RNA–Protein interactions for RNA: ENST00000512632.5

LIMCH1-215, Transcript of LIM and calponin homology domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMCH1, Length 4,792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-215ENST00000512632 ADGRA3Q8IWK6 1321 aa9.83□□□□□ -0.84
LIMCH1-215ENST00000512632 PROSCO94903 275 aa9.83□□□□□ -0.84
LIMCH1-215ENST00000512632 TCF4P15884 667 aa9.83□□□□□ -0.84
LIMCH1-215ENST00000512632 WNT7BP56706 349 aa9.83□□□□□ -0.84
LIMCH1-215ENST00000512632 RNASELQ05823 741 aaKnown RBP9.83□□□□□ -0.84
LIMCH1-215ENST00000512632 ANKLE1Q8NAG6 615 aa9.83□□□□□ -0.84
LIMCH1-215ENST00000512632 C7orf43Q8WVR3 580 aa9.83□□□□□ -0.84
LIMCH1-215ENST00000512632 MAIP1Q8WWC4 291 aa9.83□□□□□ -0.84
LIMCH1-215ENST00000512632 IFT74Q96LB3 600 aa9.83□□□□□ -0.84
LIMCH1-215ENST00000512632 RMDN3Q96TC7 470 aa9.83□□□□□ -0.84
LIMCH1-215ENST00000512632 C15orf41Q9Y2V0 281 aa9.83□□□□□ -0.84
LIMCH1-215ENST00000512632 A0A1B0GUA9 196 aa9.82□□□□□ -0.84
LIMCH1-215ENST00000512632 SPDYE2BA6NHP3 402 aa9.82□□□□□ -0.84
LIMCH1-215ENST00000512632 TLR3O15455 904 aaKnown RBP9.82□□□□□ -0.84
LIMCH1-215ENST00000512632 ICAM1P05362 532 aa9.82□□□□□ -0.84
LIMCH1-215ENST00000512632 SPDYE6P0CI01 402 aa9.82□□□□□ -0.84
LIMCH1-215ENST00000512632 PSMC4P43686 418 aa9.82□□□□□ -0.84
LIMCH1-215ENST00000512632 PLCB3Q01970 1234 aa9.82□□□□□ -0.84
LIMCH1-215ENST00000512632 BRDTQ58F21 947 aaPredicted RBP9.82□□□□□ -0.84
LIMCH1-215ENST00000512632 TMEM270Q6UE05 265 aa9.82□□□□□ -0.84
LIMCH1-215ENST00000512632 C4orf19Q8IY42 314 aa9.82□□□□□ -0.84
LIMCH1-215ENST00000512632 GBP7Q8N8V2 638 aaPredicted RBP9.82□□□□□ -0.84
LIMCH1-215ENST00000512632 FAM151AQ8WW52 585 aa9.82□□□□□ -0.84
LIMCH1-215ENST00000512632 TMEM237Q96Q45 408 aa9.82□□□□□ -0.84
LIMCH1-215ENST00000512632 FNBP1Q96RU3 617 aa9.82□□□□□ -0.84
LIMCH1-215ENST00000512632 GABBR1Q9UBS5 961 aa9.82□□□□□ -0.84
LIMCH1-215ENST00000512632 PCDHB2Q9Y5E7 798 aa9.82□□□□□ -0.84
LIMCH1-215ENST00000512632 KIF13BQ9NQT8 1826 aa9.82□□□□□ -0.84
LIMCH1-215ENST00000512632 SIPA1L1O43166 1804 aa9.82□□□□□ -0.84
LIMCH1-215ENST00000512632 GOLGA8SH3BPF8 625 aa9.82□□□□□ -0.84
LIMCH1-215ENST00000512632 GOLGA8MH3BSY2 632 aa9.82□□□□□ -0.84
LIMCH1-215ENST00000512632 IL9RQ01113 521 aa9.82□□□□□ -0.84
LIMCH1-215ENST00000512632 STRN3Q13033 797 aa9.82□□□□□ -0.84
LIMCH1-215ENST00000512632 RHOT1Q8IXI2 618 aa9.82□□□□□ -0.84
LIMCH1-215ENST00000512632 ANKRD35Q8N283 1001 aa9.82□□□□□ -0.84
LIMCH1-215ENST00000512632 ERP27Q96DN0 273 aa9.82□□□□□ -0.84
LIMCH1-215ENST00000512632 MAGEB18Q96M61 343 aa9.82□□□□□ -0.84
LIMCH1-215ENST00000512632 ST6GALNAC4Q9H4F1 302 aa9.82□□□□□ -0.84
LIMCH1-215ENST00000512632 VPS37BQ9H9H4 285 aa9.82□□□□□ -0.84
LIMCH1-215ENST00000512632 TBC1D22BQ9NU19 505 aa9.82□□□□□ -0.84
LIMCH1-215ENST00000512632 NOP53Q9NZM5 478 aaKnown RBP9.82□□□□□ -0.84
LIMCH1-215ENST00000512632 CEP83Q9Y592 693 aa9.82□□□□□ -0.84
LIMCH1-215ENST00000512632 MAPK13O15264 365 aa9.82□□□□□ -0.84
LIMCH1-215ENST00000512632 PMM2O15305 246 aa9.82□□□□□ -0.84
LIMCH1-215ENST00000512632 HLA-DRAP01903 254 aa9.82□□□□□ -0.84
LIMCH1-215ENST00000512632 PAX7P23759 505 aa9.82□□□□□ -0.84
LIMCH1-215ENST00000512632 PKN2Q16513 984 aaKnown RBP9.82□□□□□ -0.84
LIMCH1-215ENST00000512632 CCNG2Q16589 344 aa9.82□□□□□ -0.84
LIMCH1-215ENST00000512632 SEZ6Q53EL9 994 aa9.82□□□□□ -0.84
LIMCH1-215ENST00000512632 WDR44Q5JSH3 913 aa9.82□□□□□ -0.84
LIMCH1-215ENST00000512632 MIS18BP1Q6P0N0 1132 aa9.82□□□□□ -0.84
LIMCH1-215ENST00000512632 ZNF449Q6P9G9 518 aa9.82□□□□□ -0.84
LIMCH1-215ENST00000512632 CRELD2Q6UXH1 353 aaPredicted RBP9.82□□□□□ -0.84
LIMCH1-215ENST00000512632 MFSD14AQ96MC6 490 aa9.82□□□□□ -0.84
LIMCH1-215ENST00000512632 EBF2Q9HAK2 575 aa9.82□□□□□ -0.84
LIMCH1-215ENST00000512632 ARHGEF3Q9NR81 526 aa9.82□□□□□ -0.84
LIMCH1-215ENST00000512632 PRKAG3Q9UGI9 489 aa9.82□□□□□ -0.84
LIMCH1-215ENST00000512632 DNPEPQ9ULA0 475 aa9.82□□□□□ -0.84
LIMCH1-215ENST00000512632 PCDHB4Q9Y5E5 795 aa9.82□□□□□ -0.84
LIMCH1-215ENST00000512632 WDR91A4D1P6 747 aa9.82□□□□□ -0.84
LIMCH1-215ENST00000512632 FAM47DPA6NHR8 397 aa9.82□□□□□ -0.84
LIMCH1-215ENST00000512632 WDR64B1ANS9 1081 aa9.82□□□□□ -0.84
LIMCH1-215ENST00000512632 ZNF862O60290 1169 aa9.82□□□□□ -0.84
LIMCH1-215ENST00000512632 HARSP12081 509 aaKnown RBP9.82□□□□□ -0.84
LIMCH1-215ENST00000512632 MAN1A1P33908 653 aa9.82□□□□□ -0.84
LIMCH1-215ENST00000512632 RPL7AP62424 266 aaKnown RBP9.82□□□□□ -0.84
LIMCH1-215ENST00000512632 STAT4Q14765 748 aa9.82□□□□□ -0.84
LIMCH1-215ENST00000512632 PCNX4Q63HM2 1172 aa9.82□□□□□ -0.84
LIMCH1-215ENST00000512632 SCARA3Q6AZY7 606 aa9.82□□□□□ -0.84
LIMCH1-215ENST00000512632 GPD1LQ8N335 351 aa9.82□□□□□ -0.84
LIMCH1-215ENST00000512632 TMC2Q8TDI7 906 aa9.82□□□□□ -0.84
LIMCH1-215ENST00000512632 C10orf88Q9H8K7 445 aa9.82□□□□□ -0.84
LIMCH1-215ENST00000512632 DONSONQ9NYP3 566 aa9.82□□□□□ -0.84
LIMCH1-215ENST00000512632 NEU2Q9Y3R4 380 aa9.82□□□□□ -0.84
LIMCH1-215ENST00000512632 BANF1O75531 89 aa9.81□□□□□ -0.84
LIMCH1-215ENST00000512632 TARSP26639 723 aaKnown RBP9.81□□□□□ -0.84
LIMCH1-215ENST00000512632 SLC1A1P43005 524 aa9.81□□□□□ -0.84
LIMCH1-215ENST00000512632 FKBP1AP62942 108 aaKnown RBP9.81□□□□□ -0.84
LIMCH1-215ENST00000512632 LACTBP83111 547 aaPredicted RBP9.81□□□□□ -0.84
LIMCH1-215ENST00000512632 CAV1Q03135 178 aa9.81□□□□□ -0.84
LIMCH1-215ENST00000512632 KLF1Q13351 362 aaPredicted RBP9.81□□□□□ -0.84
LIMCH1-215ENST00000512632 MTFR1Q15390 333 aa9.81□□□□□ -0.84
LIMCH1-215ENST00000512632 FAM182AQ5T1J6 154 aa9.81□□□□□ -0.84
LIMCH1-215ENST00000512632 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.81□□□□□ -0.84
LIMCH1-215ENST00000512632 MAML1Q92585 1016 aa9.81□□□□□ -0.84
LIMCH1-215ENST00000512632 L3MBTL3Q96JM7 780 aaPredicted RBP9.81□□□□□ -0.84
LIMCH1-215ENST00000512632 HAO1Q9UJM8 370 aa9.81□□□□□ -0.84
LIMCH1-215ENST00000512632 UMODL1Q5DID0 1318 aa9.81□□□□□ -0.84
LIMCH1-215ENST00000512632 CA4P22748 312 aa9.81□□□□□ -0.84
LIMCH1-215ENST00000512632 PTGER2P43116 358 aa9.81□□□□□ -0.84
LIMCH1-215ENST00000512632 NOP14P78316 857 aaKnown RBP9.81□□□□□ -0.84
LIMCH1-215ENST00000512632 GPS1Q13098 491 aa9.81□□□□□ -0.84
LIMCH1-215ENST00000512632 LIN9Q5TKA1 542 aa9.81□□□□□ -0.84
LIMCH1-215ENST00000512632 SWSAP1Q6NVH7 229 aa9.81□□□□□ -0.84
LIMCH1-215ENST00000512632 SYDE1Q6ZW31 735 aaPredicted RBP9.81□□□□□ -0.84
LIMCH1-215ENST00000512632 USP37Q86T82 979 aa9.81□□□□□ -0.84
LIMCH1-215ENST00000512632 OGFOD1Q8N543 542 aa9.81□□□□□ -0.84
LIMCH1-215ENST00000512632 ZBTB45Q96K62 511 aaPredicted RBP9.81□□□□□ -0.84
LIMCH1-215ENST00000512632 FAM81BQ96LP2 452 aa9.81□□□□□ -0.84
LIMCH1-215ENST00000512632 MYLK2Q9H1R3 596 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms