RNA–Protein interactions for RNA: ENST00000514508.1

COPB2-212, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 4

Gene COPB2, Length 635 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-212ENST00000514508 SCN1AP35498 2009 aa13.43□□□□□ -0.26
COPB2-212ENST00000514508 CYP2J2P51589 502 aa13.43□□□□□ -0.26
COPB2-212ENST00000514508 CLCN4P51793 760 aa13.43□□□□□ -0.26
COPB2-212ENST00000514508 PLXNA3P51805 1871 aa13.43□□□□□ -0.26
COPB2-212ENST00000514508 RBM10P98175 930 aaKnown RBP13.43□□□□□ -0.26
COPB2-212ENST00000514508 PSMD5Q16401 504 aa13.43□□□□□ -0.26
COPB2-212ENST00000514508 ANKRD54Q6NXT1 300 aa13.43□□□□□ -0.26
COPB2-212ENST00000514508 LLGL2Q6P1M3 1020 aa13.43□□□□□ -0.26
COPB2-212ENST00000514508 CLEC17AQ6ZS10 378 aa13.43□□□□□ -0.26
COPB2-212ENST00000514508 CBWD2Q8IUF1 395 aa13.43□□□□□ -0.26
COPB2-212ENST00000514508 EFCAB13Q8IY85 973 aa13.43□□□□□ -0.26
COPB2-212ENST00000514508 GUF1Q8N442 669 aaKnown RBP13.43□□□□□ -0.26
COPB2-212ENST00000514508 LNX1Q8TBB1 728 aaPredicted RBP13.43□□□□□ -0.26
COPB2-212ENST00000514508 CACTINQ8WUQ7 758 aaKnown RBP13.43□□□□□ -0.26
COPB2-212ENST00000514508 TMEM174Q8WUU8 243 aa13.43□□□□□ -0.26
COPB2-212ENST00000514508 SMARCE1Q969G3 411 aa13.43□□□□□ -0.26
COPB2-212ENST00000514508 SUSD3Q96L08 255 aa13.43□□□□□ -0.26
COPB2-212ENST00000514508 GTPBP4Q9BZE4 634 aaKnown RBP13.43□□□□□ -0.26
COPB2-212ENST00000514508 KCTD10Q9H3F6 313 aa13.43□□□□□ -0.26
COPB2-212ENST00000514508 DZANK1Q9NVP4 752 aa13.43□□□□□ -0.26
COPB2-212ENST00000514508 DPP3Q9NY33 737 aa13.43□□□□□ -0.26
COPB2-212ENST00000514508 DPP7Q9UHL4 492 aa13.43□□□□□ -0.26
COPB2-212ENST00000514508 ANO9A1A5B4 782 aa13.42□□□□□ -0.26
COPB2-212ENST00000514508 GRXCR2A6NFK2 248 aa13.42□□□□□ -0.26
COPB2-212ENST00000514508 PIRO00625 290 aa13.42□□□□□ -0.26
COPB2-212ENST00000514508 PRPF40AO75400 957 aaKnown RBP13.42□□□□□ -0.26
COPB2-212ENST00000514508 TKTP29401 623 aaKnown RBP13.42□□□□□ -0.26
COPB2-212ENST00000514508 AARSP49588 968 aaKnown RBP eCLIP13.42□□□□□ -0.26
COPB2-212ENST00000514508 GUCY2FP51841 1108 aa13.42□□□□□ -0.26
COPB2-212ENST00000514508 TFAMQ00059 246 aaKnown RBP13.42□□□□□ -0.26
COPB2-212ENST00000514508 SMAD4Q13485 552 aaKnown RBP13.42□□□□□ -0.26
COPB2-212ENST00000514508 MYBPC2Q14324 1141 aa13.42□□□□□ -0.26
COPB2-212ENST00000514508 SNRNP35Q16560 246 aaKnown RBP13.42□□□□□ -0.26
COPB2-212ENST00000514508 C9orf57Q5W0N0 161 aa13.42□□□□□ -0.26
COPB2-212ENST00000514508 PTCRAQ6ISU1 281 aaPredicted RBP13.42□□□□□ -0.26
COPB2-212ENST00000514508 ELMSAN1Q6PJG2 1045 aa13.42□□□□□ -0.26
COPB2-212ENST00000514508 PRSS55Q6UWB4 352 aaPredicted RBP13.42□□□□□ -0.26
COPB2-212ENST00000514508 ANKS3Q6ZW76 656 aa13.42□□□□□ -0.26
COPB2-212ENST00000514508 SLC9A9Q8IVB4 645 aa13.42□□□□□ -0.26
COPB2-212ENST00000514508 SPATA20Q8TB22 786 aa13.42□□□□□ -0.26
COPB2-212ENST00000514508 PDE11AQ9HCR9 933 aa13.42□□□□□ -0.26
COPB2-212ENST00000514508 TRAF3IP3Q9Y228 551 aa13.42□□□□□ -0.26
COPB2-212ENST00000514508 PCDHA5Q9Y5H7 936 aa13.42□□□□□ -0.26
COPB2-212ENST00000514508 M0QZQ0 153 aa13.41□□□□□ -0.26
COPB2-212ENST00000514508 TULP1O00294 542 aaPredicted RBP13.41□□□□□ -0.26
COPB2-212ENST00000514508 MBTPS2O43462 519 aa13.41□□□□□ -0.26
COPB2-212ENST00000514508 CALUO43852 315 aaPredicted RBP13.41□□□□□ -0.26
COPB2-212ENST00000514508 EXOC3O60645 756 aa13.41□□□□□ -0.26
COPB2-212ENST00000514508 GLUD1P00367 558 aa13.41□□□□□ -0.26
COPB2-212ENST00000514508 EPCAMP16422 314 aa13.41□□□□□ -0.26
COPB2-212ENST00000514508 WNT7BP56706 349 aa13.41□□□□□ -0.26
COPB2-212ENST00000514508 LILRA4P59901 499 aa13.41□□□□□ -0.26
COPB2-212ENST00000514508 CLUL1Q15846 466 aa13.41□□□□□ -0.26
COPB2-212ENST00000514508 VARS2Q5ST30 1063 aaKnown RBP13.41□□□□□ -0.26
COPB2-212ENST00000514508 ZNF658Q5TYW1 1059 aaPredicted RBP13.41□□□□□ -0.26
COPB2-212ENST00000514508 TMEM130Q8N3G9 435 aa13.41□□□□□ -0.26
COPB2-212ENST00000514508 RDH13Q8NBN7 331 aa13.41□□□□□ -0.26
COPB2-212ENST00000514508 SMRP1Q8NCR6 262 aa13.41□□□□□ -0.26
COPB2-212ENST00000514508 APPL2Q8NEU8 664 aa13.41□□□□□ -0.26
COPB2-212ENST00000514508 HDAC7Q8WUI4 952 aa13.41□□□□□ -0.26
COPB2-212ENST00000514508 CLSTN3Q9BQT9 956 aa13.41□□□□□ -0.26
COPB2-212ENST00000514508 DMAC2Q9NW81 257 aa13.41□□□□□ -0.26
COPB2-212ENST00000514508 MTRRQ9UBK8 725 aa13.41□□□□□ -0.26
COPB2-212ENST00000514508 PCDHB8Q9UN66 801 aa13.41□□□□□ -0.26
COPB2-212ENST00000514508 BACE2Q9Y5Z0 518 aa13.41□□□□□ -0.26
COPB2-212ENST00000514508 UNC80Q8N2C7 3258 aa13.4□□□□□ -0.26
COPB2-212ENST00000514508 ARHGEF37A1IGU5 675 aa13.4□□□□□ -0.26
COPB2-212ENST00000514508 H7C4K7 107 aa13.4□□□□□ -0.26
COPB2-212ENST00000514508 PPEF2O14830 753 aa13.4□□□□□ -0.26
COPB2-212ENST00000514508 NR3C1P04150 777 aa13.4□□□□□ -0.26
COPB2-212ENST00000514508 TMEM191BP0C7N4 346 aa13.4□□□□□ -0.26
COPB2-212ENST00000514508 IL9P15248 144 aa13.4□□□□□ -0.26
COPB2-212ENST00000514508 RPL17P18621 184 aaKnown RBP13.4□□□□□ -0.26
COPB2-212ENST00000514508 PNPLA4P41247 253 aa13.4□□□□□ -0.26
COPB2-212ENST00000514508 TAF6P49848 677 aa13.4□□□□□ -0.26
COPB2-212ENST00000514508 CYP24A1Q07973 514 aa13.4□□□□□ -0.26
COPB2-212ENST00000514508 MRPL58Q14197 206 aaKnown RBP13.4□□□□□ -0.26
COPB2-212ENST00000514508 PSMD6Q15008 389 aa13.4□□□□□ -0.26
COPB2-212ENST00000514508 NFIL3Q16649 462 aa13.4□□□□□ -0.26
COPB2-212ENST00000514508 COBLL1Q53SF7 1204 aa13.4□□□□□ -0.26
COPB2-212ENST00000514508 SYCE2Q6PIF2 218 aa13.4□□□□□ -0.26
COPB2-212ENST00000514508 DSTYKQ6XUX3 929 aa13.4□□□□□ -0.26
COPB2-212ENST00000514508 PALB2Q86YC2 1186 aa13.4□□□□□ -0.26
COPB2-212ENST00000514508 WDR49Q8IV35 697 aa13.4□□□□□ -0.26
COPB2-212ENST00000514508 GLYCTKQ8IVS8 523 aa13.4□□□□□ -0.26
COPB2-212ENST00000514508 ANKRD36BP1Q96IX9 119 aa13.4□□□□□ -0.26
COPB2-212ENST00000514508 MFSD14AQ96MC6 490 aa13.4□□□□□ -0.26
COPB2-212ENST00000514508 ZNF560Q96MR9 790 aa13.4□□□□□ -0.26
COPB2-212ENST00000514508 GBP4Q96PP9 640 aa13.4□□□□□ -0.26
COPB2-212ENST00000514508 FNBP1Q96RU3 617 aa13.4□□□□□ -0.26
COPB2-212ENST00000514508 INTS13Q9NVM9 706 aa13.4□□□□□ -0.26
COPB2-212ENST00000514508 MAPK8IP1Q9UQF2 711 aa13.4□□□□□ -0.26
COPB2-212ENST00000514508 SPDYE4A6NLX3 237 aa13.39□□□□□ -0.27
COPB2-212ENST00000514508 TGM5O43548 720 aa13.39□□□□□ -0.27
COPB2-212ENST00000514508 TNNC2P02585 160 aa13.39□□□□□ -0.27
COPB2-212ENST00000514508 TNNI1P19237 187 aa13.39□□□□□ -0.27
COPB2-212ENST00000514508 RPL13P26373 211 aaKnown RBP13.39□□□□□ -0.27
COPB2-212ENST00000514508 ITIH3Q06033 890 aa13.39□□□□□ -0.27
COPB2-212ENST00000514508 RAB33AQ14088 237 aa13.39□□□□□ -0.27
COPB2-212ENST00000514508 SMAD2Q15796 467 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms