RNA–Protein interactions for RNA: ENST00000516419.1

SNORA48.9-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 162 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.9-201ENST00000516419 MATN4O95460 622 aa8.03□□□□□ -1.12
SNORA48.9-201ENST00000516419 KRT18P05783 430 aaKnown RBP8.03□□□□□ -1.12
SNORA48.9-201ENST00000516419 CKBP12277 381 aa8.03□□□□□ -1.12
SNORA48.9-201ENST00000516419 APOBEC3AP31941 199 aaPredicted RBP8.03□□□□□ -1.12
SNORA48.9-201ENST00000516419 FAM193AP78312 1265 aa8.03□□□□□ -1.12
SNORA48.9-201ENST00000516419 KIF22Q14807 665 aa8.03□□□□□ -1.12
SNORA48.9-201ENST00000516419 CNN3Q15417 329 aaKnown RBP8.03□□□□□ -1.12
SNORA48.9-201ENST00000516419 KHDC1LQ5JSQ8 128 aa8.03□□□□□ -1.12
SNORA48.9-201ENST00000516419 FAM102AQ5T9C2 384 aaPredicted RBP8.03□□□□□ -1.12
SNORA48.9-201ENST00000516419 DARS2Q6PI48 645 aaKnown RBP8.03□□□□□ -1.12
SNORA48.9-201ENST00000516419 TBC1D15Q8TC07 691 aa8.03□□□□□ -1.12
SNORA48.9-201ENST00000516419 TNPO1Q92973 898 aaKnown RBP8.03□□□□□ -1.12
SNORA48.9-201ENST00000516419 SARGQ9BW04 601 aa8.03□□□□□ -1.12
SNORA48.9-201ENST00000516419 STAP2Q9UGK3 403 aa8.03□□□□□ -1.12
SNORA48.9-201ENST00000516419 TSC22D4Q9Y3Q8 395 aa8.03□□□□□ -1.12
SNORA48.9-201ENST00000516419 GRXCR1A8MXD5 290 aa8.02□□□□□ -1.13
SNORA48.9-201ENST00000516419 AGFG2O95081 481 aa8.02□□□□□ -1.13
SNORA48.9-201ENST00000516419 AHSGP02765 367 aa8.02□□□□□ -1.13
SNORA48.9-201ENST00000516419 GCSHP23434 173 aa8.02□□□□□ -1.13
SNORA48.9-201ENST00000516419 PURAQ00577 322 aaKnown RBP8.02□□□□□ -1.13
SNORA48.9-201ENST00000516419 KIAA0753Q2KHM9 967 aa8.02□□□□□ -1.13
SNORA48.9-201ENST00000516419 EMC10Q5UCC4 262 aa8.02□□□□□ -1.13
SNORA48.9-201ENST00000516419 AGAP9Q5VTM2 703 aa8.02□□□□□ -1.13
SNORA48.9-201ENST00000516419 ZFPM1Q8IX07 1006 aa8.02□□□□□ -1.13
SNORA48.9-201ENST00000516419 CCAR1Q8IX12 1150 aaKnown RBP8.02□□□□□ -1.13
SNORA48.9-201ENST00000516419 RHOT2Q8IXI1 618 aa8.02□□□□□ -1.13
SNORA48.9-201ENST00000516419 NUP133Q8WUM0 1156 aa8.02□□□□□ -1.13
SNORA48.9-201ENST00000516419 NT5C1BQ96P26 610 aa8.02□□□□□ -1.13
SNORA48.9-201ENST00000516419 SLAMF7Q9NQ25 335 aa8.02□□□□□ -1.13
SNORA48.9-201ENST00000516419 DDX21Q9NR30 783 aaKnown RBP eCLIP8.02□□□□□ -1.13
SNORA48.9-201ENST00000516419 PCDHA6Q9UN73 950 aa8.02□□□□□ -1.13
SNORA48.9-201ENST00000516419 SORCS3Q9UPU3 1222 aa8.02□□□□□ -1.13
SNORA48.9-201ENST00000516419 A0A1W2PPL8 197 aa8.01□□□□□ -1.13
SNORA48.9-201ENST00000516419 CFAP69A5D8W1 941 aa8.01□□□□□ -1.13
SNORA48.9-201ENST00000516419 PRSS29PA6NIE9 313 aa8.01□□□□□ -1.13
SNORA48.9-201ENST00000516419 PHGDHO43175 533 aaKnown RBP8.01□□□□□ -1.13
SNORA48.9-201ENST00000516419 PRSS23O95084 383 aa8.01□□□□□ -1.13
SNORA48.9-201ENST00000516419 GJB1P08034 283 aa8.01□□□□□ -1.13
SNORA48.9-201ENST00000516419 TRIM27P14373 513 aa8.01□□□□□ -1.13
SNORA48.9-201ENST00000516419 RNASE9P60153 205 aaKnown RBP8.01□□□□□ -1.13
SNORA48.9-201ENST00000516419 CDSNQ15517 529 aa8.01□□□□□ -1.13
SNORA48.9-201ENST00000516419 RABL3Q5HYI8 236 aa8.01□□□□□ -1.13
SNORA48.9-201ENST00000516419 RNF220Q5VTB9 566 aa8.01□□□□□ -1.13
SNORA48.9-201ENST00000516419 SWSAP1Q6NVH7 229 aa8.01□□□□□ -1.13
SNORA48.9-201ENST00000516419 NEU1Q99519 415 aa8.01□□□□□ -1.13
SNORA48.9-201ENST00000516419 ZMAT3Q9HA38 289 aaKnown RBP8.01□□□□□ -1.13
SNORA48.9-201ENST00000516419 RSAD1Q9HA92 442 aa8.01□□□□□ -1.13
SNORA48.9-201ENST00000516419 ATP6V0A4Q9HBG4 840 aa8.01□□□□□ -1.13
SNORA48.9-201ENST00000516419 PIH1D1Q9NWS0 290 aaKnown RBP8.01□□□□□ -1.13
SNORA48.9-201ENST00000516419 CPA4Q9UI42 421 aa8.01□□□□□ -1.13
SNORA48.9-201ENST00000516419 SLC45A2Q9UMX9 530 aa8.01□□□□□ -1.13
SNORA48.9-201ENST00000516419 ATP11BQ9Y2G3 1177 aa8.01□□□□□ -1.13
SNORA48.9-201ENST00000516419 GOLIM4O00461 696 aa8□□□□□ -1.13
SNORA48.9-201ENST00000516419 SCAF4O95104 1147 aaKnown RBP8□□□□□ -1.13
SNORA48.9-201ENST00000516419 MYL1P05976 194 aa8□□□□□ -1.13
SNORA48.9-201ENST00000516419 RARBP10826 455 aa8□□□□□ -1.13
SNORA48.9-201ENST00000516419 SOX8P57073 446 aa8□□□□□ -1.13
SNORA48.9-201ENST00000516419 NOMO3P69849 1222 aa8□□□□□ -1.13
SNORA48.9-201ENST00000516419 TOB2Q14106 344 aaPredicted RBP8□□□□□ -1.13
SNORA48.9-201ENST00000516419 NOMO2Q5JPE7 1267 aa8□□□□□ -1.13
SNORA48.9-201ENST00000516419 TSHZ3Q63HK5 1081 aa8□□□□□ -1.13
SNORA48.9-201ENST00000516419 KSR2Q6VAB6 950 aa8□□□□□ -1.13
SNORA48.9-201ENST00000516419 C1orf210Q8IVY1 113 aa8□□□□□ -1.13
SNORA48.9-201ENST00000516419 SCAMP4Q969E2 229 aa8□□□□□ -1.13
SNORA48.9-201ENST00000516419 ZNF703Q9H7S9 590 aaPredicted RBP8□□□□□ -1.13
SNORA48.9-201ENST00000516419 ARNT2Q9HBZ2 717 aa8□□□□□ -1.13
SNORA48.9-201ENST00000516419 GPR35Q9HC97 309 aa8□□□□□ -1.13
SNORA48.9-201ENST00000516419 CHST2Q9Y4C5 530 aa8□□□□□ -1.13
SNORA48.9-201ENST00000516419 USP15Q9Y4E8 981 aaPredicted RBP8□□□□□ -1.13
SNORA48.9-201ENST00000516419 PLSCR1O15162 318 aa7.99□□□□□ -1.13
SNORA48.9-201ENST00000516419 FRS3O43559 492 aa7.99□□□□□ -1.13
SNORA48.9-201ENST00000516419 SPATA31D3P0C874 917 aa7.99□□□□□ -1.13
SNORA48.9-201ENST00000516419 PHKA1P46020 1223 aa7.99□□□□□ -1.13
SNORA48.9-201ENST00000516419 PTTG1IPP53801 180 aa7.99□□□□□ -1.13
SNORA48.9-201ENST00000516419 USP39Q53GS9 565 aaKnown RBP7.99□□□□□ -1.13
SNORA48.9-201ENST00000516419 SPDYAQ5MJ70 313 aa7.99□□□□□ -1.13
SNORA48.9-201ENST00000516419 SPATA31D4Q6ZUB0 917 aa7.99□□□□□ -1.13
SNORA48.9-201ENST00000516419 GDF7Q7Z4P5 450 aa7.99□□□□□ -1.13
SNORA48.9-201ENST00000516419 COL23A1Q86Y22 540 aaPredicted RBP7.99□□□□□ -1.13
SNORA48.9-201ENST00000516419 IL31RAQ8NI17 732 aa7.99□□□□□ -1.13
SNORA48.9-201ENST00000516419 IL17DQ8TAD2 202 aa7.99□□□□□ -1.13
SNORA48.9-201ENST00000516419 CPT1CQ8TCG5 803 aa7.99□□□□□ -1.13
SNORA48.9-201ENST00000516419 LRTOMTQ8WZ04 291 aa7.99□□□□□ -1.13
SNORA48.9-201ENST00000516419 EXTL1Q92935 676 aa7.99□□□□□ -1.13
SNORA48.9-201ENST00000516419 MRGPRX1Q96LB2 322 aa7.99□□□□□ -1.13
SNORA48.9-201ENST00000516419 KLHL32Q96NJ5 620 aa7.99□□□□□ -1.13
SNORA48.9-201ENST00000516419 PNKPQ96T60 521 aa7.99□□□□□ -1.13
SNORA48.9-201ENST00000516419 C22orf23Q9BZE7 217 aa7.99□□□□□ -1.13
SNORA48.9-201ENST00000516419 BHMT2Q9H2M3 363 aa7.99□□□□□ -1.13
SNORA48.9-201ENST00000516419 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.99□□□□□ -1.13
SNORA48.9-201ENST00000516419 KLHL11Q9NVR0 708 aa7.99□□□□□ -1.13
SNORA48.9-201ENST00000516419 PARPBPQ9NWS1 579 aa7.99□□□□□ -1.13
SNORA48.9-201ENST00000516419 TRPM5Q9NZQ8 1165 aa7.99□□□□□ -1.13
SNORA48.9-201ENST00000516419 ZNF185O15231 689 aa7.98□□□□□ -1.13
SNORA48.9-201ENST00000516419 MGEA5O60502 916 aa7.98□□□□□ -1.13
SNORA48.9-201ENST00000516419 CHEK2O96017 543 aa7.98□□□□□ -1.13
SNORA48.9-201ENST00000516419 GNAI2P04899 355 aa7.98□□□□□ -1.13
SNORA48.9-201ENST00000516419 HDCP19113 662 aa7.98□□□□□ -1.13
SNORA48.9-201ENST00000516419 PSMC1P62191 440 aaKnown RBP7.98□□□□□ -1.13
SNORA48.9-201ENST00000516419 EXOSC9Q06265 439 aaKnown RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms