RNA–Protein interactions for RNA: ENST00000515005.1

SMAD5-210, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 368 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-210ENST00000515005 ZMYM2Q9UBW7 1377 aa13.11□□□□□ -0.31
SMAD5-210ENST00000515005 I3L4J1 428 aa13.11□□□□□ -0.31
SMAD5-210ENST00000515005 SH2B2O14492 632 aaPredicted RBP13.11□□□□□ -0.31
SMAD5-210ENST00000515005 B4GALT5O43286 388 aa13.11□□□□□ -0.31
SMAD5-210ENST00000515005 PRC1O43663 620 aa13.11□□□□□ -0.31
SMAD5-210ENST00000515005 EDIL3O43854 480 aa13.11□□□□□ -0.31
SMAD5-210ENST00000515005 PRKCBP05771 671 aa13.11□□□□□ -0.31
SMAD5-210ENST00000515005 DGKEP52429 567 aa13.11□□□□□ -0.31
SMAD5-210ENST00000515005 ARPP19P56211 112 aa13.11□□□□□ -0.31
SMAD5-210ENST00000515005 CACNB1Q02641 598 aaPredicted RBP13.11□□□□□ -0.31
SMAD5-210ENST00000515005 NAB2Q15742 525 aa13.11□□□□□ -0.31
SMAD5-210ENST00000515005 AMHR2Q16671 573 aa13.11□□□□□ -0.31
SMAD5-210ENST00000515005 STXBP5Q5T5C0 1151 aa13.11□□□□□ -0.31
SMAD5-210ENST00000515005 SLC8B1Q6J4K2 584 aa13.11□□□□□ -0.31
SMAD5-210ENST00000515005 CASC1Q6TDU7 716 aa13.11□□□□□ -0.31
SMAD5-210ENST00000515005 ANKS3Q6ZW76 656 aa13.11□□□□□ -0.31
SMAD5-210ENST00000515005 HAUS6Q7Z4H7 955 aa13.11□□□□□ -0.31
SMAD5-210ENST00000515005 FERMT3Q86UX7 667 aa13.11□□□□□ -0.31
SMAD5-210ENST00000515005 ELMOD1Q8N336 334 aa13.11□□□□□ -0.31
SMAD5-210ENST00000515005 SLC7A3Q8WY07 619 aa13.11□□□□□ -0.31
SMAD5-210ENST00000515005 CHFRQ96EP1 664 aa13.11□□□□□ -0.31
SMAD5-210ENST00000515005 LNPKQ9C0E8 428 aa13.11□□□□□ -0.31
SMAD5-210ENST00000515005 GPR88Q9GZN0 384 aa13.11□□□□□ -0.31
SMAD5-210ENST00000515005 DHX33Q9H6R0 707 aaKnown RBP13.11□□□□□ -0.31
SMAD5-210ENST00000515005 FBRSL1Q9HCM7 1045 aaKnown RBP13.11□□□□□ -0.31
SMAD5-210ENST00000515005 ASAH2Q9NR71 780 aa13.11□□□□□ -0.31
SMAD5-210ENST00000515005 TMEM74BQ9NUR3 256 aa13.11□□□□□ -0.31
SMAD5-210ENST00000515005 RCAN3Q9UKA8 241 aa13.11□□□□□ -0.31
SMAD5-210ENST00000515005 PTPRQQ9UMZ3 2332 aa13.11□□□□□ -0.31
SMAD5-210ENST00000515005 A0A087WV48 116 aa13.1□□□□□ -0.31
SMAD5-210ENST00000515005 A0A1W2PRU2 124 aa13.1□□□□□ -0.31
SMAD5-210ENST00000515005 INO80B-WBP1J3KQ70 363 aa13.1□□□□□ -0.31
SMAD5-210ENST00000515005 THP07101 528 aa13.1□□□□□ -0.31
SMAD5-210ENST00000515005 PTENP60484 403 aa13.1□□□□□ -0.31
SMAD5-210ENST00000515005 NCBP1Q09161 790 aaKnown RBP13.1□□□□□ -0.31
SMAD5-210ENST00000515005 TWF1Q12792 350 aa13.1□□□□□ -0.31
SMAD5-210ENST00000515005 PCBP1Q15365 356 aaKnown RBP eCLIP13.1□□□□□ -0.31
SMAD5-210ENST00000515005 ITPRIPL2Q3MIP1 535 aa13.1□□□□□ -0.31
SMAD5-210ENST00000515005 USP39Q53GS9 565 aaKnown RBP13.1□□□□□ -0.31
SMAD5-210ENST00000515005 CD300LGQ6UXG3 332 aa13.1□□□□□ -0.31
SMAD5-210ENST00000515005 TMTC2Q8N394 836 aa13.1□□□□□ -0.31
SMAD5-210ENST00000515005 HDDC3Q8N4P3 179 aa13.1□□□□□ -0.31
SMAD5-210ENST00000515005 RDM1Q8NG50 284 aa13.1□□□□□ -0.31
SMAD5-210ENST00000515005 EXOC6Q8TAG9 804 aa13.1□□□□□ -0.31
SMAD5-210ENST00000515005 CAMK1GQ96NX5 476 aa13.1□□□□□ -0.31
SMAD5-210ENST00000515005 TPSD1Q9BZJ3 242 aa13.1□□□□□ -0.31
SMAD5-210ENST00000515005 SLC12A7Q9Y666 1083 aa13.1□□□□□ -0.31
SMAD5-210ENST00000515005 NUP210Q8TEM1 1887 aaPredicted RBP13.1□□□□□ -0.31
SMAD5-210ENST00000515005 MYO16Q9Y6X6 1858 aa13.1□□□□□ -0.31
SMAD5-210ENST00000515005 PTPRDP23468 1912 aa13.09□□□□□ -0.31
SMAD5-210ENST00000515005 TRIP11Q15643 1979 aa13.09□□□□□ -0.31
SMAD5-210ENST00000515005 COL6A6A6NMZ7 2263 aa13.09□□□□□ -0.31
SMAD5-210ENST00000515005 TRDMT1O14717 391 aaKnown RBP13.09□□□□□ -0.31
SMAD5-210ENST00000515005 PSMD10O75832 226 aa13.09□□□□□ -0.31
SMAD5-210ENST00000515005 B3GAT3O94766 335 aa13.09□□□□□ -0.31
SMAD5-210ENST00000515005 FTH1P19P0C7X4 201 aa13.09□□□□□ -0.31
SMAD5-210ENST00000515005 MBTD1Q05BQ5 628 aa13.09□□□□□ -0.31
SMAD5-210ENST00000515005 FUT2Q10981 343 aa13.09□□□□□ -0.31
SMAD5-210ENST00000515005 DMC1Q14565 340 aa13.09□□□□□ -0.31
SMAD5-210ENST00000515005 TRIP6Q15654 476 aaKnown RBP13.09□□□□□ -0.31
SMAD5-210ENST00000515005 SYT13Q7L8C5 426 aa13.09□□□□□ -0.31
SMAD5-210ENST00000515005 C11orf74Q86VG3 221 aa13.09□□□□□ -0.31
SMAD5-210ENST00000515005 MICU3Q86XE3 530 aa13.09□□□□□ -0.31
SMAD5-210ENST00000515005 LEMD2Q8NC56 503 aa13.09□□□□□ -0.31
SMAD5-210ENST00000515005 DAGLBQ8NCG7 672 aa13.09□□□□□ -0.31
SMAD5-210ENST00000515005 RPLP0P6Q8NHW5 317 aa13.09□□□□□ -0.31
SMAD5-210ENST00000515005 CEP170P1Q96L14 293 aa13.09□□□□□ -0.31
SMAD5-210ENST00000515005 GTPBP2Q9BX10 602 aaKnown RBP13.09□□□□□ -0.31
SMAD5-210ENST00000515005 DKK4Q9UBT3 224 aa13.09□□□□□ -0.31
SMAD5-210ENST00000515005 OTOL1A6NHN0 477 aaPredicted RBP13.08□□□□□ -0.32
SMAD5-210ENST00000515005 hCG_1984214I3L0E3 225 aa13.08□□□□□ -0.32
SMAD5-210ENST00000515005 DPYSL4O14531 572 aa13.08□□□□□ -0.32
SMAD5-210ENST00000515005 ASAP2O43150 1006 aa13.08□□□□□ -0.32
SMAD5-210ENST00000515005 CD59P13987 128 aa13.08□□□□□ -0.32
SMAD5-210ENST00000515005 BRCC3P46736 316 aa13.08□□□□□ -0.32
SMAD5-210ENST00000515005 PSMC5P62195 406 aa13.08□□□□□ -0.32
SMAD5-210ENST00000515005 CYP4F3Q08477 520 aa13.08□□□□□ -0.32
SMAD5-210ENST00000515005 SLC27A1Q6PCB7 646 aa13.08□□□□□ -0.32
SMAD5-210ENST00000515005 B3GNT9Q6UX72 402 aa13.08□□□□□ -0.32
SMAD5-210ENST00000515005 ARMCX6Q7L4S7 300 aa13.08□□□□□ -0.32
SMAD5-210ENST00000515005 ZNF713Q8N859 430 aaPredicted RBP13.08□□□□□ -0.32
SMAD5-210ENST00000515005 PIP4K2CQ8TBX8 421 aa13.08□□□□□ -0.32
SMAD5-210ENST00000515005 CCDC136Q96JN2 1154 aa13.08□□□□□ -0.32
SMAD5-210ENST00000515005 LRRC3Q9BY71 257 aa13.08□□□□□ -0.32
SMAD5-210ENST00000515005 CLMPQ9H6B4 373 aa13.08□□□□□ -0.32
SMAD5-210ENST00000515005 KIAA1549LQ6ZVL6 1849 aa13.08□□□□□ -0.32
SMAD5-210ENST00000515005 ARID2Q68CP9 1835 aa13.07□□□□□ -0.32
SMAD5-210ENST00000515005 A0A1B0GUA9 196 aa13.07□□□□□ -0.32
SMAD5-210ENST00000515005 TMEM189-UBE2V1I3L0A0 370 aa13.07□□□□□ -0.32
SMAD5-210ENST00000515005 PYCARD-AS1I3L0S3 204 aa13.07□□□□□ -0.32
SMAD5-210ENST00000515005 PTGER3P43115 390 aa13.07□□□□□ -0.32
SMAD5-210ENST00000515005 CLCNKBP51801 687 aa13.07□□□□□ -0.32
SMAD5-210ENST00000515005 ATXN3P54252 364 aaPredicted RBP13.07□□□□□ -0.32
SMAD5-210ENST00000515005 PLCB2Q00722 1185 aa13.07□□□□□ -0.32
SMAD5-210ENST00000515005 HNRNPDQ14103 355 aaKnown RBP13.07□□□□□ -0.32
SMAD5-210ENST00000515005 EMC2Q15006 297 aa13.07□□□□□ -0.32
SMAD5-210ENST00000515005 NAIF1Q69YI7 327 aaPredicted RBP13.07□□□□□ -0.32
SMAD5-210ENST00000515005 SLC23A3Q6PIS1 610 aa13.07□□□□□ -0.32
SMAD5-210ENST00000515005 SYT12Q8IV01 421 aa13.07□□□□□ -0.32
SMAD5-210ENST00000515005 SCUBE3Q8IX30 993 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms