RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 RRN3P2A6NIE6 340 aa9.36□□□□□ -0.91
VCAN-208ENST00000512590 PGK2P07205 417 aa9.36□□□□□ -0.91
VCAN-208ENST00000512590 FGRP09769 529 aa9.36□□□□□ -0.91
VCAN-208ENST00000512590 ZFXP17010 805 aaPredicted RBP9.36□□□□□ -0.91
VCAN-208ENST00000512590 BIKQ13323 160 aa9.36□□□□□ -0.91
VCAN-208ENST00000512590 TXNRD1Q16881 649 aa9.36□□□□□ -0.91
VCAN-208ENST00000512590 AAK1Q2M2I8 961 aa9.36□□□□□ -0.91
VCAN-208ENST00000512590 CTXN3Q4LDR2 81 aa9.36□□□□□ -0.91
VCAN-208ENST00000512590 MACC1Q6ZN28 852 aa9.36□□□□□ -0.91
VCAN-208ENST00000512590 AGGF1Q8N302 714 aaeCLIP9.36□□□□□ -0.91
VCAN-208ENST00000512590 NKD1Q969G9 470 aa9.36□□□□□ -0.91
VCAN-208ENST00000512590 CYP4F11Q9HBI6 524 aa9.36□□□□□ -0.91
VCAN-208ENST00000512590 HECW1Q76N89 1606 aa9.36□□□□□ -0.91
VCAN-208ENST00000512590 WDR91A4D1P6 747 aa9.36□□□□□ -0.91
VCAN-208ENST00000512590 C19orf81C9J6K1 198 aa9.36□□□□□ -0.91
VCAN-208ENST00000512590 PACS2Q86VP3 889 aa9.36□□□□□ -0.91
VCAN-208ENST00000512590 ANKRD13CQ8N6S4 541 aa9.36□□□□□ -0.91
VCAN-208ENST00000512590 USP7Q93009 1102 aa9.36□□□□□ -0.91
VCAN-208ENST00000512590 SLC13A1Q9BZW2 595 aa9.36□□□□□ -0.91
VCAN-208ENST00000512590 LSG1Q9H089 658 aaKnown RBP9.36□□□□□ -0.91
VCAN-208ENST00000512590 INTS2Q9H0H0 1204 aaKnown RBP9.36□□□□□ -0.91
VCAN-208ENST00000512590 GCNT4Q9P109 453 aa9.36□□□□□ -0.91
VCAN-208ENST00000512590 UMPSP11172 480 aa9.36□□□□□ -0.91
VCAN-208ENST00000512590 PCNAP12004 261 aa9.36□□□□□ -0.91
VCAN-208ENST00000512590 CHRM3P20309 590 aa9.36□□□□□ -0.91
VCAN-208ENST00000512590 CHRNA5P30532 468 aa9.36□□□□□ -0.91
VCAN-208ENST00000512590 PRIM2P49643 509 aa9.36□□□□□ -0.91
VCAN-208ENST00000512590 STAT5BP51692 787 aa9.36□□□□□ -0.91
VCAN-208ENST00000512590 PRELPP51888 382 aa9.36□□□□□ -0.91
VCAN-208ENST00000512590 MMRN1Q13201 1228 aa9.36□□□□□ -0.91
VCAN-208ENST00000512590 IKBKEQ14164 716 aa9.36□□□□□ -0.91
VCAN-208ENST00000512590 DGKKQ5KSL6 1271 aa9.36□□□□□ -0.91
VCAN-208ENST00000512590 PID1Q7Z2X4 250 aa9.36□□□□□ -0.91
VCAN-208ENST00000512590 HORMAD1Q86X24 394 aa9.36□□□□□ -0.91
VCAN-208ENST00000512590 KRT84Q9NSB2 600 aa9.36□□□□□ -0.91
VCAN-208ENST00000512590 PCDHA4Q9UN74 947 aa9.36□□□□□ -0.91
VCAN-208ENST00000512590 FLT1P17948 1338 aa9.36□□□□□ -0.91
VCAN-208ENST00000512590 RPTORQ8N122 1335 aa9.36□□□□□ -0.91
VCAN-208ENST00000512590 TLL1O43897 1013 aa9.35□□□□□ -0.91
VCAN-208ENST00000512590 GGPS1O95749 300 aa9.35□□□□□ -0.91
VCAN-208ENST00000512590 HLA-DQA2P01906 255 aa9.35□□□□□ -0.91
VCAN-208ENST00000512590 PRKCBP05771 671 aa9.35□□□□□ -0.91
VCAN-208ENST00000512590 CLTBP09497 229 aa9.35□□□□□ -0.91
VCAN-208ENST00000512590 INPP5BP32019 993 aa9.35□□□□□ -0.91
VCAN-208ENST00000512590 XRCC4Q13426 336 aa9.35□□□□□ -0.91
VCAN-208ENST00000512590 TKFCQ3LXA3 575 aa9.35□□□□□ -0.91
VCAN-208ENST00000512590 CEP78Q5JTW2 689 aa9.35□□□□□ -0.91
VCAN-208ENST00000512590 TRMT11Q7Z4G4 463 aaKnown RBP9.35□□□□□ -0.91
VCAN-208ENST00000512590 IFNL1Q8IU54 200 aa9.35□□□□□ -0.91
VCAN-208ENST00000512590 SLC25A41Q8N5S1 370 aa9.35□□□□□ -0.91
VCAN-208ENST00000512590 RNF149Q8NC42 400 aa9.35□□□□□ -0.91
VCAN-208ENST00000512590 EDC3Q96F86 508 aaKnown RBP9.35□□□□□ -0.91
VCAN-208ENST00000512590 KLHL28Q9NXS3 571 aa9.35□□□□□ -0.91
VCAN-208ENST00000512590 SLC9A2Q9UBY0 812 aa9.35□□□□□ -0.91
VCAN-208ENST00000512590 C3orf70A6NLC5 250 aaPredicted RBP9.35□□□□□ -0.91
VCAN-208ENST00000512590 SLC27A2O14975 620 aa9.35□□□□□ -0.91
VCAN-208ENST00000512590 GFPT2O94808 682 aa9.35□□□□□ -0.91
VCAN-208ENST00000512590 GNSP15586 552 aa9.35□□□□□ -0.91
VCAN-208ENST00000512590 GNA13Q14344 377 aa9.35□□□□□ -0.91
VCAN-208ENST00000512590 LLGL1Q15334 1064 aa9.35□□□□□ -0.91
VCAN-208ENST00000512590 SYCP2LQ5T4T6 812 aa9.35□□□□□ -0.91
VCAN-208ENST00000512590 PODNQ7Z5L7 613 aa9.35□□□□□ -0.91
VCAN-208ENST00000512590 SLC44A2Q8IWA5 706 aaPredicted RBP9.35□□□□□ -0.91
VCAN-208ENST00000512590 WNK4Q96J92 1243 aa9.35□□□□□ -0.91
VCAN-208ENST00000512590 SPATA9Q9BWV2 254 aa9.35□□□□□ -0.91
VCAN-208ENST00000512590 SIK3Q9Y2K2 1263 aa9.35□□□□□ -0.91
VCAN-208ENST00000512590 SOS1Q07889 1333 aaPredicted RBP9.35□□□□□ -0.91
VCAN-208ENST00000512590 AVILO75366 819 aa9.35□□□□□ -0.91
VCAN-208ENST00000512590 KRT37O76014 449 aa9.35□□□□□ -0.91
VCAN-208ENST00000512590 KRT38O76015 456 aa9.35□□□□□ -0.91
VCAN-208ENST00000512590 IL6STP40189 918 aaPredicted RBP9.35□□□□□ -0.91
VCAN-208ENST00000512590 COG2Q14746 738 aa9.35□□□□□ -0.91
VCAN-208ENST00000512590 TMEM270Q6UE05 265 aa9.35□□□□□ -0.91
VCAN-208ENST00000512590 NECAB2Q7Z6G3 386 aa9.35□□□□□ -0.91
VCAN-208ENST00000512590 C7orf61Q8IZ16 206 aa9.35□□□□□ -0.91
VCAN-208ENST00000512590 ST13P5Q8NFI4 369 aaPredicted RBP9.35□□□□□ -0.91
VCAN-208ENST00000512590 RHBGQ9H310 441 aa9.35□□□□□ -0.91
VCAN-208ENST00000512590 SPEF1Q9Y4P9 236 aa9.35□□□□□ -0.91
VCAN-208ENST00000512590 PNMA6FA0A0J9YX94 578 aa9.35□□□□□ -0.91
VCAN-208ENST00000512590 LAD1O00515 517 aa9.35□□□□□ -0.91
VCAN-208ENST00000512590 CES2O00748 559 aa9.35□□□□□ -0.91
VCAN-208ENST00000512590 CLASP2O75122 1294 aaKnown RBP9.35□□□□□ -0.91
VCAN-208ENST00000512590 KLHL18O94889 574 aa9.35□□□□□ -0.91
VCAN-208ENST00000512590 ALDH2P05091 517 aa9.35□□□□□ -0.91
VCAN-208ENST00000512590 CFIP05156 583 aa9.35□□□□□ -0.91
VCAN-208ENST00000512590 CDH2P19022 906 aaPredicted RBP9.35□□□□□ -0.91
VCAN-208ENST00000512590 RPL21P46778 160 aaKnown RBP9.35□□□□□ -0.91
VCAN-208ENST00000512590 BDH1Q02338 343 aa9.35□□□□□ -0.91
VCAN-208ENST00000512590 ACOX1Q15067 660 aa9.35□□□□□ -0.91
VCAN-208ENST00000512590 UGT3A1Q6NUS8 523 aa9.35□□□□□ -0.91
VCAN-208ENST00000512590 P4HA3Q7Z4N8 544 aa9.35□□□□□ -0.91
VCAN-208ENST00000512590 FANCBQ8NB91 859 aa9.35□□□□□ -0.91
VCAN-208ENST00000512590 HCAR2Q8TDS4 363 aa9.35□□□□□ -0.91
VCAN-208ENST00000512590 FBXO32Q969P5 355 aa9.35□□□□□ -0.91
VCAN-208ENST00000512590 ZSWIM6Q9HCJ5 1215 aa9.35□□□□□ -0.91
VCAN-208ENST00000512590 WWOXQ9NZC7 414 aa9.35□□□□□ -0.91
VCAN-208ENST00000512590 CPA4Q9UI42 421 aa9.35□□□□□ -0.91
VCAN-208ENST00000512590 TPX2Q9ULW0 747 aaKnown RBP9.35□□□□□ -0.91
VCAN-208ENST00000512590 AXIN2Q9Y2T1 843 aa9.35□□□□□ -0.91
VCAN-208ENST00000512590 MAGEB2O15479 319 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms