RNA–Protein interactions for RNA: ENST00000512620.5

CAST-238, Transcript of calpastatin, human

TSL 5

Gene CAST, Length 904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAST-238	ENST00000512620	SGCZ	Q96LD1	299 aa		4.23	□□□□□ -1.73
CAST-238	ENST00000512620	SCLT1	Q96NL6	688 aa		4.23	□□□□□ -1.73
CAST-238	ENST00000512620	SAMD11	Q96NU1	681 aa		4.23	□□□□□ -1.73
CAST-238	ENST00000512620	CDC5L	Q99459	802 aa	Known RBP	4.23	□□□□□ -1.73
CAST-238	ENST00000512620	PTPN18	Q99952	460 aa		4.23	□□□□□ -1.73
CAST-238	ENST00000512620	DPYSL5	Q9BPU6	564 aa		4.23	□□□□□ -1.73
CAST-238	ENST00000512620	C1orf43	Q9BWL3	253 aa		4.23	□□□□□ -1.73
CAST-238	ENST00000512620	BTBD1	Q9H0C5	482 aa		4.23	□□□□□ -1.73
CAST-238	ENST00000512620	EPC1	Q9H2F5	836 aa		4.23	□□□□□ -1.73
CAST-238	ENST00000512620	C12orf65	Q9H3J6	166 aa	Known RBP	4.23	□□□□□ -1.73
CAST-238	ENST00000512620	BCO1	Q9HAY6	547 aa		4.23	□□□□□ -1.73
CAST-238	ENST00000512620	PRDM16	Q9HAZ2	1276 aa		4.23	□□□□□ -1.73
CAST-238	ENST00000512620	ATP6V0A4	Q9HBG4	840 aa		4.23	□□□□□ -1.73
CAST-238	ENST00000512620	RRP7BP	Q9NSQ0	103 aa		4.23	□□□□□ -1.73
CAST-238	ENST00000512620	TRMT13	Q9NUP7	481 aa	Known RBP	4.23	□□□□□ -1.73
CAST-238	ENST00000512620	RTEL1	Q9NZ71	1219 aa		4.23	□□□□□ -1.73
CAST-238	ENST00000512620	FNIP2	Q9P278	1114 aa		4.23	□□□□□ -1.73
CAST-238	ENST00000512620	CORO2B	Q9UQ03	480 aa		4.23	□□□□□ -1.73
CAST-238	ENST00000512620	LRCH1	Q9Y2L9	728 aa		4.23	□□□□□ -1.73
CAST-238	ENST00000512620	ROCK1	Q13464	1354 aa		4.23	□□□□□ -1.73
CAST-238	ENST00000512620	KIF15	Q9NS87	1388 aa		4.23	□□□□□ -1.73
CAST-238	ENST00000512620	DNMBP	Q6XZF7	1577 aa		4.23	□□□□□ -1.73
CAST-238	ENST00000512620	UBE2QL1	A1L167	161 aa		4.22	□□□□□ -1.73
CAST-238	ENST00000512620	KLRG2	A4D1S0	409 aa	Predicted RBP	4.22	□□□□□ -1.73
CAST-238	ENST00000512620	MROH6	A6NGR9	719 aa		4.22	□□□□□ -1.73
CAST-238	ENST00000512620	MATN2	O00339	956 aa		4.22	□□□□□ -1.73
CAST-238	ENST00000512620	ARHGAP6	O43182	974 aa		4.22	□□□□□ -1.73
CAST-238	ENST00000512620	SGTA	O43765	313 aa		4.22	□□□□□ -1.73
CAST-238	ENST00000512620	B4GALT3	O60512	393 aa		4.22	□□□□□ -1.73
CAST-238	ENST00000512620	AHSG	P02765	367 aa		4.22	□□□□□ -1.73
CAST-238	ENST00000512620	CD1A	P06126	327 aa		4.22	□□□□□ -1.73
CAST-238	ENST00000512620	GYPE	P15421	78 aa		4.22	□□□□□ -1.73
CAST-238	ENST00000512620	SMARCA1	P28370	1054 aa		4.22	□□□□□ -1.73
CAST-238	ENST00000512620	GUCY1A2	P33402	732 aa		4.22	□□□□□ -1.73
CAST-238	ENST00000512620	HAL	P42357	657 aa		4.22	□□□□□ -1.73
CAST-238	ENST00000512620	SLURP1	P55000	103 aa		4.22	□□□□□ -1.73
CAST-238	ENST00000512620	CTSW	P56202	376 aa		4.22	□□□□□ -1.73
CAST-238	ENST00000512620	ADAM8	P78325	824 aa		4.22	□□□□□ -1.73
CAST-238	ENST00000512620	NKX6-1	P78426	367 aa	Predicted RBP	4.22	□□□□□ -1.73
CAST-238	ENST00000512620	ATP8B2	P98198	1209 aa		4.22	□□□□□ -1.73
CAST-238	ENST00000512620	APBA1	Q02410	837 aa		4.22	□□□□□ -1.73
CAST-238	ENST00000512620	TLE1	Q04724	770 aa		4.22	□□□□□ -1.73
CAST-238	ENST00000512620	MTM1	Q13496	603 aa		4.22	□□□□□ -1.73
CAST-238	ENST00000512620	PDCD2	Q16342	344 aa	Predicted RBP	4.22	□□□□□ -1.73
CAST-238	ENST00000512620	FLYWCH1	Q4VC44	716 aa		4.22	□□□□□ -1.73
CAST-238	ENST00000512620	ZMAT1	Q5H9K5	638 aa		4.22	□□□□□ -1.73
CAST-238	ENST00000512620	FAM26F	Q5R3K3	315 aa		4.22	□□□□□ -1.73
CAST-238	ENST00000512620	CIAPIN1	Q6FI81	312 aa		4.22	□□□□□ -1.73
CAST-238	ENST00000512620	TMED8	Q6PL24	325 aa	Predicted RBP	4.22	□□□□□ -1.73
CAST-238	ENST00000512620	APOA5	Q6Q788	366 aa		4.22	□□□□□ -1.73
CAST-238	ENST00000512620	XYLT1	Q86Y38	959 aa		4.22	□□□□□ -1.73
CAST-238	ENST00000512620	LINC01356	Q8N9X3	169 aa		4.22	□□□□□ -1.73
CAST-238	ENST00000512620	SLC35B2	Q8TB61	432 aa		4.22	□□□□□ -1.73
CAST-238	ENST00000512620	CFHR4	Q92496	578 aa		4.22	□□□□□ -1.73
CAST-238	ENST00000512620	TMEM176A	Q96HP8	235 aa		4.22	□□□□□ -1.73
CAST-238	ENST00000512620	LRRC37B	Q96QE4	947 aa		4.22	□□□□□ -1.73
CAST-238	ENST00000512620	C22orf23	Q9BZE7	217 aa		4.22	□□□□□ -1.73
CAST-238	ENST00000512620	LRRC27	Q9C0I9	530 aa		4.22	□□□□□ -1.73
CAST-238	ENST00000512620	MAF1	Q9H063	256 aa		4.22	□□□□□ -1.73
CAST-238	ENST00000512620	SLC6A15	Q9H2J7	730 aa		4.22	□□□□□ -1.73
CAST-238	ENST00000512620	RSAD1	Q9HA92	442 aa		4.22	□□□□□ -1.73
CAST-238	ENST00000512620	TMEM140	Q9NV12	185 aa		4.22	□□□□□ -1.73
CAST-238	ENST00000512620	PNPO	Q9NVS9	261 aa		4.22	□□□□□ -1.73
CAST-238	ENST00000512620	INSR	P06213	1382 aa		4.22	□□□□□ -1.73
CAST-238	ENST00000512620	USP47	Q96K76	1375 aa		4.22	□□□□□ -1.73
CAST-238	ENST00000512620	CROCC2	H7BZ55	1655 aa		4.22	□□□□□ -1.73
CAST-238	ENST00000512620	USP19	O94966	1318 aa		4.21	□□□□□ -1.73
CAST-238	ENST00000512620	NES	P48681	1621 aa		4.21	□□□□□ -1.73
CAST-238	ENST00000512620	TCRBV7S2A1N4T	A0A589	114 aa		4.21	□□□□□ -1.74
CAST-238	ENST00000512620	RHPN2P1	A8MT19	583 aa		4.21	□□□□□ -1.74
CAST-238	ENST00000512620	F2RL2	O00254	374 aa		4.21	□□□□□ -1.74
CAST-238	ENST00000512620	KIAA0391	O15091	583 aa	Known RBP	4.21	□□□□□ -1.74
CAST-238	ENST00000512620	KPNA5	O15131	536 aa		4.21	□□□□□ -1.74
CAST-238	ENST00000512620	FRS3	O43559	492 aa		4.21	□□□□□ -1.74
CAST-238	ENST00000512620	NBN	O60934	754 aa		4.21	□□□□□ -1.74
CAST-238	ENST00000512620	FRAT2	O75474	233 aa	Predicted RBP	4.21	□□□□□ -1.74
CAST-238	ENST00000512620	ARIH2	O95376	493 aa		4.21	□□□□□ -1.74
CAST-238	ENST00000512620	JUN	P05412	331 aa	Known RBP	4.21	□□□□□ -1.74
CAST-238	ENST00000512620	INHBB	P09529	407 aa		4.21	□□□□□ -1.74
CAST-238	ENST00000512620	TYR	P14679	529 aa		4.21	□□□□□ -1.74
CAST-238	ENST00000512620	TYRP1	P17643	537 aa		4.21	□□□□□ -1.74
CAST-238	ENST00000512620	CRHR1	P34998	444 aa		4.21	□□□□□ -1.74
CAST-238	ENST00000512620	PIK3CB	P42338	1070 aa		4.21	□□□□□ -1.74
CAST-238	ENST00000512620	WNT3A	P56704	352 aa		4.21	□□□□□ -1.74
CAST-238	ENST00000512620	RAP2B	P61225	183 aa		4.21	□□□□□ -1.74
CAST-238	ENST00000512620	FGL2	Q14314	439 aa		4.21	□□□□□ -1.74
CAST-238	ENST00000512620	ZNF568	Q3ZCX4	644 aa		4.21	□□□□□ -1.74
CAST-238	ENST00000512620	NT5DC1	Q5TFE4	455 aa		4.21	□□□□□ -1.74
CAST-238	ENST00000512620	ANKS6	Q68DC2	871 aa		4.21	□□□□□ -1.74
CAST-238	ENST00000512620	UBE3B	Q7Z3V4	1068 aa		4.21	□□□□□ -1.74
CAST-238	ENST00000512620	ADGRE4P	Q86SQ3	457 aa		4.21	□□□□□ -1.74
CAST-238	ENST00000512620	PPP1R3B	Q86XI6	285 aa		4.21	□□□□□ -1.74
CAST-238	ENST00000512620	ZNF354C	Q86Y25	554 aa		4.21	□□□□□ -1.74
CAST-238	ENST00000512620	CMTM4	Q8IZR5	234 aa		4.21	□□□□□ -1.74
CAST-238	ENST00000512620	OR2C3	Q8N628	320 aa		4.21	□□□□□ -1.74
CAST-238	ENST00000512620	PCSK9	Q8NBP7	692 aa	Known RBP	4.21	□□□□□ -1.74
CAST-238	ENST00000512620	POF1B	Q8WVV4	589 aa		4.21	□□□□□ -1.74
CAST-238	ENST00000512620	TNPO1	Q92973	898 aa	Known RBP	4.21	□□□□□ -1.74
CAST-238	ENST00000512620	FAM167A	Q96KS9	214 aa		4.21	□□□□□ -1.74
CAST-238	ENST00000512620	RIPOR3	Q96MK2	946 aa		4.21	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms