RNA–Protein interactions for RNA: ENST00000513178.1

CNGA1-206, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

TSL 3

Gene CNGA1, Length 589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-206ENST00000513178 KIAA0319Q5VV43 1072 aa17.5■□□□□ 0.39
CNGA1-206ENST00000513178 CEP135Q66GS9 1140 aa17.5■□□□□ 0.39
CNGA1-206ENST00000513178 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.5■□□□□ 0.39
CNGA1-206ENST00000513178 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.5■□□□□ 0.39
CNGA1-206ENST00000513178 CCDC127Q96BQ5 260 aa17.5■□□□□ 0.39
CNGA1-206ENST00000513178 EMILIN2Q9BXX0 1053 aa17.5■□□□□ 0.39
CNGA1-206ENST00000513178 BARX2Q9UMQ3 279 aaPredicted RBP17.5■□□□□ 0.39
CNGA1-206ENST00000513178 COG5Q9UP83 839 aa17.5■□□□□ 0.39
CNGA1-206ENST00000513178 TRAF3IP3Q9Y228 551 aa17.5■□□□□ 0.39
CNGA1-206ENST00000513178 LILRB3O75022 631 aa17.49■□□□□ 0.39
CNGA1-206ENST00000513178 FGFR3P22607 806 aa17.49■□□□□ 0.39
CNGA1-206ENST00000513178 CASP4P49662 377 aa17.49■□□□□ 0.39
CNGA1-206ENST00000513178 DLX2Q07687 328 aaPredicted RBP17.49■□□□□ 0.39
CNGA1-206ENST00000513178 COL19A1Q14993 1142 aa17.49■□□□□ 0.39
CNGA1-206ENST00000513178 PSMD6Q15008 389 aa17.49■□□□□ 0.39
CNGA1-206ENST00000513178 PSMD5Q16401 504 aa17.49■□□□□ 0.39
CNGA1-206ENST00000513178 ZCWPW2Q504Y3 356 aa17.49■□□□□ 0.39
CNGA1-206ENST00000513178 NT5DC4Q86YG4 428 aa17.49■□□□□ 0.39
CNGA1-206ENST00000513178 SLC9A9Q8IVB4 645 aa17.49■□□□□ 0.39
CNGA1-206ENST00000513178 KLHL5Q96PQ7 755 aa17.49■□□□□ 0.39
CNGA1-206ENST00000513178 NUP62CLQ9H1M0 184 aa17.49■□□□□ 0.39
CNGA1-206ENST00000513178 DMAC2Q9NW81 257 aa17.49■□□□□ 0.39
CNGA1-206ENST00000513178 SSX2IPQ9Y2D8 614 aa17.49■□□□□ 0.39
CNGA1-206ENST00000513178 HCFC2Q9Y5Z7 792 aa17.49■□□□□ 0.39
CNGA1-206ENST00000513178 C2orf16Q68DN1 1984 aa17.49■□□□□ 0.39
CNGA1-206ENST00000513178 TEX28O15482 410 aa17.48■□□□□ 0.39
CNGA1-206ENST00000513178 NCK2O43639 380 aa17.48■□□□□ 0.39
CNGA1-206ENST00000513178 ITGB3P05106 788 aa17.48■□□□□ 0.39
CNGA1-206ENST00000513178 CD44P16070 742 aaKnown RBP17.48■□□□□ 0.39
CNGA1-206ENST00000513178 EPCAMP16422 314 aa17.48■□□□□ 0.39
CNGA1-206ENST00000513178 BMP6P22004 513 aa17.48■□□□□ 0.39
CNGA1-206ENST00000513178 KLRC2P26717 231 aa17.48■□□□□ 0.39
CNGA1-206ENST00000513178 POLR2BP30876 1174 aaKnown RBP17.48■□□□□ 0.39
CNGA1-206ENST00000513178 LTBRP36941 435 aa17.48■□□□□ 0.39
CNGA1-206ENST00000513178 ADAM15Q13444 863 aa17.48■□□□□ 0.39
CNGA1-206ENST00000513178 STIM1Q13586 685 aa17.48■□□□□ 0.39
CNGA1-206ENST00000513178 MORC3Q14149 939 aa17.48■□□□□ 0.39
CNGA1-206ENST00000513178 SURF1Q15526 300 aa17.48■□□□□ 0.39
CNGA1-206ENST00000513178 CTC1Q2NKJ3 1217 aa17.48■□□□□ 0.39
CNGA1-206ENST00000513178 COBLL1Q53SF7 1204 aa17.48■□□□□ 0.39
CNGA1-206ENST00000513178 KLHL10Q6JEL2 608 aa17.48■□□□□ 0.39
CNGA1-206ENST00000513178 ADSSL1Q8N142 457 aa17.48■□□□□ 0.39
CNGA1-206ENST00000513178 C1orf127Q8N9H9 656 aa17.48■□□□□ 0.39
CNGA1-206ENST00000513178 OR5B17Q8NGF7 314 aa17.48■□□□□ 0.39
CNGA1-206ENST00000513178 GPT2Q8TD30 523 aa17.48■□□□□ 0.39
CNGA1-206ENST00000513178 CACTINQ8WUQ7 758 aaKnown RBP17.48■□□□□ 0.39
CNGA1-206ENST00000513178 PIK3R5Q8WYR1 880 aa17.48■□□□□ 0.39
CNGA1-206ENST00000513178 EEF2KMTQ96G04 330 aa17.48■□□□□ 0.39
CNGA1-206ENST00000513178 ANKRD36BP1Q96IX9 119 aa17.48■□□□□ 0.39
CNGA1-206ENST00000513178 SUSD3Q96L08 255 aa17.48■□□□□ 0.39
CNGA1-206ENST00000513178 FNBP1Q96RU3 617 aa17.48■□□□□ 0.39
CNGA1-206ENST00000513178 POP1Q99575 1024 aaKnown RBP17.48■□□□□ 0.39
CNGA1-206ENST00000513178 CGRRF1Q99675 332 aa17.48■□□□□ 0.39
CNGA1-206ENST00000513178 INTS13Q9NVM9 706 aa17.48■□□□□ 0.39
CNGA1-206ENST00000513178 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.47■□□□□ 0.39
CNGA1-206ENST00000513178 ANO9A1A5B4 782 aa17.47■□□□□ 0.39
CNGA1-206ENST00000513178 FSD2A1L4K1 749 aa17.47■□□□□ 0.39
CNGA1-206ENST00000513178 TRIM49BA6NDI0 452 aa17.47■□□□□ 0.39
CNGA1-206ENST00000513178 PIRO00625 290 aa17.47■□□□□ 0.39
CNGA1-206ENST00000513178 SPTLC1O15269 473 aa17.47■□□□□ 0.39
CNGA1-206ENST00000513178 TNNC2P02585 160 aa17.47■□□□□ 0.39
CNGA1-206ENST00000513178 ADH1AP07327 375 aa17.47■□□□□ 0.39
CNGA1-206ENST00000513178 KRT19P08727 400 aa17.47■□□□□ 0.39
CNGA1-206ENST00000513178 TNNI1P19237 187 aa17.47■□□□□ 0.39
CNGA1-206ENST00000513178 SCARA3Q6AZY7 606 aa17.47■□□□□ 0.39
CNGA1-206ENST00000513178 DSTYKQ6XUX3 929 aa17.47■□□□□ 0.39
CNGA1-206ENST00000513178 WDR49Q8IV35 697 aa17.47■□□□□ 0.39
CNGA1-206ENST00000513178 LNX1Q8TBB1 728 aaPredicted RBP17.47■□□□□ 0.39
CNGA1-206ENST00000513178 PLEKHO2Q8TD55 490 aa17.47■□□□□ 0.39
CNGA1-206ENST00000513178 MFSD14AQ96MC6 490 aa17.47■□□□□ 0.39
CNGA1-206ENST00000513178 TSG101Q99816 390 aa17.47■□□□□ 0.39
CNGA1-206ENST00000513178 GTPBP4Q9BZE4 634 aaKnown RBP17.47■□□□□ 0.39
CNGA1-206ENST00000513178 GZF1Q9H116 711 aaPredicted RBP17.47■□□□□ 0.39
CNGA1-206ENST00000513178 RXFP1Q9HBX9 757 aa17.47■□□□□ 0.39
CNGA1-206ENST00000513178 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.47■□□□□ 0.39
CNGA1-206ENST00000513178 KIAA1468Q9P260 1216 aa17.47■□□□□ 0.39
CNGA1-206ENST00000513178 ITGA11Q9UKX5 1188 aa17.47■□□□□ 0.39
CNGA1-206ENST00000513178 AGAP1Q9UPQ3 857 aa17.47■□□□□ 0.39
CNGA1-206ENST00000513178 CTNND2Q9UQB3 1225 aa17.47■□□□□ 0.39
CNGA1-206ENST00000513178 FRMD4BQ9Y2L6 1034 aa17.47■□□□□ 0.39
CNGA1-206ENST00000513178 C5orf42Q9H799 3197 aa17.47■□□□□ 0.39
CNGA1-206ENST00000513178 PSMA7O14818 248 aa17.46■□□□□ 0.39
CNGA1-206ENST00000513178 SRGAP2BP0DMP2 458 aa17.46■□□□□ 0.39
CNGA1-206ENST00000513178 AARSP49588 968 aaKnown RBP eCLIP17.46■□□□□ 0.39
CNGA1-206ENST00000513178 TAF6P49848 677 aa17.46■□□□□ 0.39
CNGA1-206ENST00000513178 KCNQ1P51787 676 aa17.46■□□□□ 0.39
CNGA1-206ENST00000513178 CLCN4P51793 760 aa17.46■□□□□ 0.39
CNGA1-206ENST00000513178 PMS1P54277 932 aaKnown RBP17.46■□□□□ 0.39
CNGA1-206ENST00000513178 LILRA4P59901 499 aa17.46■□□□□ 0.39
CNGA1-206ENST00000513178 CREMQ03060 361 aa17.46■□□□□ 0.39
CNGA1-206ENST00000513178 BFSP1Q12934 665 aa17.46■□□□□ 0.39
CNGA1-206ENST00000513178 NFIL3Q16649 462 aa17.46■□□□□ 0.39
CNGA1-206ENST00000513178 VARS2Q5ST30 1063 aaKnown RBP17.46■□□□□ 0.39
CNGA1-206ENST00000513178 CSGALNACT2Q8N6G5 542 aa17.46■□□□□ 0.39
CNGA1-206ENST00000513178 TMEM174Q8WUU8 243 aa17.46■□□□□ 0.39
CNGA1-206ENST00000513178 ZNF560Q96MR9 790 aa17.46■□□□□ 0.39
CNGA1-206ENST00000513178 APOL5Q9BWW9 433 aa17.46■□□□□ 0.39
CNGA1-206ENST00000513178 CLEC1BQ9P126 229 aa17.46■□□□□ 0.39
CNGA1-206ENST00000513178 SIX4Q9UIU6 781 aa17.46■□□□□ 0.39
CNGA1-206ENST00000513178 PCDHB8Q9UN66 801 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms