RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 ABLIM3O94929 683 aa14.85□□□□□ -0.03
TCOF1-215ENST00000515516 SRFP11831 508 aa14.85□□□□□ -0.03
TCOF1-215ENST00000515516 GAP43P17677 238 aa14.85□□□□□ -0.03
TCOF1-215ENST00000515516 PTPN2P17706 415 aa14.85□□□□□ -0.03
TCOF1-215ENST00000515516 LRPAP1P30533 357 aa14.85□□□□□ -0.03
TCOF1-215ENST00000515516 YWHAHQ04917 246 aaPredicted RBP14.85□□□□□ -0.03
TCOF1-215ENST00000515516 MRPL58Q14197 206 aaKnown RBP14.85□□□□□ -0.03
TCOF1-215ENST00000515516 POSTNQ15063 836 aa14.85□□□□□ -0.03
TCOF1-215ENST00000515516 ENOX2Q16206 610 aaKnown RBP14.85□□□□□ -0.03
TCOF1-215ENST00000515516 ZC2HC1CQ53FD0 456 aaPredicted RBP14.85□□□□□ -0.03
TCOF1-215ENST00000515516 TPGS2Q68CL5 300 aa14.85□□□□□ -0.03
TCOF1-215ENST00000515516 ZNF720Q7Z2F6 126 aa14.85□□□□□ -0.03
TCOF1-215ENST00000515516 SFR1Q86XK3 245 aa14.85□□□□□ -0.03
TCOF1-215ENST00000515516 HSCBQ8IWL3 235 aa14.85□□□□□ -0.03
TCOF1-215ENST00000515516 FGF13Q92913 245 aa14.85□□□□□ -0.03
TCOF1-215ENST00000515516 HVCN1Q96D96 273 aa14.85□□□□□ -0.03
TCOF1-215ENST00000515516 USP28Q96RU2 1077 aa14.85□□□□□ -0.03
TCOF1-215ENST00000515516 ST6GALNAC4Q9H4F1 302 aa14.85□□□□□ -0.03
TCOF1-215ENST00000515516 FBXL5Q9UKA1 691 aa14.85□□□□□ -0.03
TCOF1-215ENST00000515516 AGO2Q9UKV8 859 aaKnown RBP14.85□□□□□ -0.03
TCOF1-215ENST00000515516 MAFFQ9ULX9 164 aa14.85□□□□□ -0.03
TCOF1-215ENST00000515516 MRPS23Q9Y3D9 190 aaKnown RBP14.85□□□□□ -0.03
TCOF1-215ENST00000515516 NUMBLQ9Y6R0 609 aa14.85□□□□□ -0.03
TCOF1-215ENST00000515516 ARHGEF37A1IGU5 675 aa14.84□□□□□ -0.03
TCOF1-215ENST00000515516 WDR27A2RRH5 827 aa14.84□□□□□ -0.03
TCOF1-215ENST00000515516 ANHXE9PGG2 379 aa14.84□□□□□ -0.03
TCOF1-215ENST00000515516 GALR2O43603 387 aaPredicted RBP14.84□□□□□ -0.03
TCOF1-215ENST00000515516 TBC1D4O60343 1298 aa14.84□□□□□ -0.03
TCOF1-215ENST00000515516 PDIA4P13667 645 aaKnown RBP14.84□□□□□ -0.03
TCOF1-215ENST00000515516 IDEP14735 1019 aa14.84□□□□□ -0.03
TCOF1-215ENST00000515516 CPB1P15086 417 aa14.84□□□□□ -0.03
TCOF1-215ENST00000515516 ATF2P15336 505 aa14.84□□□□□ -0.03
TCOF1-215ENST00000515516 PAX3P23760 479 aa14.84□□□□□ -0.03
TCOF1-215ENST00000515516 MRE11P49959 708 aa14.84□□□□□ -0.03
TCOF1-215ENST00000515516 HTR4Q13639 388 aa14.84□□□□□ -0.03
TCOF1-215ENST00000515516 ZBTB6Q15916 424 aa14.84□□□□□ -0.03
TCOF1-215ENST00000515516 ZBTB41Q5SVQ8 909 aa14.84□□□□□ -0.03
TCOF1-215ENST00000515516 TCEAL8Q8IYN2 117 aa14.84□□□□□ -0.03
TCOF1-215ENST00000515516 TMEM105Q8N8V8 129 aa14.84□□□□□ -0.03
TCOF1-215ENST00000515516 ITFG1Q8TB96 612 aa14.84□□□□□ -0.03
TCOF1-215ENST00000515516 POMGNT1Q8WZA1 660 aa14.84□□□□□ -0.03
TCOF1-215ENST00000515516 ATOH1Q92858 354 aaPredicted RBP14.84□□□□□ -0.03
TCOF1-215ENST00000515516 SNX21Q969T3 373 aa14.84□□□□□ -0.03
TCOF1-215ENST00000515516 ACCSQ96QU6 501 aa14.84□□□□□ -0.03
TCOF1-215ENST00000515516 FIZ1Q96SL8 496 aa14.84□□□□□ -0.03
TCOF1-215ENST00000515516 RTP3Q9BQQ7 232 aa14.84□□□□□ -0.03
TCOF1-215ENST00000515516 PANK2Q9BZ23 570 aa14.84□□□□□ -0.03
TCOF1-215ENST00000515516 DNMT3BQ9UBC3 853 aaKnown RBP14.84□□□□□ -0.03
TCOF1-215ENST00000515516 CPSF3Q9UKF6 684 aaKnown RBP14.84□□□□□ -0.03
TCOF1-215ENST00000515516 DERAQ9Y315 318 aa14.84□□□□□ -0.03
TCOF1-215ENST00000515516 PCDHB13Q9Y5F0 798 aa14.84□□□□□ -0.03
TCOF1-215ENST00000515516 MORC2Q9Y6X9 1032 aaPredicted RBP14.84□□□□□ -0.03
TCOF1-215ENST00000515516 MYMKA6NI61 221 aa14.83□□□□□ -0.04
TCOF1-215ENST00000515516 ANKRD63C9JTQ0 380 aa14.83□□□□□ -0.04
TCOF1-215ENST00000515516 M0QZQ0 153 aa14.83□□□□□ -0.04
TCOF1-215ENST00000515516 ZNF197O14709 1029 aa14.83□□□□□ -0.04
TCOF1-215ENST00000515516 GCNT3O95395 438 aa14.83□□□□□ -0.04
TCOF1-215ENST00000515516 ADRB2P07550 413 aa14.83□□□□□ -0.04
TCOF1-215ENST00000515516 RHOP08100 348 aa14.83□□□□□ -0.04
TCOF1-215ENST00000515516 ACOT2P49753 483 aa14.83□□□□□ -0.04
TCOF1-215ENST00000515516 ADCY1Q08828 1119 aa14.83□□□□□ -0.04
TCOF1-215ENST00000515516 TCF15Q12870 199 aa14.83□□□□□ -0.04
TCOF1-215ENST00000515516 TMEM132DQ14C87 1099 aa14.83□□□□□ -0.04
TCOF1-215ENST00000515516 SPATA1Q5VX52 437 aa14.83□□□□□ -0.04
TCOF1-215ENST00000515516 JADE1Q6IE81 842 aa14.83□□□□□ -0.04
TCOF1-215ENST00000515516 IQCEQ6IPM2 695 aa14.83□□□□□ -0.04
TCOF1-215ENST00000515516 SLC39A4Q6P5W5 647 aa14.83□□□□□ -0.04
TCOF1-215ENST00000515516 SYCP3Q8IZU3 236 aa14.83□□□□□ -0.04
TCOF1-215ENST00000515516 LRRC27Q9C0I9 530 aa14.83□□□□□ -0.04
TCOF1-215ENST00000515516 ASB7Q9H672 318 aa14.83□□□□□ -0.04
TCOF1-215ENST00000515516 HCFC1R1Q9NWW0 138 aa14.83□□□□□ -0.04
TCOF1-215ENST00000515516 AFF4Q9UHB7 1163 aaKnown RBP14.83□□□□□ -0.04
TCOF1-215ENST00000515516 CA14Q9ULX7 337 aa14.83□□□□□ -0.04
TCOF1-215ENST00000515516 OR6C75A6NL08 312 aa14.82□□□□□ -0.04
TCOF1-215ENST00000515516 SPTLC2O15270 562 aa14.82□□□□□ -0.04
TCOF1-215ENST00000515516 FAM189A1O60320 539 aa14.82□□□□□ -0.04
TCOF1-215ENST00000515516 OAZ2O95190 189 aa14.82□□□□□ -0.04
TCOF1-215ENST00000515516 ODC1P11926 461 aa14.82□□□□□ -0.04
TCOF1-215ENST00000515516 AOC1P19801 751 aa14.82□□□□□ -0.04
TCOF1-215ENST00000515516 NASPP49321 788 aaPredicted RBP14.82□□□□□ -0.04
TCOF1-215ENST00000515516 GUCY2FP51841 1108 aa14.82□□□□□ -0.04
TCOF1-215ENST00000515516 POU5F1Q01860 360 aaKnown RBP14.82□□□□□ -0.04
TCOF1-215ENST00000515516 ALCAMQ13740 583 aa14.82□□□□□ -0.04
TCOF1-215ENST00000515516 CYP4A22Q5TCH4 519 aa14.82□□□□□ -0.04
TCOF1-215ENST00000515516 ARMCX5Q6P1M9 558 aa14.82□□□□□ -0.04
TCOF1-215ENST00000515516 PARM1Q6UWI2 310 aa14.82□□□□□ -0.04
TCOF1-215ENST00000515516 ST13P5Q8NFI4 369 aaPredicted RBP14.82□□□□□ -0.04
TCOF1-215ENST00000515516 ING5Q8WYH8 240 aa14.82□□□□□ -0.04
TCOF1-215ENST00000515516 ZNF512Q96ME7 567 aaPredicted RBP14.82□□□□□ -0.04
TCOF1-215ENST00000515516 CORO1BQ9BR76 489 aa14.82□□□□□ -0.04
TCOF1-215ENST00000515516 PANK4Q9NVE7 773 aa14.82□□□□□ -0.04
TCOF1-215ENST00000515516 GDE1Q9NZC3 331 aa14.82□□□□□ -0.04
TCOF1-215ENST00000515516 TBC1D7Q9P0N9 293 aa14.82□□□□□ -0.04
TCOF1-215ENST00000515516 TFIP11Q9UBB9 837 aaKnown RBP14.82□□□□□ -0.04
TCOF1-215ENST00000515516 TIMM13Q9Y5L4 95 aaPredicted RBP14.82□□□□□ -0.04
TCOF1-215ENST00000515516 INSL5Q9Y5Q6 135 aa14.82□□□□□ -0.04
TCOF1-215ENST00000515516 STYXL1Q9Y6J8 313 aa14.82□□□□□ -0.04
TCOF1-215ENST00000515516 PLXNA3P51805 1871 aa14.81□□□□□ -0.04
TCOF1-215ENST00000515516 H0Y858 1186 aa14.81□□□□□ -0.04
TCOF1-215ENST00000515516 PPP6R2O75170 966 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms