RNA–Protein interactions for RNA: ENST00000513048.5

DHFR-206, Transcript of dihydrofolate reductase, humanhuman

TSL 1 (best)

Gene DHFR, Length 994 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-206ENST00000513048 CENPFP49454 3210 aa10.06□□□□□ -0.8
DHFR-206ENST00000513048 SSU72P8A0A1W2PR75 194 aa10.06□□□□□ -0.8
DHFR-206ENST00000513048 C9IYK1 514 aa10.06□□□□□ -0.8
DHFR-206ENST00000513048 TULP1O00294 542 aaPredicted RBP10.06□□□□□ -0.8
DHFR-206ENST00000513048 ZNF263O14978 683 aa10.06□□□□□ -0.8
DHFR-206ENST00000513048 INPPL1O15357 1258 aa10.06□□□□□ -0.8
DHFR-206ENST00000513048 PHACTR2O75167 634 aa10.06□□□□□ -0.8
DHFR-206ENST00000513048 STAU1O95793 577 aaKnown RBP10.06□□□□□ -0.8
DHFR-206ENST00000513048 CXCL10P02778 98 aa10.06□□□□□ -0.8
DHFR-206ENST00000513048 SERPING1P05155 500 aa10.06□□□□□ -0.8
DHFR-206ENST00000513048 ZSCAN20P17040 1043 aaPredicted RBP10.06□□□□□ -0.8
DHFR-206ENST00000513048 EIF4A3P38919 411 aaKnown RBP10.06□□□□□ -0.8
DHFR-206ENST00000513048 STAT1P42224 750 aa10.06□□□□□ -0.8
DHFR-206ENST00000513048 RAB27AP51159 221 aa10.06□□□□□ -0.8
DHFR-206ENST00000513048 MFAP3P55082 362 aa10.06□□□□□ -0.8
DHFR-206ENST00000513048 NOP14P78316 857 aaKnown RBP10.06□□□□□ -0.8
DHFR-206ENST00000513048 FAM189BP81408 668 aa10.06□□□□□ -0.8
DHFR-206ENST00000513048 SOX4Q06945 474 aaPredicted RBP10.06□□□□□ -0.8
DHFR-206ENST00000513048 NAB2Q15742 525 aa10.06□□□□□ -0.8
DHFR-206ENST00000513048 ASIC2Q16515 512 aa10.06□□□□□ -0.8
DHFR-206ENST00000513048 ARHGAP44Q17R89 818 aa10.06□□□□□ -0.8
DHFR-206ENST00000513048 LRRC26Q2I0M4 334 aa10.06□□□□□ -0.8
DHFR-206ENST00000513048 SGSM1Q2NKQ1 1148 aa10.06□□□□□ -0.8
DHFR-206ENST00000513048 PLEKHG4Q58EX7 1191 aa10.06□□□□□ -0.8
DHFR-206ENST00000513048 ECHDC2Q86YB7 292 aa10.06□□□□□ -0.8
DHFR-206ENST00000513048 FAM71AQ8IYT1 594 aa10.06□□□□□ -0.8
DHFR-206ENST00000513048 PPM1KQ8N3J5 372 aa10.06□□□□□ -0.8
DHFR-206ENST00000513048 TAF4BQ92750 862 aa10.06□□□□□ -0.8
DHFR-206ENST00000513048 C18orf25Q96B23 403 aaPredicted RBP10.06□□□□□ -0.8
DHFR-206ENST00000513048 PPP1R10Q96QC0 940 aaKnown RBP10.06□□□□□ -0.8
DHFR-206ENST00000513048 SPAG5Q96R06 1193 aa10.06□□□□□ -0.8
DHFR-206ENST00000513048 ARID3AQ99856 593 aa10.06□□□□□ -0.8
DHFR-206ENST00000513048 IFIH1Q9BYX4 1025 aaKnown RBP10.06□□□□□ -0.8
DHFR-206ENST00000513048 VRTNQ9H8Y1 702 aa10.06□□□□□ -0.8
DHFR-206ENST00000513048 NHEJ1Q9H9Q4 299 aaPredicted RBP10.06□□□□□ -0.8
DHFR-206ENST00000513048 C1orf112Q9NSG2 853 aa10.06□□□□□ -0.8
DHFR-206ENST00000513048 RNF19AQ9NV58 838 aa10.06□□□□□ -0.8
DHFR-206ENST00000513048 ZNHIT6Q9NWK9 470 aaKnown RBP10.06□□□□□ -0.8
DHFR-206ENST00000513048 DPP3Q9NY33 737 aa10.06□□□□□ -0.8
DHFR-206ENST00000513048 TUBGCP4Q9UGJ1 667 aa10.06□□□□□ -0.8
DHFR-206ENST00000513048 PARP2Q9UGN5 583 aa10.06□□□□□ -0.8
DHFR-206ENST00000513048 ITGA11Q9UKX5 1188 aa10.06□□□□□ -0.8
DHFR-206ENST00000513048 NENFQ9UMX5 172 aa10.06□□□□□ -0.8
DHFR-206ENST00000513048 CNTN6Q9UQ52 1028 aa10.06□□□□□ -0.8
DHFR-206ENST00000513048 ADGRG1Q9Y653 693 aa10.06□□□□□ -0.8
DHFR-206ENST00000513048 SCN1AP35498 2009 aa10.06□□□□□ -0.8
DHFR-206ENST00000513048 ANO9A1A5B4 782 aa10.05□□□□□ -0.8
DHFR-206ENST00000513048 USP27XA6NNY8 438 aa10.05□□□□□ -0.8
DHFR-206ENST00000513048 DCDC2CA8MYV0 355 aa10.05□□□□□ -0.8
DHFR-206ENST00000513048 EIF3CLB5ME19 914 aaKnown RBP10.05□□□□□ -0.8
DHFR-206ENST00000513048 PPEF2O14830 753 aa10.05□□□□□ -0.8
DHFR-206ENST00000513048 ZNF500O60304 480 aaPredicted RBP10.05□□□□□ -0.8
DHFR-206ENST00000513048 EVI5O60447 810 aa10.05□□□□□ -0.8
DHFR-206ENST00000513048 GFPT2O94808 682 aa10.05□□□□□ -0.8
DHFR-206ENST00000513048 NDUFA10O95299 355 aa10.05□□□□□ -0.8
DHFR-206ENST00000513048 LCA5LO95447 670 aa10.05□□□□□ -0.8
DHFR-206ENST00000513048 ITGB3P05106 788 aa10.05□□□□□ -0.8
DHFR-206ENST00000513048 ITGA4P13612 1032 aa10.05□□□□□ -0.8
DHFR-206ENST00000513048 FERP16591 822 aa10.05□□□□□ -0.8
DHFR-206ENST00000513048 CYP3A5P20815 502 aa10.05□□□□□ -0.8
DHFR-206ENST00000513048 POLR2BP30876 1174 aaKnown RBP10.05□□□□□ -0.8
DHFR-206ENST00000513048 CLCN1P35523 988 aa10.05□□□□□ -0.8
DHFR-206ENST00000513048 ASPAP45381 313 aa10.05□□□□□ -0.8
DHFR-206ENST00000513048 AFF1P51825 1210 aaKnown RBP10.05□□□□□ -0.8
DHFR-206ENST00000513048 PTK2Q05397 1052 aa10.05□□□□□ -0.8
DHFR-206ENST00000513048 PDAP1Q13442 181 aaKnown RBP10.05□□□□□ -0.8
DHFR-206ENST00000513048 CUL2Q13617 745 aa10.05□□□□□ -0.8
DHFR-206ENST00000513048 TSR1Q2NL82 804 aaKnown RBP10.05□□□□□ -0.8
DHFR-206ENST00000513048 WDR44Q5JSH3 913 aa10.05□□□□□ -0.8
DHFR-206ENST00000513048 GLRA4Q5JXX5 417 aa10.05□□□□□ -0.8
DHFR-206ENST00000513048 SMYD5Q6GMV2 418 aa10.05□□□□□ -0.8
DHFR-206ENST00000513048 FAM43BQ6ZT52 329 aaPredicted RBP10.05□□□□□ -0.8
DHFR-206ENST00000513048 ENOSF1Q7L5Y1 443 aa10.05□□□□□ -0.8
DHFR-206ENST00000513048 ZNF571Q7Z3V5 609 aaPredicted RBP10.05□□□□□ -0.8
DHFR-206ENST00000513048 REXO1L1PQ8IX06 675 aa10.05□□□□□ -0.8
DHFR-206ENST00000513048 CCDC170Q8IYT3 715 aa10.05□□□□□ -0.8
DHFR-206ENST00000513048 CCAR2Q8N163 923 aaKnown RBP10.05□□□□□ -0.8
DHFR-206ENST00000513048 LPPQ93052 612 aa10.05□□□□□ -0.8
DHFR-206ENST00000513048 JAKMIP2Q96AA8 810 aa10.05□□□□□ -0.8
DHFR-206ENST00000513048 FAXDC2Q96IV6 333 aa10.05□□□□□ -0.8
DHFR-206ENST00000513048 FAM81BQ96LP2 452 aa10.05□□□□□ -0.8
DHFR-206ENST00000513048 ZFP42Q96MM3 310 aa10.05□□□□□ -0.8
DHFR-206ENST00000513048 EIF3CQ99613 913 aaKnown RBP10.05□□□□□ -0.8
DHFR-206ENST00000513048 DESI2Q9BSY9 194 aa10.05□□□□□ -0.8
DHFR-206ENST00000513048 BCO2Q9BYV7 579 aa10.05□□□□□ -0.8
DHFR-206ENST00000513048 HIPK3Q9H422 1215 aa10.05□□□□□ -0.8
DHFR-206ENST00000513048 HAUS4Q9H6D7 363 aa10.05□□□□□ -0.8
DHFR-206ENST00000513048 SPTLC3Q9NUV7 552 aa10.05□□□□□ -0.8
DHFR-206ENST00000513048 MIOSQ9NXC5 875 aa10.05□□□□□ -0.8
DHFR-206ENST00000513048 PCDH10Q9P2E7 1040 aa10.05□□□□□ -0.8
DHFR-206ENST00000513048 UBQLN1Q9UMX0 589 aaKnown RBP10.05□□□□□ -0.8
DHFR-206ENST00000513048 GIT1Q9Y2X7 761 aa10.05□□□□□ -0.8
DHFR-206ENST00000513048 EPN1Q9Y6I3 576 aaPredicted RBP10.05□□□□□ -0.8
DHFR-206ENST00000513048 ALPK3Q96L96 1907 aa10.04□□□□□ -0.8
DHFR-206ENST00000513048 A0A0U1RQJ8 604 aa10.04□□□□□ -0.8
DHFR-206ENST00000513048 PIRO00625 290 aa10.04□□□□□ -0.8
DHFR-206ENST00000513048 NRDCO43847 1150 aa10.04□□□□□ -0.8
DHFR-206ENST00000513048 SKIP12755 728 aa10.04□□□□□ -0.8
DHFR-206ENST00000513048 TBXAS1P24557 533 aaPredicted RBP10.04□□□□□ -0.8
DHFR-206ENST00000513048 LRPAP1P30533 357 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms