RNA–Protein interactions for RNA: ENST00000514219.1

TRIM41-206, Transcript of tripartite motif containing 41, humanhuman

TSL 5

Gene TRIM41, Length 459 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-206ENST00000514219 TMC6Q7Z403 805 aa17.18■□□□□ 0.34
TRIM41-206ENST00000514219 ECHDC2Q86YB7 292 aa17.18■□□□□ 0.34
TRIM41-206ENST00000514219 NPAS4Q8IUM7 802 aa17.18■□□□□ 0.34
TRIM41-206ENST00000514219 DBF4BQ8NFT6 615 aa17.18■□□□□ 0.34
TRIM41-206ENST00000514219 NT5C1BQ96P26 610 aa17.18■□□□□ 0.34
TRIM41-206ENST00000514219 TMX1Q9H3N1 280 aa17.18■□□□□ 0.34
TRIM41-206ENST00000514219 ZNHIT6Q9NWK9 470 aaKnown RBP17.18■□□□□ 0.34
TRIM41-206ENST00000514219 RAB20Q9NX57 234 aa17.18■□□□□ 0.34
TRIM41-206ENST00000514219 UMODL1Q5DID0 1318 aa17.18■□□□□ 0.34
TRIM41-206ENST00000514219 FAM86C2PA6NEL3 165 aa17.17■□□□□ 0.34
TRIM41-206ENST00000514219 C9IYK1 514 aa17.17■□□□□ 0.34
TRIM41-206ENST00000514219 INPPL1O15357 1258 aa17.17■□□□□ 0.34
TRIM41-206ENST00000514219 TLL1O43897 1013 aa17.17■□□□□ 0.34
TRIM41-206ENST00000514219 THP07101 528 aa17.17■□□□□ 0.34
TRIM41-206ENST00000514219 MYOGP15173 224 aa17.17■□□□□ 0.34
TRIM41-206ENST00000514219 KCNJ6P48051 423 aa17.17■□□□□ 0.34
TRIM41-206ENST00000514219 FAM189BP81408 668 aa17.17■□□□□ 0.34
TRIM41-206ENST00000514219 RBP5P82980 135 aa17.17■□□□□ 0.34
TRIM41-206ENST00000514219 XKR4Q5GH76 650 aa17.17■□□□□ 0.34
TRIM41-206ENST00000514219 TRIM65Q6PJ69 517 aa17.17■□□□□ 0.34
TRIM41-206ENST00000514219 CEP120Q8N960 986 aa17.17■□□□□ 0.34
TRIM41-206ENST00000514219 SMG8Q8ND04 991 aaKnown RBP17.17■□□□□ 0.34
TRIM41-206ENST00000514219 KHSRPQ92945 711 aaKnown RBP eCLIP17.17■□□□□ 0.34
TRIM41-206ENST00000514219 DDX27Q96GQ7 796 aaKnown RBP17.17■□□□□ 0.34
TRIM41-206ENST00000514219 PDLIM2Q96JY6 352 aa17.17■□□□□ 0.34
TRIM41-206ENST00000514219 APOL6Q9BWW8 343 aa17.17■□□□□ 0.34
TRIM41-206ENST00000514219 TMEM117Q9H0C3 514 aa17.17■□□□□ 0.34
TRIM41-206ENST00000514219 CEP72Q9P209 647 aa17.17■□□□□ 0.34
TRIM41-206ENST00000514219 APEX2Q9UBZ4 518 aa17.17■□□□□ 0.34
TRIM41-206ENST00000514219 LUC7L2Q9Y383 392 aaKnown RBP17.17■□□□□ 0.34
TRIM41-206ENST00000514219 MTCH2Q9Y6C9 303 aa17.17■□□□□ 0.34
TRIM41-206ENST00000514219 POU3F3P20264 500 aaPredicted RBP17.16■□□□□ 0.34
TRIM41-206ENST00000514219 RPL9P32969 192 aaKnown RBP17.16■□□□□ 0.34
TRIM41-206ENST00000514219 PBX1P40424 430 aa17.16■□□□□ 0.34
TRIM41-206ENST00000514219 MFAP3P55082 362 aa17.16■□□□□ 0.34
TRIM41-206ENST00000514219 DLG4P78352 724 aa17.16■□□□□ 0.34
TRIM41-206ENST00000514219 PPP3CAQ08209 521 aa17.16■□□□□ 0.34
TRIM41-206ENST00000514219 NCOA4Q13772 614 aa17.16■□□□□ 0.34
TRIM41-206ENST00000514219 ZBTB41Q5SVQ8 909 aa17.16■□□□□ 0.34
TRIM41-206ENST00000514219 JADE1Q6IE81 842 aa17.16■□□□□ 0.34
TRIM41-206ENST00000514219 ALKAL1Q6UXT8 129 aa17.16■□□□□ 0.34
TRIM41-206ENST00000514219 C15orf39Q6ZRI6 1047 aa17.16■□□□□ 0.34
TRIM41-206ENST00000514219 TRAPPC11Q7Z392 1133 aa17.16■□□□□ 0.34
TRIM41-206ENST00000514219 LRRC52Q8N7C0 313 aa17.16■□□□□ 0.34
TRIM41-206ENST00000514219 RNF169Q8NCN4 708 aa17.16■□□□□ 0.34
TRIM41-206ENST00000514219 EHBP1Q8NDI1 1231 aa17.16■□□□□ 0.34
TRIM41-206ENST00000514219 CCDC112Q8NEF3 446 aa17.16■□□□□ 0.34
TRIM41-206ENST00000514219 TRIM44Q96DX7 344 aaPredicted RBP17.16■□□□□ 0.34
TRIM41-206ENST00000514219 SPAG5Q96R06 1193 aa17.16■□□□□ 0.34
TRIM41-206ENST00000514219 PPP1R9BQ96SB3 815 aa17.16■□□□□ 0.34
TRIM41-206ENST00000514219 MTMR12Q9C0I1 747 aa17.16■□□□□ 0.34
TRIM41-206ENST00000514219 INTS2Q9H0H0 1204 aaKnown RBP17.16■□□□□ 0.34
TRIM41-206ENST00000514219 COG5Q9UP83 839 aa17.16■□□□□ 0.34
TRIM41-206ENST00000514219 PCDHA11Q9Y5I1 949 aa17.16■□□□□ 0.34
TRIM41-206ENST00000514219 STAU1O95793 577 aaKnown RBP17.15■□□□□ 0.34
TRIM41-206ENST00000514219 C4BPAP04003 597 aaKnown RBP17.15■□□□□ 0.34
TRIM41-206ENST00000514219 GCNT1Q02742 428 aa17.15■□□□□ 0.34
TRIM41-206ENST00000514219 CBWD6Q4V339 395 aa17.15■□□□□ 0.34
TRIM41-206ENST00000514219 EPC2Q52LR7 807 aa17.15■□□□□ 0.34
TRIM41-206ENST00000514219 SEZ6Q53EL9 994 aa17.15■□□□□ 0.34
TRIM41-206ENST00000514219 CBWD3Q5JTY5 395 aa17.15■□□□□ 0.34
TRIM41-206ENST00000514219 CBWD5Q5RIA9 395 aa17.15■□□□□ 0.34
TRIM41-206ENST00000514219 DEFB128Q7Z7B8 93 aa17.15■□□□□ 0.34
TRIM41-206ENST00000514219 SCLYQ96I15 445 aa17.15■□□□□ 0.34
TRIM41-206ENST00000514219 LSM14BQ9BX40 385 aaKnown RBP17.15■□□□□ 0.34
TRIM41-206ENST00000514219 FAM207AQ9NSI2 230 aaPredicted RBP17.15■□□□□ 0.34
TRIM41-206ENST00000514219 DPP3Q9NY33 737 aa17.15■□□□□ 0.34
TRIM41-206ENST00000514219 SIK3Q9Y2K2 1263 aa17.15■□□□□ 0.34
TRIM41-206ENST00000514219 SLC4A7Q9Y6M7 1214 aa17.15■□□□□ 0.34
TRIM41-206ENST00000514219 SMIM28A0A1B0GU29 152 aa17.14■□□□□ 0.33
TRIM41-206ENST00000514219 ARL5CA6NH57 179 aa17.14■□□□□ 0.33
TRIM41-206ENST00000514219 AKR1B15C9JRZ8 316 aaPredicted RBP17.14■□□□□ 0.33
TRIM41-206ENST00000514219 RFXAPO00287 272 aa17.14■□□□□ 0.33
TRIM41-206ENST00000514219 ENPP3O14638 875 aa17.14■□□□□ 0.33
TRIM41-206ENST00000514219 TEX33O43247 280 aa17.14■□□□□ 0.33
TRIM41-206ENST00000514219 NFICP08651 508 aa17.14■□□□□ 0.33
TRIM41-206ENST00000514219 KRT19P08727 400 aa17.14■□□□□ 0.33
TRIM41-206ENST00000514219 AKAP5P24588 427 aa17.14■□□□□ 0.33
TRIM41-206ENST00000514219 PON1P27169 355 aa17.14■□□□□ 0.33
TRIM41-206ENST00000514219 MLH1P40692 756 aa17.14■□□□□ 0.33
TRIM41-206ENST00000514219 ZBED6P86452 979 aa17.14■□□□□ 0.33
TRIM41-206ENST00000514219 ZNF699Q32M78 642 aa17.14■□□□□ 0.33
TRIM41-206ENST00000514219 SV2CQ496J9 727 aa17.14■□□□□ 0.33
TRIM41-206ENST00000514219 TDRD10Q5VZ19 366 aaKnown RBP17.14■□□□□ 0.33
TRIM41-206ENST00000514219 ZNF598Q86UK7 904 aaKnown RBP17.14■□□□□ 0.33
TRIM41-206ENST00000514219 ZSWIM2Q8NEG5 633 aa17.14■□□□□ 0.33
TRIM41-206ENST00000514219 SYN2Q92777 582 aaPredicted RBP17.14■□□□□ 0.33
TRIM41-206ENST00000514219 FAM193BQ96PV7 902 aaPredicted RBP17.14■□□□□ 0.33
TRIM41-206ENST00000514219 NAA15Q9BXJ9 866 aaKnown RBP17.14■□□□□ 0.33
TRIM41-206ENST00000514219 VRTNQ9H8Y1 702 aa17.14■□□□□ 0.33
TRIM41-206ENST00000514219 CAPN11Q9UMQ6 739 aa17.14■□□□□ 0.33
TRIM41-206ENST00000514219 HES2Q9Y543 173 aa17.14■□□□□ 0.33
TRIM41-206ENST00000514219 MGEA5O60502 916 aa17.13■□□□□ 0.33
TRIM41-206ENST00000514219 HLA-DRAP01903 254 aa17.13■□□□□ 0.33
TRIM41-206ENST00000514219 UCHL3P15374 230 aa17.13■□□□□ 0.33
TRIM41-206ENST00000514219 TNNC1P63316 161 aa17.13■□□□□ 0.33
TRIM41-206ENST00000514219 RNASELQ05823 741 aaKnown RBP17.13■□□□□ 0.33
TRIM41-206ENST00000514219 NOMO2Q5JPE7 1267 aa17.13■□□□□ 0.33
TRIM41-206ENST00000514219 C1orf220Q5T0J3 134 aa17.13■□□□□ 0.33
TRIM41-206ENST00000514219 TMEM192Q8IY95 271 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms