RNA–Protein interactions for RNA: ENST00000515587.1

PDCD6-211, Transcript of programmed cell death 6, humanhuman

TSL 1 (best)

Gene PDCD6, Length 855 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-211ENST00000515587 ARMCX3Q9UH62 379 aaPredicted RBP16.3■□□□□ 0.2
PDCD6-211ENST00000515587 COL4A4P53420 1690 aaPredicted RBP16.3■□□□□ 0.2
PDCD6-211ENST00000515587 H3BNC9 293 aa16.29■□□□□ 0.2
PDCD6-211ENST00000515587 STX10O60499 249 aa16.29■□□□□ 0.2
PDCD6-211ENST00000515587 B3GAT3O94766 335 aa16.29■□□□□ 0.2
PDCD6-211ENST00000515587 LRPAP1P30533 357 aa16.29■□□□□ 0.2
PDCD6-211ENST00000515587 PLCB3Q01970 1234 aa16.29■□□□□ 0.2
PDCD6-211ENST00000515587 UBE3AQ05086 875 aa16.29■□□□□ 0.2
PDCD6-211ENST00000515587 ENPEPQ07075 957 aa16.29■□□□□ 0.2
PDCD6-211ENST00000515587 BFSP1Q12934 665 aa16.29■□□□□ 0.2
PDCD6-211ENST00000515587 BMS1Q14692 1282 aaKnown RBP16.29■□□□□ 0.2
PDCD6-211ENST00000515587 UPP1Q16831 310 aa16.29■□□□□ 0.2
PDCD6-211ENST00000515587 FRMD5Q7Z6J6 570 aa16.29■□□□□ 0.2
PDCD6-211ENST00000515587 FAM114A1Q8IWE2 563 aa16.29■□□□□ 0.2
PDCD6-211ENST00000515587 PARD3BQ8TEW8 1205 aa16.29■□□□□ 0.2
PDCD6-211ENST00000515587 RABGGTAQ92696 567 aa16.29■□□□□ 0.2
PDCD6-211ENST00000515587 ADAM28Q9UKQ2 775 aa16.29■□□□□ 0.2
PDCD6-211ENST00000515587 ITGA11Q9UKX5 1188 aa16.29■□□□□ 0.2
PDCD6-211ENST00000515587 LZTS1Q9Y250 596 aa16.29■□□□□ 0.2
PDCD6-211ENST00000515587 NUB1Q9Y5A7 615 aa16.29■□□□□ 0.2
PDCD6-211ENST00000515587 SF3B1O75533 1304 aaKnown RBP eCLIP16.28■□□□□ 0.24e-8■■■■■ 68.9
PDCD6-211ENST00000515587 LRRIQ3A6PVS8 624 aaPredicted RBP16.28■□□□□ 0.2
PDCD6-211ENST00000515587 IKBKBO14920 756 aa16.28■□□□□ 0.2
PDCD6-211ENST00000515587 TRAPPC3O43617 180 aa16.28■□□□□ 0.2
PDCD6-211ENST00000515587 PHACTR2O75167 634 aa16.28■□□□□ 0.2
PDCD6-211ENST00000515587 ITGB1P05556 798 aa16.28■□□□□ 0.2
PDCD6-211ENST00000515587 PAX3P23760 479 aa16.28■□□□□ 0.2
PDCD6-211ENST00000515587 WNT7BP56706 349 aa16.28■□□□□ 0.2
PDCD6-211ENST00000515587 ELAVL2Q12926 359 aaKnown RBP16.28■□□□□ 0.2
PDCD6-211ENST00000515587 PTPROQ16827 1216 aa16.28■□□□□ 0.2
PDCD6-211ENST00000515587 ANO6Q4KMQ2 910 aa16.28■□□□□ 0.2
PDCD6-211ENST00000515587 LMBRD2Q68DH5 695 aaPredicted RBP16.28■□□□□ 0.2
PDCD6-211ENST00000515587 GDPD5Q8WTR4 605 aa16.28■□□□□ 0.2
PDCD6-211ENST00000515587 POP1Q99575 1024 aaKnown RBP16.28■□□□□ 0.2
PDCD6-211ENST00000515587 PAAF1Q9BRP4 392 aa16.28■□□□□ 0.2
PDCD6-211ENST00000515587 MTMR12Q9C0I1 747 aa16.28■□□□□ 0.2
PDCD6-211ENST00000515587 LMAN2LQ9H0V9 348 aa16.28■□□□□ 0.2
PDCD6-211ENST00000515587 DNAJC25Q9H1X3 360 aa16.28■□□□□ 0.2
PDCD6-211ENST00000515587 ALG13Q9NP73 1137 aaKnown RBP16.28■□□□□ 0.2
PDCD6-211ENST00000515587 MAGEC2Q9UBF1 373 aaPredicted RBP16.28■□□□□ 0.2
PDCD6-211ENST00000515587 CACNG4Q9UBN1 327 aa16.28■□□□□ 0.2
PDCD6-211ENST00000515587 TMEM189-UBE2V1I3L0A0 370 aa16.27■□□□□ 0.2
PDCD6-211ENST00000515587 KIF4AO95239 1232 aa16.27■□□□□ 0.2
PDCD6-211ENST00000515587 ITGB3P05106 788 aa16.27■□□□□ 0.2
PDCD6-211ENST00000515587 KRT19P08727 400 aa16.27■□□□□ 0.2
PDCD6-211ENST00000515587 PNPLA4P41247 253 aa16.27■□□□□ 0.2
PDCD6-211ENST00000515587 GUCY2FP51841 1108 aa16.27■□□□□ 0.2
PDCD6-211ENST00000515587 RBP5P82980 135 aa16.27■□□□□ 0.2
PDCD6-211ENST00000515587 BIRC3Q13489 604 aa16.27■□□□□ 0.2
PDCD6-211ENST00000515587 DCAF17Q5H9S7 520 aaPredicted RBP16.27■□□□□ 0.2
PDCD6-211ENST00000515587 TCERG1LQ5VWI1 586 aa16.27■□□□□ 0.2
PDCD6-211ENST00000515587 C9orf57Q5W0N0 161 aa16.27■□□□□ 0.2
PDCD6-211ENST00000515587 C11orf57Q6ZUT1 292 aaPredicted RBP16.27■□□□□ 0.2
PDCD6-211ENST00000515587 DDX53Q86TM3 631 aaKnown RBP16.27■□□□□ 0.2
PDCD6-211ENST00000515587 OR5B17Q8NGF7 314 aa16.27■□□□□ 0.2
PDCD6-211ENST00000515587 ENOX1Q8TC92 643 aaKnown RBP16.27■□□□□ 0.2
PDCD6-211ENST00000515587 HASPINQ8TF76 798 aa16.27■□□□□ 0.2
PDCD6-211ENST00000515587 POF1BQ8WVV4 589 aa16.27■□□□□ 0.2
PDCD6-211ENST00000515587 ZNF560Q96MR9 790 aa16.27■□□□□ 0.2
PDCD6-211ENST00000515587 THAP9Q9H5L6 903 aa16.27■□□□□ 0.2
PDCD6-211ENST00000515587 MARCH5Q9NX47 278 aa16.27■□□□□ 0.2
PDCD6-211ENST00000515587 PTPRJQ12913 1337 aa16.26■□□□□ 0.19
PDCD6-211ENST00000515587 GRM6O15303 877 aa16.26■□□□□ 0.19
PDCD6-211ENST00000515587 LPXNO60711 386 aa16.26■□□□□ 0.19
PDCD6-211ENST00000515587 TRIM49P0CI25 452 aa16.26■□□□□ 0.19
PDCD6-211ENST00000515587 TRIM49CP0CI26 452 aa16.26■□□□□ 0.19
PDCD6-211ENST00000515587 POLR2BP30876 1174 aaKnown RBP16.26■□□□□ 0.19
PDCD6-211ENST00000515587 GTF2H1P32780 548 aa16.26■□□□□ 0.19
PDCD6-211ENST00000515587 DLG4P78352 724 aa16.26■□□□□ 0.19
PDCD6-211ENST00000515587 CLDN10P78369 228 aa16.26■□□□□ 0.19
PDCD6-211ENST00000515587 MYL5Q02045 173 aa16.26■□□□□ 0.19
PDCD6-211ENST00000515587 MYO1EQ12965 1108 aa16.26■□□□□ 0.19
PDCD6-211ENST00000515587 TRPC3Q13507 836 aa16.26■□□□□ 0.19
PDCD6-211ENST00000515587 FUT10Q6P4F1 479 aa16.26■□□□□ 0.19
PDCD6-211ENST00000515587 TRAPPC11Q7Z392 1133 aa16.26■□□□□ 0.19
PDCD6-211ENST00000515587 TMEM173Q86WV6 379 aaPredicted RBP16.26■□□□□ 0.19
PDCD6-211ENST00000515587 CREBRFQ8IUR6 639 aa16.26■□□□□ 0.19
PDCD6-211ENST00000515587 PIAS4Q8N2W9 510 aaPredicted RBP16.26■□□□□ 0.19
PDCD6-211ENST00000515587 C1orf127Q8N9H9 656 aa16.26■□□□□ 0.19
PDCD6-211ENST00000515587 SPPL3Q8TCT6 385 aa16.26■□□□□ 0.19
PDCD6-211ENST00000515587 PLEKHO2Q8TD55 490 aa16.26■□□□□ 0.19
PDCD6-211ENST00000515587 BCL7CQ8WUZ0 217 aaPredicted RBP16.26■□□□□ 0.19
PDCD6-211ENST00000515587 BORCS6Q96GS4 357 aa16.26■□□□□ 0.19
PDCD6-211ENST00000515587 AGAP1Q9UPQ3 857 aa16.26■□□□□ 0.19
PDCD6-211ENST00000515587 SCN1AP35498 2009 aa16.26■□□□□ 0.19
PDCD6-211ENST00000515587 ANO9A1A5B4 782 aa16.25■□□□□ 0.19
PDCD6-211ENST00000515587 ARHGEF37A1IGU5 675 aa16.25■□□□□ 0.19
PDCD6-211ENST00000515587 EPOPA6NHQ4 379 aa16.25■□□□□ 0.19
PDCD6-211ENST00000515587 F8W810 466 aa16.25■□□□□ 0.19
PDCD6-211ENST00000515587 RFXAPO00287 272 aa16.25■□□□□ 0.19
PDCD6-211ENST00000515587 PIRO00625 290 aa16.25■□□□□ 0.19
PDCD6-211ENST00000515587 CLSTN1O94985 981 aa16.25■□□□□ 0.19
PDCD6-211ENST00000515587 CAVIN2O95810 425 aa16.25■□□□□ 0.19
PDCD6-211ENST00000515587 TAF6P49848 677 aa16.25■□□□□ 0.19
PDCD6-211ENST00000515587 SV2CQ496J9 727 aa16.25■□□□□ 0.19
PDCD6-211ENST00000515587 PDE12Q6L8Q7 609 aaKnown RBP16.25■□□□□ 0.19
PDCD6-211ENST00000515587 KIAA1841Q6NSI8 718 aa16.25■□□□□ 0.19
PDCD6-211ENST00000515587 DSTYKQ6XUX3 929 aa16.25■□□□□ 0.19
PDCD6-211ENST00000515587 TMC7Q7Z402 723 aa16.25■□□□□ 0.19
PDCD6-211ENST00000515587 VPS52Q8N1B4 723 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms