RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 MRPL46Q9H2W6 279 aaKnown RBP4.26□□□□□ -1.73
TRAPPC11-207ENST00000511409 DEF6Q9H4E7 631 aa4.26□□□□□ -1.73
TRAPPC11-207ENST00000511409 BRD9Q9H8M2 597 aa4.26□□□□□ -1.73
TRAPPC11-207ENST00000511409 DDX21Q9NR30 783 aaKnown RBP eCLIP4.26□□□□□ -1.73
TRAPPC11-207ENST00000511409 FBXO34Q9NWN3 711 aa4.26□□□□□ -1.73
TRAPPC11-207ENST00000511409 SIDT1Q9NXL6 827 aaKnown RBP4.26□□□□□ -1.73
TRAPPC11-207ENST00000511409 TPCN1Q9ULQ1 816 aa4.26□□□□□ -1.73
TRAPPC11-207ENST00000511409 CDHR4A6H8M9 788 aa4.25□□□□□ -1.73
TRAPPC11-207ENST00000511409 C1QTNF3-AMACRE9PGA6 284 aa4.25□□□□□ -1.73
TRAPPC11-207ENST00000511409 PMM2O15305 246 aa4.25□□□□□ -1.73
TRAPPC11-207ENST00000511409 HAUS5O94927 633 aa4.25□□□□□ -1.73
TRAPPC11-207ENST00000511409 IFIT2P09913 472 aaKnown RBP4.25□□□□□ -1.73
TRAPPC11-207ENST00000511409 PHKG2P15735 406 aa4.25□□□□□ -1.73
TRAPPC11-207ENST00000511409 SLC6A2P23975 617 aa4.25□□□□□ -1.73
TRAPPC11-207ENST00000511409 HIBADHP31937 336 aaKnown RBP4.25□□□□□ -1.73
TRAPPC11-207ENST00000511409 PSMC1P62191 440 aaKnown RBP4.25□□□□□ -1.73
TRAPPC11-207ENST00000511409 EXOSC9Q06265 439 aaKnown RBP4.25□□□□□ -1.73
TRAPPC11-207ENST00000511409 UTP14CQ5TAP6 766 aaKnown RBP4.25□□□□□ -1.73
TRAPPC11-207ENST00000511409 ZNF585AQ6P3V2 769 aa4.25□□□□□ -1.73
TRAPPC11-207ENST00000511409 FAM90A1Q86YD7 464 aa4.25□□□□□ -1.73
TRAPPC11-207ENST00000511409 FAM43AQ8N2R8 423 aa4.25□□□□□ -1.73
TRAPPC11-207ENST00000511409 ZNF808Q8N4W9 903 aaPredicted RBP4.25□□□□□ -1.73
TRAPPC11-207ENST00000511409 FITM2Q8N6M3 262 aa4.25□□□□□ -1.73
TRAPPC11-207ENST00000511409 CHST13Q8NET6 341 aa4.25□□□□□ -1.73
TRAPPC11-207ENST00000511409 IL17RDQ8NFM7 739 aa4.25□□□□□ -1.73
TRAPPC11-207ENST00000511409 OR10H5Q8NGA6 315 aa4.25□□□□□ -1.73
TRAPPC11-207ENST00000511409 TBC1D15Q8TC07 691 aa4.25□□□□□ -1.73
TRAPPC11-207ENST00000511409 Q8TCH9 128 aa4.25□□□□□ -1.73
TRAPPC11-207ENST00000511409 PARD3BQ8TEW8 1205 aa4.25□□□□□ -1.73
TRAPPC11-207ENST00000511409 GPR87Q9BY21 358 aa4.25□□□□□ -1.73
TRAPPC11-207ENST00000511409 KRTAP3-1Q9BYR8 98 aa4.25□□□□□ -1.73
TRAPPC11-207ENST00000511409 RSAD1Q9HA92 442 aa4.25□□□□□ -1.73
TRAPPC11-207ENST00000511409 PIH1D1Q9NWS0 290 aaKnown RBP4.25□□□□□ -1.73
TRAPPC11-207ENST00000511409 ZNF785A8K8V0 405 aa4.24□□□□□ -1.73
TRAPPC11-207ENST00000511409 PATE3B3GLJ2 98 aa4.24□□□□□ -1.73
TRAPPC11-207ENST00000511409 CYP27B1O15528 508 aa4.24□□□□□ -1.73
TRAPPC11-207ENST00000511409 PEX14O75381 377 aa4.24□□□□□ -1.73
TRAPPC11-207ENST00000511409 SLC43A1O75387 559 aa4.24□□□□□ -1.73
TRAPPC11-207ENST00000511409 AGFG2O95081 481 aa4.24□□□□□ -1.73
TRAPPC11-207ENST00000511409 GNAI2P04899 355 aa4.24□□□□□ -1.73
TRAPPC11-207ENST00000511409 GJB1P08034 283 aa4.24□□□□□ -1.73
TRAPPC11-207ENST00000511409 BRAFP15056 766 aa4.24□□□□□ -1.73
TRAPPC11-207ENST00000511409 HDCP19113 662 aa4.24□□□□□ -1.73
TRAPPC11-207ENST00000511409 SLC6A4P31645 630 aa4.24□□□□□ -1.73
TRAPPC11-207ENST00000511409 CHN2P52757 468 aa4.24□□□□□ -1.73
TRAPPC11-207ENST00000511409 SOX8P57073 446 aa4.24□□□□□ -1.73
TRAPPC11-207ENST00000511409 SEMA5AQ13591 1074 aa4.24□□□□□ -1.73
TRAPPC11-207ENST00000511409 CNGB1Q14028 1251 aaPredicted RBP4.24□□□□□ -1.73
TRAPPC11-207ENST00000511409 UBE4AQ14139 1066 aa4.24□□□□□ -1.73
TRAPPC11-207ENST00000511409 ICAM4Q14773 271 aa4.24□□□□□ -1.73
TRAPPC11-207ENST00000511409 POLD3Q15054 466 aaPredicted RBP4.24□□□□□ -1.73
TRAPPC11-207ENST00000511409 VPS72Q15906 364 aa4.24□□□□□ -1.73
TRAPPC11-207ENST00000511409 SPTY2D1Q68D10 685 aaPredicted RBP4.24□□□□□ -1.73
TRAPPC11-207ENST00000511409 CYB5RLQ6IPT4 315 aa4.24□□□□□ -1.73
TRAPPC11-207ENST00000511409 APOA5Q6Q788 366 aa4.24□□□□□ -1.73
TRAPPC11-207ENST00000511409 ZNF365Q70YC5 407 aa4.24□□□□□ -1.73
TRAPPC11-207ENST00000511409 GPRIN1Q7Z2K8 1008 aa4.24□□□□□ -1.73
TRAPPC11-207ENST00000511409 SLC17A8Q8NDX2 589 aa4.24□□□□□ -1.73
TRAPPC11-207ENST00000511409 OR52N2Q8NGI0 321 aa4.24□□□□□ -1.73
TRAPPC11-207ENST00000511409 ADOQ96SZ5 270 aa4.24□□□□□ -1.73
TRAPPC11-207ENST00000511409 MPHOSPH6Q99547 160 aaKnown RBP4.24□□□□□ -1.73
TRAPPC11-207ENST00000511409 MNTQ99583 582 aa4.24□□□□□ -1.73
TRAPPC11-207ENST00000511409 C22orf23Q9BZE7 217 aa4.24□□□□□ -1.73
TRAPPC11-207ENST00000511409 LRRC27Q9C0I9 530 aa4.24□□□□□ -1.73
TRAPPC11-207ENST00000511409 REXO4Q9GZR2 422 aaKnown RBP4.24□□□□□ -1.73
TRAPPC11-207ENST00000511409 ATP6V0A4Q9HBG4 840 aa4.24□□□□□ -1.73
TRAPPC11-207ENST00000511409 KIAA1586Q9HCI6 787 aa4.24□□□□□ -1.73
TRAPPC11-207ENST00000511409 CHST12Q9NRB3 414 aa4.24□□□□□ -1.73
TRAPPC11-207ENST00000511409 SMPD4Q9NXE4 827 aa4.24□□□□□ -1.73
TRAPPC11-207ENST00000511409 JKAMPQ9P055 326 aa4.24□□□□□ -1.73
TRAPPC11-207ENST00000511409 CFAP97Q9P2B7 532 aa4.24□□□□□ -1.73
TRAPPC11-207ENST00000511409 EIF2B4Q9UI10 523 aaKnown RBP4.24□□□□□ -1.73
TRAPPC11-207ENST00000511409 ST6GALNAC2Q9UJ37 374 aa4.24□□□□□ -1.73
TRAPPC11-207ENST00000511409 OGDHLQ9ULD0 1010 aa4.24□□□□□ -1.73
TRAPPC11-207ENST00000511409 SLC45A2Q9UMX9 530 aa4.24□□□□□ -1.73
TRAPPC11-207ENST00000511409 TCAF1Q9Y4C2 921 aa4.24□□□□□ -1.73
TRAPPC11-207ENST00000511409 SNX13Q9Y5W8 968 aa4.24□□□□□ -1.73
TRAPPC11-207ENST00000511409 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.24□□□□□ -1.73
TRAPPC11-207ENST00000511409 ANO9A1A5B4 782 aa4.23□□□□□ -1.73
TRAPPC11-207ENST00000511409 DRGXA6NNA5 263 aa4.23□□□□□ -1.73
TRAPPC11-207ENST00000511409 GOLGA6L6A8MZA4 724 aa4.23□□□□□ -1.73
TRAPPC11-207ENST00000511409 MATN4O95460 622 aa4.23□□□□□ -1.73
TRAPPC11-207ENST00000511409 NPR1P16066 1061 aa4.23□□□□□ -1.73
TRAPPC11-207ENST00000511409 MAN2A2P49641 1150 aa4.23□□□□□ -1.73
TRAPPC11-207ENST00000511409 ADAM17P78536 824 aa4.23□□□□□ -1.73
TRAPPC11-207ENST00000511409 NHLH2Q02577 135 aa4.23□□□□□ -1.73
TRAPPC11-207ENST00000511409 OS9Q13438 667 aaPredicted RBP4.23□□□□□ -1.73
TRAPPC11-207ENST00000511409 DCAF17Q5H9S7 520 aaPredicted RBP4.23□□□□□ -1.73
TRAPPC11-207ENST00000511409 DRICH1Q6PGQ1 229 aaPredicted RBP4.23□□□□□ -1.73
TRAPPC11-207ENST00000511409 Q6ZRM9 215 aa4.23□□□□□ -1.73
TRAPPC11-207ENST00000511409 IL31RAQ8NI17 732 aa4.23□□□□□ -1.73
TRAPPC11-207ENST00000511409 P2RX7Q99572 595 aaKnown RBP4.23□□□□□ -1.73
TRAPPC11-207ENST00000511409 IMPG2Q9BZV3 1241 aa4.23□□□□□ -1.73
TRAPPC11-207ENST00000511409 NUP62CLQ9H1M0 184 aa4.23□□□□□ -1.73
TRAPPC11-207ENST00000511409 ZNF287Q9HBT7 754 aa4.23□□□□□ -1.73
TRAPPC11-207ENST00000511409 CD248Q9HCU0 757 aa4.23□□□□□ -1.73
TRAPPC11-207ENST00000511409 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.23□□□□□ -1.73
TRAPPC11-207ENST00000511409 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.23□□□□□ -1.73
TRAPPC11-207ENST00000511409 SRRDQ9UH36 339 aa4.23□□□□□ -1.73
TRAPPC11-207ENST00000511409 ZDHHC8Q9ULC8 765 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms