9NVR0 708 aa-0.5□□□□□ -2.49
SNORA40.16-201ENST00000517238 ANAPC11Q9NYG5 84 aa-0.5□□□□□ -2.49
SNORA40.16-201ENST00000517238 MAGEL2Q9UJ55 1249 aa-0.5□□□□□ -2.49
SNORA40.16-201ENST00000517238 KCNE5Q9UJ90 142 aa-0.5□□□□□ -2.49
SNORA40.16-201ENST00000517238 NOC2LQ9Y3T9 749 aaKnown RBP-0.5□□□□□ -2.49
SNORA40.16-201ENST00000517238 PCDHA2Q9Y5H9 948 aa-0.5□□□□□ -2.49
SNORA40.16-201ENST00000517238 ZFHX2Q9C0A1 2572 aaPredicted RBP-0.5□□□□□ -2.49
SNORA40.16-201ENST00000517238 FBN2P35556 2912 aa-0.5□□□□□ -2.49
SNORA40.16-201ENST00000517238 A0A1B0GTW7 788 aa-0.51□□□□□ -2.49
SNORA40.16-201ENST00000517238 SPTLC2O15270 562 aa-0.51□□□□□ -2.49
SNORA40.16-201ENST00000517238 PROM1O43490 865 aa-0.51□□□□□ -2.49
SNORA40.16-201ENST00000517238 LATO43561 262 aa-0.51□□□□□ -2.49
SNORA40.16-201ENST00000517238 B4GALT2O60909 372 aa-0.51□□□□□ -2.49
SNORA40.16-201ENST00000517238 GPANK1O95872 356 aa-0.51□□□□□ -2.49
SNORA40.16-201ENST00000517238 GATA2P23769 480 aaPredicted RBP-0.51□□□□□ -2.49
SNORA40.16-201ENST00000517238 LMOD1P29536 600 aaPredicted RBP-0.51□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms