RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 NUP133Q8WUM0 1156 aa3.15□□□□□ -1.91
PDGFC-208ENST00000512711 PDLIM2Q96JY6 352 aa3.15□□□□□ -1.91
PDGFC-208ENST00000512711 C7orf25Q9BPX7 421 aa3.15□□□□□ -1.91
PDGFC-208ENST00000512711 REXO4Q9GZR2 422 aaKnown RBP3.15□□□□□ -1.91
PDGFC-208ENST00000512711 ADARB2Q9NS39 739 aaKnown RBP3.15□□□□□ -1.91
PDGFC-208ENST00000512711 TBCCD1Q9NVR7 557 aa3.15□□□□□ -1.91
PDGFC-208ENST00000512711 SLC5A4Q9NY91 659 aa3.15□□□□□ -1.91
PDGFC-208ENST00000512711 KCNE5Q9UJ90 142 aa3.15□□□□□ -1.91
PDGFC-208ENST00000512711 TLK1Q9UKI8 766 aa3.15□□□□□ -1.91
PDGFC-208ENST00000512711 IPPQ9Y573 584 aa3.15□□□□□ -1.91
PDGFC-208ENST00000512711 PCDHB1Q9Y5F3 818 aa3.15□□□□□ -1.91
PDGFC-208ENST00000512711 TRIM75PA6NK02 468 aa3.14□□□□□ -1.91
PDGFC-208ENST00000512711 GRM6O15303 877 aa3.14□□□□□ -1.91
PDGFC-208ENST00000512711 NDUFS2O75306 463 aa3.14□□□□□ -1.91
PDGFC-208ENST00000512711 ERN1O75460 977 aaKnown RBP3.14□□□□□ -1.91
PDGFC-208ENST00000512711 AGFG2O95081 481 aa3.14□□□□□ -1.91
PDGFC-208ENST00000512711 CPEP16870 476 aa3.14□□□□□ -1.91
PDGFC-208ENST00000512711 CTXN1P60606 82 aa3.14□□□□□ -1.91
PDGFC-208ENST00000512711 BLOC1S1P78537 153 aa3.14□□□□□ -1.91
PDGFC-208ENST00000512711 PCBP2Q15366 365 aaKnown RBP eCLIP3.14□□□□□ -1.91
PDGFC-208ENST00000512711 SF3B3Q15393 1217 aaKnown RBP3.14□□□□□ -1.91
PDGFC-208ENST00000512711 C3orf36Q3SXR2 165 aa3.14□□□□□ -1.91
PDGFC-208ENST00000512711 CD300EQ496F6 205 aaPredicted RBP3.14□□□□□ -1.91
PDGFC-208ENST00000512711 LRCH2Q5VUJ6 765 aa3.14□□□□□ -1.91
PDGFC-208ENST00000512711 SP5Q6BEB4 398 aaPredicted RBP3.14□□□□□ -1.91
PDGFC-208ENST00000512711 ARMC6Q6NXE6 501 aa3.14□□□□□ -1.91
PDGFC-208ENST00000512711 SYCE2Q6PIF2 218 aa3.14□□□□□ -1.91
PDGFC-208ENST00000512711 FOXR2Q6PJQ5 311 aa3.14□□□□□ -1.91
PDGFC-208ENST00000512711 LNX2Q8N448 690 aa3.14□□□□□ -1.91
PDGFC-208ENST00000512711 C1orf162Q8NEQ5 155 aaPredicted RBP3.14□□□□□ -1.91
PDGFC-208ENST00000512711 SLC30A5Q8TAD4 765 aa3.14□□□□□ -1.91
PDGFC-208ENST00000512711 CAGE1Q8TC20 777 aa3.14□□□□□ -1.91
PDGFC-208ENST00000512711 IFI44Q8TCB0 444 aa3.14□□□□□ -1.91
PDGFC-208ENST00000512711 FBXO41Q8TF61 875 aa3.14□□□□□ -1.91
PDGFC-208ENST00000512711 ZNF384Q8TF68 577 aa3.14□□□□□ -1.91
PDGFC-208ENST00000512711 FAXDC2Q96IV6 333 aa3.14□□□□□ -1.91
PDGFC-208ENST00000512711 PNKPQ96T60 521 aa3.14□□□□□ -1.91
PDGFC-208ENST00000512711 C11orf54Q9H0W9 315 aaPredicted RBP3.14□□□□□ -1.91
PDGFC-208ENST00000512711 KLK15Q9H2R5 256 aa3.14□□□□□ -1.91
PDGFC-208ENST00000512711 KIAA1586Q9HCI6 787 aa3.14□□□□□ -1.91
PDGFC-208ENST00000512711 SEMA4GQ9NTN9 838 aa3.14□□□□□ -1.91
PDGFC-208ENST00000512711 FAM171A2A8MVW0 826 aa3.13□□□□□ -1.91
PDGFC-208ENST00000512711 HTRA2O43464 458 aaPredicted RBP3.13□□□□□ -1.91
PDGFC-208ENST00000512711 MT-CO1P00395 513 aa3.13□□□□□ -1.91
PDGFC-208ENST00000512711 WASP42768 502 aa3.13□□□□□ -1.91
PDGFC-208ENST00000512711 HNRNPMP52272 730 aaKnown RBP eCLIP3.13□□□□□ -1.91
PDGFC-208ENST00000512711 EVA1CP58658 441 aa3.13□□□□□ -1.91
PDGFC-208ENST00000512711 MRPS35P82673 323 aaKnown RBP3.13□□□□□ -1.91
PDGFC-208ENST00000512711 MXRA7P84157 204 aa3.13□□□□□ -1.91
PDGFC-208ENST00000512711 CREMQ03060 361 aa3.13□□□□□ -1.91
PDGFC-208ENST00000512711 ODF1Q14990 250 aa3.13□□□□□ -1.91
PDGFC-208ENST00000512711 ACAP2Q15057 778 aa3.13□□□□□ -1.91
PDGFC-208ENST00000512711 ERCC6LQ2NKX8 1250 aa3.13□□□□□ -1.91
PDGFC-208ENST00000512711 SSH3Q8TE77 659 aa3.13□□□□□ -1.91
PDGFC-208ENST00000512711 KAT5Q92993 513 aa3.13□□□□□ -1.91
PDGFC-208ENST00000512711 TMX3Q96JJ7 454 aa3.13□□□□□ -1.91
PDGFC-208ENST00000512711 MRGPRX4Q96LA9 322 aa3.13□□□□□ -1.91
PDGFC-208ENST00000512711 KLHL32Q96NJ5 620 aa3.13□□□□□ -1.91
PDGFC-208ENST00000512711 DUSP26Q9BV47 211 aa3.13□□□□□ -1.91
PDGFC-208ENST00000512711 MANSC1Q9H8J5 431 aa3.13□□□□□ -1.91
PDGFC-208ENST00000512711 ASB6Q9NWX5 421 aa3.13□□□□□ -1.91
PDGFC-208ENST00000512711 KCTD5Q9NXV2 234 aa3.13□□□□□ -1.91
PDGFC-208ENST00000512711 CTTNBP2NLQ9P2B4 639 aa3.13□□□□□ -1.91
PDGFC-208ENST00000512711 SERPINB13Q9UIV8 391 aa3.13□□□□□ -1.91
PDGFC-208ENST00000512711 WASHC2AQ641Q2 1341 aa3.13□□□□□ -1.91
PDGFC-208ENST00000512711 SETD1BQ9UPS6 1966 aaKnown RBP3.12□□□□□ -1.91
PDGFC-208ENST00000512711 COL3A1P02461 1466 aaPredicted RBP3.12□□□□□ -1.91
PDGFC-208ENST00000512711 CCDC154A6NI56 674 aa3.12□□□□□ -1.91
PDGFC-208ENST00000512711 PRSS29PA6NIE9 313 aa3.12□□□□□ -1.91
PDGFC-208ENST00000512711 VWC2LB2RUY7 222 aa3.12□□□□□ -1.91
PDGFC-208ENST00000512711 FZD9O00144 591 aa3.12□□□□□ -1.91
PDGFC-208ENST00000512711 YY2O15391 372 aa3.12□□□□□ -1.91
PDGFC-208ENST00000512711 TEX33O43247 280 aa3.12□□□□□ -1.91
PDGFC-208ENST00000512711 SUN1O94901 812 aa3.12□□□□□ -1.91
PDGFC-208ENST00000512711 ALAS1P13196 640 aa3.12□□□□□ -1.91
PDGFC-208ENST00000512711 CD38P28907 300 aa3.12□□□□□ -1.91
PDGFC-208ENST00000512711 FOLR3P41439 243 aa3.12□□□□□ -1.91
PDGFC-208ENST00000512711 CACNA2D1P54289 1103 aa3.12□□□□□ -1.91
PDGFC-208ENST00000512711 ELLP55199 621 aaPredicted RBP3.12□□□□□ -1.91
PDGFC-208ENST00000512711 MC2RQ01718 297 aa3.12□□□□□ -1.91
PDGFC-208ENST00000512711 GJC2Q5T442 439 aaPredicted RBP3.12□□□□□ -1.91
PDGFC-208ENST00000512711 ZKSCAN2Q63HK3 967 aa3.12□□□□□ -1.91
PDGFC-208ENST00000512711 KIAA0895LQ68EN5 471 aa3.12□□□□□ -1.91
PDGFC-208ENST00000512711 VWA1Q6PCB0 445 aa3.12□□□□□ -1.91
PDGFC-208ENST00000512711 AMOTL1Q8IY63 956 aa3.12□□□□□ -1.91
PDGFC-208ENST00000512711 SLC17A8Q8NDX2 589 aa3.12□□□□□ -1.91
PDGFC-208ENST00000512711 TMIEQ8NEW7 156 aa3.12□□□□□ -1.91
PDGFC-208ENST00000512711 IL17RDQ8NFM7 739 aa3.12□□□□□ -1.91
PDGFC-208ENST00000512711 ACTRT2Q8TDY3 377 aa3.12□□□□□ -1.91
PDGFC-208ENST00000512711 TFAP2BQ92481 460 aa3.12□□□□□ -1.91
PDGFC-208ENST00000512711 LPIN2Q92539 896 aa3.12□□□□□ -1.91
PDGFC-208ENST00000512711 VRK1Q99986 396 aaPredicted RBP3.12□□□□□ -1.91
PDGFC-208ENST00000512711 SPATA5L1Q9BVQ7 753 aa3.12□□□□□ -1.91
PDGFC-208ENST00000512711 PUS7LQ9H0K6 701 aaKnown RBP3.12□□□□□ -1.91
PDGFC-208ENST00000512711 TDP1Q9NUW8 608 aa3.12□□□□□ -1.91
PDGFC-208ENST00000512711 MRPS18AQ9NVS2 196 aaKnown RBP3.12□□□□□ -1.91
PDGFC-208ENST00000512711 MKS1Q9NXB0 559 aa3.12□□□□□ -1.91
PDGFC-208ENST00000512711 LRIT1Q9P2V4 623 aa3.12□□□□□ -1.91
PDGFC-208ENST00000512711 CDYLQ9Y232 598 aa3.12□□□□□ -1.91
PDGFC-208ENST00000512711 ATP8A1Q9Y2Q0 1164 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms