RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 ZNF667Q5HYK9 610 aa16.3■□□□□ 0.2
SCLT1-209ENST00000511426 FRMPD3Q5JV73 1810 aa16.3■□□□□ 0.2
SCLT1-209ENST00000511426 UBXN11Q5T124 520 aa16.3■□□□□ 0.2
SCLT1-209ENST00000511426 GLYCTKQ8IVS8 523 aa16.3■□□□□ 0.2
SCLT1-209ENST00000511426 LRRC52Q8N7C0 313 aa16.3■□□□□ 0.2
SCLT1-209ENST00000511426 UBR7Q8N806 425 aa16.3■□□□□ 0.2
SCLT1-209ENST00000511426 LNX1Q8TBB1 728 aaPredicted RBP16.3■□□□□ 0.2
SCLT1-209ENST00000511426 NAPGQ99747 312 aaPredicted RBP16.3■□□□□ 0.2
SCLT1-209ENST00000511426 EIF2AQ9BY44 585 aaKnown RBP16.3■□□□□ 0.2
SCLT1-209ENST00000511426 ANK1P16157 1881 aa16.3■□□□□ 0.2
SCLT1-209ENST00000511426 ANKRD62A6NC57 917 aa16.3■□□□□ 0.2
SCLT1-209ENST00000511426 RCCD1A6NED2 376 aa16.3■□□□□ 0.2
SCLT1-209ENST00000511426 MEFVO15553 781 aaPredicted RBP16.3■□□□□ 0.2
SCLT1-209ENST00000511426 RECQL4O94761 1208 aa16.3■□□□□ 0.2
SCLT1-209ENST00000511426 TMEM253P0C7T8 217 aa16.3■□□□□ 0.2
SCLT1-209ENST00000511426 THPOP40225 353 aa16.3■□□□□ 0.2
SCLT1-209ENST00000511426 ZNF132P52740 706 aa16.3■□□□□ 0.2
SCLT1-209ENST00000511426 TCEAL1Q15170 157 aa16.3■□□□□ 0.2
SCLT1-209ENST00000511426 TRIM71Q2Q1W2 868 aaKnown RBP16.3■□□□□ 0.2
SCLT1-209ENST00000511426 TWF2Q6IBS0 349 aaKnown RBP16.3■□□□□ 0.2
SCLT1-209ENST00000511426 OLIG1Q8TAK6 271 aa16.3■□□□□ 0.2
SCLT1-209ENST00000511426 CXorf38Q8TB03 319 aa16.3■□□□□ 0.2
SCLT1-209ENST00000511426 CAGE1Q8TC20 777 aa16.3■□□□□ 0.2
SCLT1-209ENST00000511426 PPP1R13LQ8WUF5 828 aa16.3■□□□□ 0.2
SCLT1-209ENST00000511426 KIF12Q96FN5 646 aa16.3■□□□□ 0.2
SCLT1-209ENST00000511426 WDR24Q96S15 920 aa16.3■□□□□ 0.2
SCLT1-209ENST00000511426 BCO2Q9BYV7 579 aa16.3■□□□□ 0.2
SCLT1-209ENST00000511426 ISCUQ9H1K1 167 aa16.3■□□□□ 0.2
SCLT1-209ENST00000511426 DPP3Q9NY33 737 aa16.3■□□□□ 0.2
SCLT1-209ENST00000511426 SNTG2Q9NY99 539 aa16.3■□□□□ 0.2
SCLT1-209ENST00000511426 SIX4Q9UIU6 781 aa16.3■□□□□ 0.2
SCLT1-209ENST00000511426 ARVCFO00192 962 aa16.29■□□□□ 0.2
SCLT1-209ENST00000511426 RTN2O75298 545 aa16.29■□□□□ 0.2
SCLT1-209ENST00000511426 ITGB3P05106 788 aa16.29■□□□□ 0.2
SCLT1-209ENST00000511426 ZSCAN20P17040 1043 aaPredicted RBP16.29■□□□□ 0.2
SCLT1-209ENST00000511426 ATF7P17544 494 aaPredicted RBP16.29■□□□□ 0.2
SCLT1-209ENST00000511426 MYO1EQ12965 1108 aa16.29■□□□□ 0.2
SCLT1-209ENST00000511426 FBXO47Q5MNV8 452 aa16.29■□□□□ 0.2
SCLT1-209ENST00000511426 RPUSD2Q8IZ73 545 aaKnown RBP16.29■□□□□ 0.2
SCLT1-209ENST00000511426 SLC35F6Q8N357 371 aa16.29■□□□□ 0.2
SCLT1-209ENST00000511426 U2AF1L4Q8WU68 220 aaKnown RBP16.29■□□□□ 0.2
SCLT1-209ENST00000511426 CTNNBL1Q8WYA6 563 aaPredicted RBP16.29■□□□□ 0.2
SCLT1-209ENST00000511426 DDX1Q92499 740 aaKnown RBP16.29■□□□□ 0.2
SCLT1-209ENST00000511426 NXF3Q9H4D5 531 aaKnown RBP16.29■□□□□ 0.2
SCLT1-209ENST00000511426 TSKSQ9UJT2 592 aa16.29■□□□□ 0.2
SCLT1-209ENST00000511426 ST3GAL5Q9UNP4 418 aa16.29■□□□□ 0.2
SCLT1-209ENST00000511426 JRKLQ9Y4A0 524 aa16.29■□□□□ 0.2
SCLT1-209ENST00000511426 IPPQ9Y573 584 aa16.29■□□□□ 0.2
SCLT1-209ENST00000511426 A0A0U1RQJ8 604 aa16.28■□□□□ 0.2
SCLT1-209ENST00000511426 ZNF623O75123 536 aa16.28■□□□□ 0.2
SCLT1-209ENST00000511426 SGPL1O95470 568 aa16.28■□□□□ 0.2
SCLT1-209ENST00000511426 PNPLA4P41247 253 aa16.28■□□□□ 0.2
SCLT1-209ENST00000511426 SPOPLQ6IQ16 392 aa16.28■□□□□ 0.2
SCLT1-209ENST00000511426 NOP9Q86U38 636 aaKnown RBP16.28■□□□□ 0.2
SCLT1-209ENST00000511426 SLC47A2Q86VL8 602 aa16.28■□□□□ 0.2
SCLT1-209ENST00000511426 RHOT2Q8IXI1 618 aa16.28■□□□□ 0.2
SCLT1-209ENST00000511426 ATRIPQ8WXE1 791 aa16.28■□□□□ 0.2
SCLT1-209ENST00000511426 WNT8BQ93098 351 aa16.28■□□□□ 0.2
SCLT1-209ENST00000511426 TRIM11Q96F44 468 aa16.28■□□□□ 0.2
SCLT1-209ENST00000511426 ERVK-5Q9HDB9 667 aa16.28■□□□□ 0.2
SCLT1-209ENST00000511426 OGDHLQ9ULD0 1010 aa16.28■□□□□ 0.2
SCLT1-209ENST00000511426 PCDHB4Q9Y5E5 795 aa16.28■□□□□ 0.2
SCLT1-209ENST00000511426 PCDHGC5Q9Y5F6 944 aa16.28■□□□□ 0.2
SCLT1-209ENST00000511426 NCANO14594 1321 aa16.28■□□□□ 0.2
SCLT1-209ENST00000511426 CLSTN1O94985 981 aa16.27■□□□□ 0.2
SCLT1-209ENST00000511426 KRT19P08727 400 aa16.27■□□□□ 0.2
SCLT1-209ENST00000511426 CAPN2P17655 700 aa16.27■□□□□ 0.2
SCLT1-209ENST00000511426 ASPAP45381 313 aa16.27■□□□□ 0.2
SCLT1-209ENST00000511426 HADHBP55084 474 aaKnown RBP16.27■□□□□ 0.2
SCLT1-209ENST00000511426 FMO1Q01740 532 aa16.27■□□□□ 0.2
SCLT1-209ENST00000511426 PAK2Q13177 524 aa16.27■□□□□ 0.2
SCLT1-209ENST00000511426 TMEM270Q6UE05 265 aa16.27■□□□□ 0.2
SCLT1-209ENST00000511426 RBBP8NLQ8NC74 664 aaPredicted RBP16.27■□□□□ 0.2
SCLT1-209ENST00000511426 MYRIPQ8NFW9 859 aa16.27■□□□□ 0.2
SCLT1-209ENST00000511426 RFFLQ8WZ73 363 aa16.27■□□□□ 0.2
SCLT1-209ENST00000511426 ARID3AQ99856 593 aa16.27■□□□□ 0.2
SCLT1-209ENST00000511426 IRX2Q9BZI1 471 aaPredicted RBP16.27■□□□□ 0.2
SCLT1-209ENST00000511426 UBN1Q9NPG3 1134 aa16.27■□□□□ 0.2
SCLT1-209ENST00000511426 FAM105AQ9NUU6 356 aa16.27■□□□□ 0.2
SCLT1-209ENST00000511426 SLC38A7Q9NVC3 462 aa16.27■□□□□ 0.2
SCLT1-209ENST00000511426 TRIM10Q9UDY6 481 aa16.27■□□□□ 0.2
SCLT1-209ENST00000511426 GIT1Q9Y2X7 761 aa16.27■□□□□ 0.2
SCLT1-209ENST00000511426 TRIP12Q14669 1992 aaPredicted RBP16.27■□□□□ 0.2
SCLT1-209ENST00000511426 MACROD2A1Z1Q3 448 aa16.27■□□□□ 0.19
SCLT1-209ENST00000511426 TLR3O15455 904 aaKnown RBP16.27■□□□□ 0.19
SCLT1-209ENST00000511426 PAEPP09466 180 aa16.27■□□□□ 0.19
SCLT1-209ENST00000511426 CTSHP09668 335 aa16.27■□□□□ 0.19
SCLT1-209ENST00000511426 POLR2BP30876 1174 aaKnown RBP16.27■□□□□ 0.19
SCLT1-209ENST00000511426 GTF2F1P35269 517 aaKnown RBP eCLIP16.27■□□□□ 0.19
SCLT1-209ENST00000511426 HPDLQ96IR7 371 aa16.27■□□□□ 0.19
SCLT1-209ENST00000511426 ZNF560Q96MR9 790 aa16.27■□□□□ 0.19
SCLT1-209ENST00000511426 DNAI2Q9GZS0 605 aa16.27■□□□□ 0.19
SCLT1-209ENST00000511426 CISHQ9NSE2 258 aa16.27■□□□□ 0.19
SCLT1-209ENST00000511426 TRMT13Q9NUP7 481 aaKnown RBP16.27■□□□□ 0.19
SCLT1-209ENST00000511426 SEPT11Q9NVA2 429 aaKnown RBP16.27■□□□□ 0.19
SCLT1-209ENST00000511426 URI1O94763 535 aaPredicted RBP16.26■□□□□ 0.19
SCLT1-209ENST00000511426 MYBL1P10243 752 aa16.26■□□□□ 0.19
SCLT1-209ENST00000511426 PRLRP16471 622 aa16.26■□□□□ 0.19
SCLT1-209ENST00000511426 CHRNB2P17787 502 aa16.26■□□□□ 0.19
SCLT1-209ENST00000511426 PAX3P23760 479 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms