RNA–Protein interactions for RNA: ENST00000516400.1

RNU1-48P-201, Transcript of RNA, U1 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU1-48P, Length 162 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-48P-201ENST00000516400 GORABQ5T7V8 394 aa2.7□□□□□ -1.98
RNU1-48P-201ENST00000516400 PLPPR4Q7Z2D5 763 aa2.7□□□□□ -1.98
RNU1-48P-201ENST00000516400 MAMDC2Q7Z304 686 aaPredicted RBP2.7□□□□□ -1.98
RNU1-48P-201ENST00000516400 HS6ST3Q8IZP7 471 aa2.7□□□□□ -1.98
RNU1-48P-201ENST00000516400 CMTR1Q8N1G2 835 aaKnown RBP2.7□□□□□ -1.98
RNU1-48P-201ENST00000516400 RPLP0P6Q8NHW5 317 aa2.7□□□□□ -1.98
RNU1-48P-201ENST00000516400 TTC8Q8TAM2 541 aa2.7□□□□□ -1.98
RNU1-48P-201ENST00000516400 PIGOQ8TEQ8 1089 aa2.7□□□□□ -1.98
RNU1-48P-201ENST00000516400 USP33Q8TEY7 942 aa2.7□□□□□ -1.98
RNU1-48P-201ENST00000516400 SSC4DQ8WTU2 575 aa2.7□□□□□ -1.98
RNU1-48P-201ENST00000516400 SEPT1Q8WYJ6 367 aa2.7□□□□□ -1.98
RNU1-48P-201ENST00000516400 ZNF578Q96N58 590 aaPredicted RBP2.7□□□□□ -1.98
RNU1-48P-201ENST00000516400 CEP89Q96ST8 783 aa2.7□□□□□ -1.98
RNU1-48P-201ENST00000516400 CDC6Q99741 560 aa2.7□□□□□ -1.98
RNU1-48P-201ENST00000516400 TMEM47Q9BQJ4 181 aa2.7□□□□□ -1.98
RNU1-48P-201ENST00000516400 PAAF1Q9BRP4 392 aa2.7□□□□□ -1.98
RNU1-48P-201ENST00000516400 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP2.7□□□□□ -1.98
RNU1-48P-201ENST00000516400 TMUB1Q9BVT8 246 aa2.7□□□□□ -1.98
RNU1-48P-201ENST00000516400 SLC25A18Q9H1K4 315 aa2.7□□□□□ -1.98
RNU1-48P-201ENST00000516400 SMARCAD1Q9H4L7 1026 aa2.7□□□□□ -1.98
RNU1-48P-201ENST00000516400 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.7□□□□□ -1.98
RNU1-48P-201ENST00000516400 TM7SF3Q9NS93 570 aa2.7□□□□□ -1.98
RNU1-48P-201ENST00000516400 RYDENQ9NUL5 291 aaKnown RBP2.7□□□□□ -1.98
RNU1-48P-201ENST00000516400 MAP3K20Q9NYL2 800 aaKnown RBP2.7□□□□□ -1.98
RNU1-48P-201ENST00000516400 DONSONQ9NYP3 566 aa2.7□□□□□ -1.98
RNU1-48P-201ENST00000516400 ARPP21Q9UBL0 812 aaPredicted RBP2.7□□□□□ -1.98
RNU1-48P-201ENST00000516400 ZNF215Q9UL58 517 aaPredicted RBP2.7□□□□□ -1.98
RNU1-48P-201ENST00000516400 SSX2IPQ9Y2D8 614 aa2.7□□□□□ -1.98
RNU1-48P-201ENST00000516400 FAN1Q9Y2M0 1017 aa2.7□□□□□ -1.98
RNU1-48P-201ENST00000516400 NOP58Q9Y2X3 529 aaKnown RBP2.7□□□□□ -1.98
RNU1-48P-201ENST00000516400 SLCO1B1Q9Y6L6 691 aa2.7□□□□□ -1.98
RNU1-48P-201ENST00000516400 TDRD6O60522 2096 aaKnown RBP2.7□□□□□ -1.98
RNU1-48P-201ENST00000516400 TLN2Q9Y4G6 2542 aa2.7□□□□□ -1.98
RNU1-48P-201ENST00000516400 ABCB11O95342 1321 aa2.69□□□□□ -1.98
RNU1-48P-201ENST00000516400 MN1Q10571 1320 aaPredicted RBP2.69□□□□□ -1.98
RNU1-48P-201ENST00000516400 CCDC171Q6TFL3 1326 aa2.69□□□□□ -1.98
RNU1-48P-201ENST00000516400 PHLPP2Q6ZVD8 1323 aa2.69□□□□□ -1.98
RNU1-48P-201ENST00000516400 DIDO1Q9BTC0 2240 aaKnown RBP2.69□□□□□ -1.98
RNU1-48P-201ENST00000516400 POLEQ07864 2286 aa2.69□□□□□ -1.98
RNU1-48P-201ENST00000516400 C10orf142B7Z368 130 aa2.69□□□□□ -1.98
RNU1-48P-201ENST00000516400 TRAK2O60296 914 aa2.69□□□□□ -1.98
RNU1-48P-201ENST00000516400 LZTS3O60299 673 aaPredicted RBP2.69□□□□□ -1.98
RNU1-48P-201ENST00000516400 ADAM23O75077 832 aa2.69□□□□□ -1.98
RNU1-48P-201ENST00000516400 CILPO75339 1184 aa2.69□□□□□ -1.98
RNU1-48P-201ENST00000516400 CSDE1O75534 798 aaKnown RBP2.69□□□□□ -1.98
RNU1-48P-201ENST00000516400 LUC7L3O95232 432 aaKnown RBP2.69□□□□□ -1.98
RNU1-48P-201ENST00000516400 SEC24AO95486 1093 aa2.69□□□□□ -1.98
RNU1-48P-201ENST00000516400 VNN2O95498 520 aa2.69□□□□□ -1.98
RNU1-48P-201ENST00000516400 LDLRP01130 860 aa2.69□□□□□ -1.98
RNU1-48P-201ENST00000516400 VTNP04004 478 aa2.69□□□□□ -1.98
RNU1-48P-201ENST00000516400 PRKCGP05129 697 aa2.69□□□□□ -1.98
RNU1-48P-201ENST00000516400 CFIP05156 583 aa2.69□□□□□ -1.98
RNU1-48P-201ENST00000516400 URODP06132 367 aa2.69□□□□□ -1.98
RNU1-48P-201ENST00000516400 FAM87AP0C7U9 286 aa2.69□□□□□ -1.98
RNU1-48P-201ENST00000516400 MYCLP12524 364 aaPredicted RBP2.69□□□□□ -1.98
RNU1-48P-201ENST00000516400 DARSP14868 501 aaKnown RBP2.69□□□□□ -1.98
RNU1-48P-201ENST00000516400 GJA1P17302 382 aa2.69□□□□□ -1.98
RNU1-48P-201ENST00000516400 WT1P19544 449 aaPredicted RBP2.69□□□□□ -1.98
RNU1-48P-201ENST00000516400 FGFR4P22455 802 aa2.69□□□□□ -1.98
RNU1-48P-201ENST00000516400 DPP6P42658 865 aa2.69□□□□□ -1.98
RNU1-48P-201ENST00000516400 DGKEP52429 567 aa2.69□□□□□ -1.98
RNU1-48P-201ENST00000516400 ERVPABLB-1P60509 514 aa2.69□□□□□ -1.98
RNU1-48P-201ENST00000516400 IGBP1P78318 339 aa2.69□□□□□ -1.98
RNU1-48P-201ENST00000516400 RNASELQ05823 741 aaKnown RBP2.69□□□□□ -1.98
RNU1-48P-201ENST00000516400 SPIRE1Q08AE8 756 aa2.69□□□□□ -1.98
RNU1-48P-201ENST00000516400 MESP2Q0VG99 397 aa2.69□□□□□ -1.98
RNU1-48P-201ENST00000516400 SRSF6Q13247 344 aaKnown RBP2.69□□□□□ -1.98
RNU1-48P-201ENST00000516400 UBE3CQ15386 1083 aa2.69□□□□□ -1.98
RNU1-48P-201ENST00000516400 SHBQ15464 509 aa2.69□□□□□ -1.98
RNU1-48P-201ENST00000516400 HLA-BQ31612 363 aa2.69□□□□□ -1.98
RNU1-48P-201ENST00000516400 USP41Q3LFD5 358 aa2.69□□□□□ -1.98
RNU1-48P-201ENST00000516400 USH1GQ495M9 461 aa2.69□□□□□ -1.98
RNU1-48P-201ENST00000516400 KCNT1Q5JUK3 1230 aa2.69□□□□□ -1.98
RNU1-48P-201ENST00000516400 PPM1LQ5SGD2 360 aa2.69□□□□□ -1.98
RNU1-48P-201ENST00000516400 C6orf118Q5T5N4 469 aa2.69□□□□□ -1.98
RNU1-48P-201ENST00000516400 CDCP2Q5VXM1 449 aa2.69□□□□□ -1.98
RNU1-48P-201ENST00000516400 LYSMD4Q5XG99 296 aa2.69□□□□□ -1.98
RNU1-48P-201ENST00000516400 CAPRIN2Q6IMN6 1127 aaKnown RBP2.69□□□□□ -1.98
RNU1-48P-201ENST00000516400 FUT10Q6P4F1 479 aa2.69□□□□□ -1.98
RNU1-48P-201ENST00000516400 ARMCX6Q7L4S7 300 aa2.69□□□□□ -1.98
RNU1-48P-201ENST00000516400 LPCAT2Q7L5N7 544 aa2.69□□□□□ -1.98
RNU1-48P-201ENST00000516400 GLYCTKQ8IVS8 523 aa2.69□□□□□ -1.98
RNU1-48P-201ENST00000516400 DHX40Q8IX18 779 aaKnown RBP2.69□□□□□ -1.98
RNU1-48P-201ENST00000516400 ABI1Q8IZP0 508 aa2.69□□□□□ -1.98
RNU1-48P-201ENST00000516400 SMG8Q8ND04 991 aaKnown RBP2.69□□□□□ -1.98
RNU1-48P-201ENST00000516400 SLC7A14Q8TBB6 771 aa2.69□□□□□ -1.98
RNU1-48P-201ENST00000516400 ZSCAN18Q8TBC5 510 aaPredicted RBP2.69□□□□□ -1.98
RNU1-48P-201ENST00000516400 ZNF564Q8TBZ8 553 aaPredicted RBP2.69□□□□□ -1.98
RNU1-48P-201ENST00000516400 SSH3Q8TE77 659 aa2.69□□□□□ -1.98
RNU1-48P-201ENST00000516400 RHBDD1Q8TEB9 315 aa2.69□□□□□ -1.98
RNU1-48P-201ENST00000516400 HTR3CQ8WXA8 447 aa2.69□□□□□ -1.98
RNU1-48P-201ENST00000516400 EXTL1Q92935 676 aa2.69□□□□□ -1.98
RNU1-48P-201ENST00000516400 TCTN2Q96GX1 697 aa2.69□□□□□ -1.98
RNU1-48P-201ENST00000516400 NAF1Q96HR8 494 aaKnown RBP2.69□□□□□ -1.98
RNU1-48P-201ENST00000516400 DNAJC2Q99543 621 aaKnown RBP2.69□□□□□ -1.98
RNU1-48P-201ENST00000516400 FUCA2Q9BTY2 467 aa2.69□□□□□ -1.98
RNU1-48P-201ENST00000516400 POLR3CQ9BUI4 534 aaPredicted RBP2.69□□□□□ -1.98
RNU1-48P-201ENST00000516400 REPIN1Q9BWE0 567 aaKnown RBP2.69□□□□□ -1.98
RNU1-48P-201ENST00000516400 TMEM245Q9H330 911 aa2.69□□□□□ -1.98
RNU1-48P-201ENST00000516400 JMJD4Q9H9V9 463 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms