RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 FKBP9O95302 570 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 NR3C1P04150 777 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 CDH2P19022 906 aaPredicted RBP6.07□□□□□ -1.44
USP38-203ENST00000511739 ATP6V1C1P21283 382 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 IL10P22301 178 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 MRPS15P82914 257 aaKnown RBP6.07□□□□□ -1.44
USP38-203ENST00000511739 KLRC3Q07444 240 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 C2orf54Q08AI8 447 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 FKBP9P1Q75LS8 142 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 KRT77Q7Z794 578 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 ST13P4Q8IZP2 240 aaPredicted RBP6.07□□□□□ -1.44
USP38-203ENST00000511739 VPS37AQ8NEZ2 397 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 GPRC5AQ8NFJ5 357 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 KCNB2Q92953 911 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 SAAL1Q96ER3 474 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 TSPAN17Q96FV3 270 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 BRIP1Q9BX63 1249 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 PITPNM3Q9BZ71 974 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 HERC5Q9UII4 1024 aaKnown RBP6.07□□□□□ -1.44
USP38-203ENST00000511739 CRLS1Q9UJA2 301 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 CAB39Q9Y376 341 aaPredicted RBP6.07□□□□□ -1.44
USP38-203ENST00000511739 SYNGAP1Q96PV0 1343 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 RASA4BC9J798 803 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 ANGPT2O15123 496 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 RASA4O43374 803 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 KRT14P02533 472 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 URODP06132 367 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 CYP2C9P11712 490 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 HIRAP54198 1017 aaPredicted RBP6.07□□□□□ -1.44
USP38-203ENST00000511739 ATN1P54259 1190 aaPredicted RBP6.07□□□□□ -1.44
USP38-203ENST00000511739 MRPL28Q13084 256 aaKnown RBP6.07□□□□□ -1.44
USP38-203ENST00000511739 BFSP2Q13515 415 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 TOB2Q14106 344 aaPredicted RBP6.07□□□□□ -1.44
USP38-203ENST00000511739 POLD3Q15054 466 aaPredicted RBP6.07□□□□□ -1.44
USP38-203ENST00000511739 TRADDQ15628 312 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 PAN2Q504Q3 1202 aaKnown RBP6.07□□□□□ -1.44
USP38-203ENST00000511739 USP39Q53GS9 565 aaKnown RBP6.07□□□□□ -1.44
USP38-203ENST00000511739 BEND6Q5SZJ8 279 aaPredicted RBP6.07□□□□□ -1.44
USP38-203ENST00000511739 LRRC8BQ6P9F7 803 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 FAM47EQ6ZV65 393 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 NBPF15Q8N660 670 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 C1orf131Q8NDD1 294 aaKnown RBP6.07□□□□□ -1.44
USP38-203ENST00000511739 MYRIPQ8NFW9 859 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 AGAP3Q96P47 875 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 STRBPQ96SI9 672 aaKnown RBP6.07□□□□□ -1.44
USP38-203ENST00000511739 PRPF18Q99633 342 aaKnown RBP6.07□□□□□ -1.44
USP38-203ENST00000511739 TMEM245Q9H330 911 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 ZSWIM5Q9P217 1185 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 FBXO10Q9UK96 956 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 C3P01024 1663 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 POTEB3A0JP26 581 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 C19orf81C9J6K1 198 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 GOLGA8RI6L899 631 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 GYG2O15488 501 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 WDR47O94967 919 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 RPSAP08865 295 aaKnown RBP6.07□□□□□ -1.44
USP38-203ENST00000511739 MAPK9P45984 424 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 NEK2P51955 445 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 WDR72Q3MJ13 1102 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 NUGGCQ68CJ6 796 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 GRAMD4Q6IC98 578 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 POTEBQ6S5H4 581 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 TRIM72Q6ZMU5 477 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 DDX42Q86XP3 938 aaKnown RBP eCLIP6.07□□□□□ -1.44
USP38-203ENST00000511739 AHCYL2Q96HN2 611 aaKnown RBP6.07□□□□□ -1.44
USP38-203ENST00000511739 APOL5Q9BWW9 433 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 TEX13BQ9BXU2 312 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 SLC13A1Q9BZW2 595 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 ZCWPW1Q9H0M4 648 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 EXO5Q9H790 373 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 RPS6KB2Q9UBS0 482 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 A0A1B0GW55 424 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 F8W810 466 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 H7C4K7 107 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 PSMD12O00232 456 aaPredicted RBP6.06□□□□□ -1.44
USP38-203ENST00000511739 TEX28O15482 410 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 HOXA2O43364 376 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 TOMM70O94826 608 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 APOA1P02647 267 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 CSF1RP07333 972 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 PDGFRBP09619 1106 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 DUX4L2P0CJ85 424 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 DUX4L3P0CJ86 424 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 DUX4L4P0CJ87 422 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 DUX4L5P0CJ88 424 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 DUX4L6P0CJ89 424 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 DUX4L7P0CJ90 424 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 GUCY1A2P33402 732 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 GRK3P35626 688 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 ANXA11P50995 505 aaKnown RBP6.06□□□□□ -1.44
USP38-203ENST00000511739 TBL3Q12788 808 aaKnown RBP6.06□□□□□ -1.44
USP38-203ENST00000511739 STILQ15468 1287 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 ZRANB3Q5FWF4 1079 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 SNX30Q5VWJ9 437 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 C16orf87Q6PH81 154 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 MTHFD1LQ6UB35 978 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 RGL4Q8IZJ4 473 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 ATP11CQ8NB49 1132 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 LINC00301Q8NCQ3 95 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 THOC1Q96FV9 657 aaKnown RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms