RNA–Protein interactions for RNA: ENST00000514335.1

NIPBL-208, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-208ENST00000514335 PPP2R5DQ14738 602 aa7.66□□□□□ -1.18
NIPBL-208ENST00000514335 EZH2Q15910 746 aaKnown RBP7.66□□□□□ -1.18
NIPBL-208ENST00000514335 RGS9BPQ6ZS82 235 aa7.66□□□□□ -1.18
NIPBL-208ENST00000514335 PLEKHM3Q6ZWE6 761 aa7.66□□□□□ -1.18
NIPBL-208ENST00000514335 ZNF365Q70YC5 407 aa7.66□□□□□ -1.18
NIPBL-208ENST00000514335 SEPT12Q8IYM1 358 aa7.66□□□□□ -1.18
NIPBL-208ENST00000514335 LPPQ93052 612 aa7.66□□□□□ -1.18
NIPBL-208ENST00000514335 WACQ9BTA9 647 aa7.66□□□□□ -1.18
NIPBL-208ENST00000514335 NUSAP1Q9BXS6 441 aaKnown RBP7.66□□□□□ -1.18
NIPBL-208ENST00000514335 CRISPLD2Q9H0B8 497 aa7.66□□□□□ -1.18
NIPBL-208ENST00000514335 NCOR1P1Q9H4R4 102 aa7.66□□□□□ -1.18
NIPBL-208ENST00000514335 GORASP2Q9H8Y8 452 aa7.66□□□□□ -1.18
NIPBL-208ENST00000514335 SPON1Q9HCB6 807 aa7.66□□□□□ -1.18
NIPBL-208ENST00000514335 RPRD1BQ9NQG5 326 aaKnown RBP7.66□□□□□ -1.18
NIPBL-208ENST00000514335 A0A1B0GWJ7 208 aa7.65□□□□□ -1.18
NIPBL-208ENST00000514335 GRIN3BO60391 1043 aa7.65□□□□□ -1.18
NIPBL-208ENST00000514335 NDUFS6O75380 124 aaKnown RBP7.65□□□□□ -1.18
NIPBL-208ENST00000514335 CLN5O75503 358 aa7.65□□□□□ -1.18
NIPBL-208ENST00000514335 EDN3P14138 238 aa7.65□□□□□ -1.18
NIPBL-208ENST00000514335 ATF6P18850 670 aa7.65□□□□□ -1.18
NIPBL-208ENST00000514335 TFEBP19484 476 aa7.65□□□□□ -1.18
NIPBL-208ENST00000514335 ACAT1P24752 427 aaKnown RBP7.65□□□□□ -1.18
NIPBL-208ENST00000514335 GSK3AP49840 483 aa7.65□□□□□ -1.18
NIPBL-208ENST00000514335 COPB1P53618 953 aaKnown RBP7.65□□□□□ -1.18
NIPBL-208ENST00000514335 PRKG2Q13237 762 aa7.65□□□□□ -1.18
NIPBL-208ENST00000514335 PDIA6Q15084 440 aa7.65□□□□□ -1.18
NIPBL-208ENST00000514335 INTS11Q5TA45 600 aaKnown RBP7.65□□□□□ -1.18
NIPBL-208ENST00000514335 KLC3Q6P597 504 aa7.65□□□□□ -1.18
NIPBL-208ENST00000514335 APLFQ8IW19 511 aaPredicted RBP7.65□□□□□ -1.18
NIPBL-208ENST00000514335 SLC4A11Q8NBS3 891 aa7.65□□□□□ -1.18
NIPBL-208ENST00000514335 URGCPQ8TCY9 931 aa7.65□□□□□ -1.18
NIPBL-208ENST00000514335 BAP1Q92560 729 aa7.65□□□□□ -1.18
NIPBL-208ENST00000514335 GRAMD1AQ96CP6 724 aa7.65□□□□□ -1.18
NIPBL-208ENST00000514335 HEPHQ9BQS7 1158 aa7.65□□□□□ -1.18
NIPBL-208ENST00000514335 DDX23Q9BUQ8 820 aaKnown RBP7.65□□□□□ -1.18
NIPBL-208ENST00000514335 STK33Q9BYT3 514 aa7.65□□□□□ -1.18
NIPBL-208ENST00000514335 ASPSCR1Q9BZE9 553 aa7.65□□□□□ -1.18
NIPBL-208ENST00000514335 OR6C74A6NCV1 312 aa7.65□□□□□ -1.18
NIPBL-208ENST00000514335 TK2O00142 265 aa7.65□□□□□ -1.18
NIPBL-208ENST00000514335 KPNA5O15131 536 aa7.65□□□□□ -1.18
NIPBL-208ENST00000514335 GOSR1O95249 250 aa7.65□□□□□ -1.18
NIPBL-208ENST00000514335 PRLP01236 227 aa7.65□□□□□ -1.18
NIPBL-208ENST00000514335 P4HA1P13674 534 aa7.65□□□□□ -1.18
NIPBL-208ENST00000514335 TMED10P49755 219 aaKnown RBP7.65□□□□□ -1.18
NIPBL-208ENST00000514335 HSD17B4P51659 736 aa7.65□□□□□ -1.18
NIPBL-208ENST00000514335 NLRP11P59045 1033 aaKnown RBP7.65□□□□□ -1.18
NIPBL-208ENST00000514335 SPCS2Q15005 226 aa7.65□□□□□ -1.18
NIPBL-208ENST00000514335 HERC3Q15034 1050 aa7.65□□□□□ -1.18
NIPBL-208ENST00000514335 UBE3CQ15386 1083 aa7.65□□□□□ -1.18
NIPBL-208ENST00000514335 KRT26Q7Z3Y9 468 aa7.65□□□□□ -1.18
NIPBL-208ENST00000514335 KSR1Q8IVT5 923 aa7.65□□□□□ -1.18
NIPBL-208ENST00000514335 RHOT2Q8IXI1 618 aa7.65□□□□□ -1.18
NIPBL-208ENST00000514335 FLAD1Q8NFF5 587 aa7.65□□□□□ -1.18
NIPBL-208ENST00000514335 SLC9A6Q92581 669 aa7.65□□□□□ -1.18
NIPBL-208ENST00000514335 OTUD5Q96G74 571 aa7.65□□□□□ -1.18
NIPBL-208ENST00000514335 CDCA7LQ96GN5 454 aa7.65□□□□□ -1.18
NIPBL-208ENST00000514335 ASB16Q96NS5 453 aa7.65□□□□□ -1.18
NIPBL-208ENST00000514335 HAUS8Q9BT25 410 aa7.65□□□□□ -1.18
NIPBL-208ENST00000514335 AGXT2Q9BYV1 514 aa7.65□□□□□ -1.18
NIPBL-208ENST00000514335 FHDC1Q9C0D6 1143 aaPredicted RBP7.65□□□□□ -1.18
NIPBL-208ENST00000514335 HSFX1Q9UBD0 423 aa7.65□□□□□ -1.18
NIPBL-208ENST00000514335 SNX6Q9UNH7 406 aa7.65□□□□□ -1.18
NIPBL-208ENST00000514335 SNX9Q9Y5X1 595 aa7.65□□□□□ -1.18
NIPBL-208ENST00000514335 GPC6Q9Y625 555 aaPredicted RBP7.65□□□□□ -1.18
NIPBL-208ENST00000514335 BTAF1O14981 1849 aa7.65□□□□□ -1.19
NIPBL-208ENST00000514335 ZNF804BA4D1E1 1349 aa7.65□□□□□ -1.19
NIPBL-208ENST00000514335 UBN2Q6ZU65 1347 aa7.65□□□□□ -1.19
NIPBL-208ENST00000514335 ATXN2Q99700 1313 aaKnown RBP7.65□□□□□ -1.19
NIPBL-208ENST00000514335 A0A0U1RQJ8 604 aa7.65□□□□□ -1.19
NIPBL-208ENST00000514335 IQANK1A0A1B0GTG1 560 aa7.65□□□□□ -1.19
NIPBL-208ENST00000514335 XPO1O14980 1071 aaKnown RBP7.65□□□□□ -1.19
NIPBL-208ENST00000514335 TSC22D2O75157 780 aa7.65□□□□□ -1.19
NIPBL-208ENST00000514335 OLR1P78380 273 aa7.65□□□□□ -1.19
NIPBL-208ENST00000514335 MPP1Q00013 466 aa7.65□□□□□ -1.19
NIPBL-208ENST00000514335 MLC1Q15049 377 aa7.65□□□□□ -1.19
NIPBL-208ENST00000514335 ERFEQ4G0M1 354 aa7.65□□□□□ -1.19
NIPBL-208ENST00000514335 FSCBQ5H9T9 825 aa7.65□□□□□ -1.19
NIPBL-208ENST00000514335 PPP1R26Q5T8A7 1209 aaPredicted RBP7.65□□□□□ -1.19
NIPBL-208ENST00000514335 DHX32Q7L7V1 743 aaKnown RBP7.65□□□□□ -1.19
NIPBL-208ENST00000514335 KIAA0907Q7Z7F0 614 aaPredicted RBP7.65□□□□□ -1.19
NIPBL-208ENST00000514335 PHLDB2Q86SQ0 1253 aa7.65□□□□□ -1.19
NIPBL-208ENST00000514335 SESTD1Q86VW0 696 aa7.65□□□□□ -1.19
NIPBL-208ENST00000514335 PLA2G4DQ86XP0 818 aa7.65□□□□□ -1.19
NIPBL-208ENST00000514335 SYCE1Q8N0S2 351 aa7.65□□□□□ -1.19
NIPBL-208ENST00000514335 CNBD1Q8NA66 436 aa7.65□□□□□ -1.19
NIPBL-208ENST00000514335 ZBTB44Q8NCP5 570 aa7.65□□□□□ -1.19
NIPBL-208ENST00000514335 CHST13Q8NET6 341 aa7.65□□□□□ -1.19
NIPBL-208ENST00000514335 LINS1Q8NG48 757 aa7.65□□□□□ -1.19
NIPBL-208ENST00000514335 POF1BQ8WVV4 589 aa7.65□□□□□ -1.19
NIPBL-208ENST00000514335 SEPT1Q8WYJ6 367 aa7.65□□□□□ -1.19
NIPBL-208ENST00000514335 DACT3Q96B18 629 aaPredicted RBP7.65□□□□□ -1.19
NIPBL-208ENST00000514335 RMDN1Q96DB5 314 aa7.65□□□□□ -1.19
NIPBL-208ENST00000514335 TNIP3Q96KP6 325 aa7.65□□□□□ -1.19
NIPBL-208ENST00000514335 MPHOSPH9Q99550 1183 aa7.65□□□□□ -1.19
NIPBL-208ENST00000514335 SGIP1Q9BQI5 828 aa7.65□□□□□ -1.19
NIPBL-208ENST00000514335 CARD6Q9BX69 1037 aa7.65□□□□□ -1.19
NIPBL-208ENST00000514335 HEMGNQ9BXL5 484 aa7.65□□□□□ -1.19
NIPBL-208ENST00000514335 CYP26B1Q9NR63 512 aa7.65□□□□□ -1.19
NIPBL-208ENST00000514335 ORC3Q9UBD5 711 aaPredicted RBP7.65□□□□□ -1.19
NIPBL-208ENST00000514335 FETUBQ9UGM5 382 aa7.65□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms