RNA–Protein interactions for RNA: ENST00000514738.5

CDH6-205, Transcript of cadherin 6, humanhuman

TSL 1 (best) BASIC

Gene CDH6, Length 2,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6-205ENST00000514738 PLCH2O75038 1416 aa17.14■□□□□ 0.33
CDH6-205ENST00000514738 CARMIL2Q6F5E8 1435 aa17.14■□□□□ 0.33
CDH6-205ENST00000514738 USP32Q8NFA0 1604 aa17.13■□□□□ 0.33
CDH6-205ENST00000514738 CCDC22O60826 627 aa17.13■□□□□ 0.33
CDH6-205ENST00000514738 MAP3K6O95382 1288 aa17.13■□□□□ 0.33
CDH6-205ENST00000514738 PLEKHA8P1O95397 391 aa17.13■□□□□ 0.33
CDH6-205ENST00000514738 HADHAP40939 763 aa17.13■□□□□ 0.33
CDH6-205ENST00000514738 SMARCB1Q12824 385 aa17.13■□□□□ 0.33
CDH6-205ENST00000514738 KRT81Q14533 505 aa17.13■□□□□ 0.33
CDH6-205ENST00000514738 DSC3Q14574 896 aa17.13■□□□□ 0.33
CDH6-205ENST00000514738 SF3B3Q15393 1217 aaKnown RBP17.13■□□□□ 0.33
CDH6-205ENST00000514738 BTBD10Q9BSF8 475 aa17.13■□□□□ 0.33
CDH6-205ENST00000514738 NT5C3AQ9H0P0 336 aa17.13■□□□□ 0.33
CDH6-205ENST00000514738 STMN4Q9H169 189 aaPredicted RBP17.13■□□□□ 0.33
CDH6-205ENST00000514738 RIC8AQ9NPQ8 531 aa17.13■□□□□ 0.33
CDH6-205ENST00000514738 SEC31BQ9NQW1 1179 aa17.13■□□□□ 0.33
CDH6-205ENST00000514738 SCAF8Q9UPN6 1271 aaKnown RBP17.13■□□□□ 0.33
CDH6-205ENST00000514738 PCDHA13Q9Y5I0 950 aa17.13■□□□□ 0.33
CDH6-205ENST00000514738 SCINQ9Y6U3 715 aa17.13■□□□□ 0.33
CDH6-205ENST00000514738 INO80B-WBP1J3KQ70 363 aa17.13■□□□□ 0.33
CDH6-205ENST00000514738 BUD23O43709 281 aaKnown RBP17.13■□□□□ 0.33
CDH6-205ENST00000514738 TLR2O60603 784 aa17.13■□□□□ 0.33
CDH6-205ENST00000514738 RNGTTO60942 597 aaKnown RBP17.13■□□□□ 0.33
CDH6-205ENST00000514738 BAG2O95816 211 aa17.13■□□□□ 0.33
CDH6-205ENST00000514738 CALM1P0DP23 149 aa17.13■□□□□ 0.33
CDH6-205ENST00000514738 CALM2P0DP24 149 aa17.13■□□□□ 0.33
CDH6-205ENST00000514738 CALM3P0DP25 149 aa17.13■□□□□ 0.33
CDH6-205ENST00000514738 AMPD1P23109 780 aa17.13■□□□□ 0.33
CDH6-205ENST00000514738 DNA2P51530 1060 aa17.13■□□□□ 0.33
CDH6-205ENST00000514738 DNAJC3Q13217 504 aa17.13■□□□□ 0.33
CDH6-205ENST00000514738 RWDD4Q6NW29 188 aaKnown RBP17.13■□□□□ 0.33
CDH6-205ENST00000514738 RAPH1Q70E73 1250 aa17.13■□□□□ 0.33
CDH6-205ENST00000514738 FBXL16Q8N461 479 aa17.13■□□□□ 0.33
CDH6-205ENST00000514738 USP38Q8NB14 1042 aa17.13■□□□□ 0.33
CDH6-205ENST00000514738 PSD4Q8NDX1 1056 aa17.13■□□□□ 0.33
CDH6-205ENST00000514738 TAMM41Q96BW9 452 aa17.13■□□□□ 0.33
CDH6-205ENST00000514738 TRIM55Q9BYV6 548 aa17.13■□□□□ 0.33
CDH6-205ENST00000514738 TXLNGYQ9BZA5 131 aa17.13■□□□□ 0.33
CDH6-205ENST00000514738 SLC38A10Q9HBR0 1119 aa17.13■□□□□ 0.33
CDH6-205ENST00000514738 TMEM59LQ9UK28 342 aa17.13■□□□□ 0.33
CDH6-205ENST00000514738 C2orf81A6NN90 581 aa17.12■□□□□ 0.33
CDH6-205ENST00000514738 CCRL2O00421 344 aa17.12■□□□□ 0.33
CDH6-205ENST00000514738 SH2B2O14492 632 aaPredicted RBP17.12■□□□□ 0.33
CDH6-205ENST00000514738 CAPN1P07384 714 aa17.12■□□□□ 0.33
CDH6-205ENST00000514738 TBXAS1P24557 533 aaPredicted RBP17.12■□□□□ 0.33
CDH6-205ENST00000514738 EPS15P42566 896 aa17.12■□□□□ 0.33
CDH6-205ENST00000514738 GNG2P59768 71 aa17.12■□□□□ 0.33
CDH6-205ENST00000514738 EFTUD2Q15029 972 aaKnown RBP eCLIP17.12■□□□□ 0.33
CDH6-205ENST00000514738 SFT2D3Q587I9 215 aa17.12■□□□□ 0.33
CDH6-205ENST00000514738 SPDYAQ5MJ70 313 aa17.12■□□□□ 0.33
CDH6-205ENST00000514738 METTL3Q86U44 580 aaKnown RBP17.12■□□□□ 0.33
CDH6-205ENST00000514738 MCUR1Q96AQ8 359 aa17.12■□□□□ 0.33
CDH6-205ENST00000514738 EPB41L4BQ9H329 900 aa17.12■□□□□ 0.33
CDH6-205ENST00000514738 MLXIPLQ9NP71 852 aa17.12■□□□□ 0.33
CDH6-205ENST00000514738 SERTAD1Q9UHV2 236 aa17.12■□□□□ 0.33
CDH6-205ENST00000514738 PCDHA12Q9UN75 941 aa17.12■□□□□ 0.33
CDH6-205ENST00000514738 DNM3Q9UQ16 869 aa17.12■□□□□ 0.33
CDH6-205ENST00000514738 GOLGA8QA0A0J9YX86 632 aa17.12■□□□□ 0.33
CDH6-205ENST00000514738 GOLGA8OA6NCC3 632 aa17.12■□□□□ 0.33
CDH6-205ENST00000514738 GOLGA8NF8WBI6 632 aa17.12■□□□□ 0.33
CDH6-205ENST00000514738 GOLGA8RI6L899 631 aa17.12■□□□□ 0.33
CDH6-205ENST00000514738 GSTM1P09488 218 aa17.12■□□□□ 0.33
CDH6-205ENST00000514738 ARL1P40616 181 aaPredicted RBP17.12■□□□□ 0.33
CDH6-205ENST00000514738 KLHL30Q0D2K2 578 aa17.12■□□□□ 0.33
CDH6-205ENST00000514738 TAF1BQ53T94 588 aaPredicted RBP17.12■□□□□ 0.33
CDH6-205ENST00000514738 ALKBH2Q6NS38 261 aa17.12■□□□□ 0.33
CDH6-205ENST00000514738 AADATQ8N5Z0 425 aa17.12■□□□□ 0.33
CDH6-205ENST00000514738 DDI1Q8WTU0 396 aa17.12■□□□□ 0.33
CDH6-205ENST00000514738 CYTH2Q99418 400 aa17.12■□□□□ 0.33
CDH6-205ENST00000514738 C17orf80Q9BSJ5 609 aa17.12■□□□□ 0.33
CDH6-205ENST00000514738 PITPNM3Q9BZ71 974 aa17.12■□□□□ 0.33
CDH6-205ENST00000514738 TP63Q9H3D4 680 aaPredicted RBP17.12■□□□□ 0.33
CDH6-205ENST00000514738 KCTD5Q9NXV2 234 aa17.12■□□□□ 0.33
CDH6-205ENST00000514738 DNAJB4Q9UDY4 337 aa17.12■□□□□ 0.33
CDH6-205ENST00000514738 ACAD8Q9UKU7 415 aa17.12■□□□□ 0.33
CDH6-205ENST00000514738 TDRD9Q8NDG6 1382 aaKnown RBP17.12■□□□□ 0.33
CDH6-205ENST00000514738 PVALEFA0A1B0GWK0 134 aa17.11■□□□□ 0.33
CDH6-205ENST00000514738 RSPH10B2B2RC85 870 aa17.11■□□□□ 0.33
CDH6-205ENST00000514738 F6X3S4 739 aa17.11■□□□□ 0.33
CDH6-205ENST00000514738 RSPH10BP0C881 870 aa17.11■□□□□ 0.33
CDH6-205ENST00000514738 CDK9P50750 372 aaKnown RBP17.11■□□□□ 0.33
CDH6-205ENST00000514738 SPAG1Q07617 926 aa17.11■□□□□ 0.33
CDH6-205ENST00000514738 PTPAQ15257 358 aa17.11■□□□□ 0.33
CDH6-205ENST00000514738 TTC39AQ5SRH9 613 aa17.11■□□□□ 0.33
CDH6-205ENST00000514738 TAS2R42Q7RTR8 314 aa17.11■□□□□ 0.33
CDH6-205ENST00000514738 SCYL3Q8IZE3 742 aa17.11■□□□□ 0.33
CDH6-205ENST00000514738 SPATA5Q8NB90 893 aa17.11■□□□□ 0.33
CDH6-205ENST00000514738 ESR2Q92731 530 aa17.11■□□□□ 0.33
CDH6-205ENST00000514738 OSBP2Q969R2 916 aa17.11■□□□□ 0.33
CDH6-205ENST00000514738 NXPE3Q969Y0 559 aa17.11■□□□□ 0.33
CDH6-205ENST00000514738 SP140LQ9H930 580 aa17.11■□□□□ 0.33
CDH6-205ENST00000514738 S100A14Q9HCY8 104 aa17.11■□□□□ 0.33
CDH6-205ENST00000514738 TMEM120BA0PK00 339 aa17.11■□□□□ 0.33
CDH6-205ENST00000514738 TXNDC9O14530 226 aa17.11■□□□□ 0.33
CDH6-205ENST00000514738 HDAC3O15379 428 aa17.11■□□□□ 0.33
CDH6-205ENST00000514738 GPC4O75487 556 aa17.11■□□□□ 0.33
CDH6-205ENST00000514738 PRLP01236 227 aa17.11■□□□□ 0.33
CDH6-205ENST00000514738 AP2B1P63010 937 aa17.11■□□□□ 0.33
CDH6-205ENST00000514738 ANKRD53Q8N9V6 530 aa17.11■□□□□ 0.33
CDH6-205ENST00000514738 SPATA20Q8TB22 786 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms