RNA–Protein interactions for RNA: ENST00000511313.5

POLR2J3-215, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best) BASIC

Gene POLR2J3, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-215ENST00000511313 C18orf25Q96B23 403 aaPredicted RBP10.29□□□□□ -0.76
POLR2J3-215ENST00000511313 MRFAP1L1Q96HT8 127 aa10.29□□□□□ -0.76
POLR2J3-215ENST00000511313 C8orf33Q9H7E9 229 aaPredicted RBP10.29□□□□□ -0.76
POLR2J3-215ENST00000511313 TXNRD2Q9NNW7 524 aa10.29□□□□□ -0.76
POLR2J3-215ENST00000511313 HSPBP1Q9NZL4 362 aa10.29□□□□□ -0.76
POLR2J3-215ENST00000511313 CASZ1Q86V15 1759 aa10.29□□□□□ -0.76
POLR2J3-215ENST00000511313 SOBPA7XYQ1 873 aa10.29□□□□□ -0.76
POLR2J3-215ENST00000511313 RIOK3O14730 519 aaKnown RBP10.29□□□□□ -0.76
POLR2J3-215ENST00000511313 PSMD3O43242 534 aa10.29□□□□□ -0.76
POLR2J3-215ENST00000511313 MBL2P11226 248 aaPredicted RBP10.29□□□□□ -0.76
POLR2J3-215ENST00000511313 MAN1A1P33908 653 aa10.29□□□□□ -0.76
POLR2J3-215ENST00000511313 BMPR1AP36894 532 aa10.29□□□□□ -0.76
POLR2J3-215ENST00000511313 PDGFRLQ15198 375 aa10.29□□□□□ -0.76
POLR2J3-215ENST00000511313 GLMNQ92990 594 aa10.29□□□□□ -0.76
POLR2J3-215ENST00000511313 PCDHA7Q9UN72 937 aa10.29□□□□□ -0.76
POLR2J3-215ENST00000511313 C1RP00736 705 aa10.29□□□□□ -0.76
POLR2J3-215ENST00000511313 TEAD4Q15561 434 aa10.29□□□□□ -0.76
POLR2J3-215ENST00000511313 DCAF6Q58WW2 860 aa10.29□□□□□ -0.76
POLR2J3-215ENST00000511313 RYBPQ8N488 228 aaPredicted RBP10.29□□□□□ -0.76
POLR2J3-215ENST00000511313 BRD9Q9H8M2 597 aa10.29□□□□□ -0.76
POLR2J3-215ENST00000511313 KCNMB3Q9NPA1 279 aa10.29□□□□□ -0.76
POLR2J3-215ENST00000511313 RAD18Q9NS91 495 aa10.29□□□□□ -0.76
POLR2J3-215ENST00000511313 KIAA1468Q9P260 1216 aa10.29□□□□□ -0.76
POLR2J3-215ENST00000511313 ADGRA3Q8IWK6 1321 aa10.29□□□□□ -0.76
POLR2J3-215ENST00000511313 CCDC88AQ3V6T2 1871 aa10.29□□□□□ -0.76
POLR2J3-215ENST00000511313 VDRP11473 427 aa10.29□□□□□ -0.76
POLR2J3-215ENST00000511313 EFHC2Q5JST6 749 aa10.29□□□□□ -0.76
POLR2J3-215ENST00000511313 CATSPER3Q86XQ3 398 aa10.29□□□□□ -0.76
POLR2J3-215ENST00000511313 BRSK2Q8IWQ3 736 aa10.29□□□□□ -0.76
POLR2J3-215ENST00000511313 ADGRF2Q8IZF7 708 aa10.29□□□□□ -0.76
POLR2J3-215ENST00000511313 POLMQ9NP87 494 aaPredicted RBP10.29□□□□□ -0.76
POLR2J3-215ENST00000511313 NPTX2P47972 431 aa10.28□□□□□ -0.76
POLR2J3-215ENST00000511313 NCOA4Q13772 614 aa10.28□□□□□ -0.76
POLR2J3-215ENST00000511313 MTFR1Q15390 333 aa10.28□□□□□ -0.76
POLR2J3-215ENST00000511313 PLA2G4FQ68DD2 849 aa10.28□□□□□ -0.76
POLR2J3-215ENST00000511313 SMARCD1Q96GM5 515 aa10.28□□□□□ -0.76
POLR2J3-215ENST00000511313 PTPN18Q99952 460 aa10.28□□□□□ -0.76
POLR2J3-215ENST00000511313 TSSK1BQ9BXA7 367 aa10.28□□□□□ -0.76
POLR2J3-215ENST00000511313 LAMB2P55268 1798 aa10.28□□□□□ -0.76
POLR2J3-215ENST00000511313 NEMP1O14524 444 aa10.28□□□□□ -0.76
POLR2J3-215ENST00000511313 ANO4Q32M45 955 aa10.28□□□□□ -0.76
POLR2J3-215ENST00000511313 TAOK1Q7L7X3 1001 aa10.28□□□□□ -0.76
POLR2J3-215ENST00000511313 ECHDC2Q86YB7 292 aa10.28□□□□□ -0.76
POLR2J3-215ENST00000511313 DEPDC1BQ8WUY9 529 aa10.28□□□□□ -0.76
POLR2J3-215ENST00000511313 CCDC77Q9BR77 488 aa10.28□□□□□ -0.76
POLR2J3-215ENST00000511313 LSM14BQ9BX40 385 aaKnown RBP10.28□□□□□ -0.76
POLR2J3-215ENST00000511313 TMX1Q9H3N1 280 aa10.28□□□□□ -0.76
POLR2J3-215ENST00000511313 DMAP1Q9NPF5 467 aaPredicted RBP10.28□□□□□ -0.76
POLR2J3-215ENST00000511313 IGSF9Q9P2J2 1179 aa10.28□□□□□ -0.76
POLR2J3-215ENST00000511313 MAGED2Q9UNF1 606 aaPredicted RBP10.28□□□□□ -0.76
POLR2J3-215ENST00000511313 NDUFS2O75306 463 aa10.28□□□□□ -0.76
POLR2J3-215ENST00000511313 EN2P19622 333 aaPredicted RBP10.28□□□□□ -0.76
POLR2J3-215ENST00000511313 BCAT1P54687 386 aa10.28□□□□□ -0.76
POLR2J3-215ENST00000511313 CENPCQ03188 943 aa10.28□□□□□ -0.76
POLR2J3-215ENST00000511313 TUBB2AQ13885 445 aa10.28□□□□□ -0.76
POLR2J3-215ENST00000511313 TFDP2Q14188 446 aa10.28□□□□□ -0.76
POLR2J3-215ENST00000511313 TMTC1Q8IUR5 882 aa10.28□□□□□ -0.76
POLR2J3-215ENST00000511313 KLHDC9Q8NEP7 349 aa10.28□□□□□ -0.76
POLR2J3-215ENST00000511313 IRF7Q92985 503 aa10.28□□□□□ -0.76
POLR2J3-215ENST00000511313 TCF25Q9BQ70 676 aa10.28□□□□□ -0.76
POLR2J3-215ENST00000511313 TUBB2BQ9BVA1 445 aa10.28□□□□□ -0.76
POLR2J3-215ENST00000511313 TARS2Q9BW92 718 aaKnown RBP10.28□□□□□ -0.76
POLR2J3-215ENST00000511313 CATSPERBQ9H7T0 1116 aa10.28□□□□□ -0.76
POLR2J3-215ENST00000511313 HOMER3Q9NSC5 361 aa10.28□□□□□ -0.76
POLR2J3-215ENST00000511313 PLA2G4CQ9UP65 541 aa10.28□□□□□ -0.76
POLR2J3-215ENST00000511313 KANSL1LA0AUZ9 987 aa10.27□□□□□ -0.76
POLR2J3-215ENST00000511313 MACROD2A1Z1Q3 448 aa10.27□□□□□ -0.76
POLR2J3-215ENST00000511313 E7EVH7 732 aa10.27□□□□□ -0.76
POLR2J3-215ENST00000511313 PRPSAP2O60256 369 aa10.27□□□□□ -0.76
POLR2J3-215ENST00000511313 SLU7O95391 586 aaKnown RBP10.27□□□□□ -0.76
POLR2J3-215ENST00000511313 APODP05090 189 aa10.27□□□□□ -0.76
POLR2J3-215ENST00000511313 SDC4P31431 198 aa10.27□□□□□ -0.76
POLR2J3-215ENST00000511313 FAM187BQ17R55 369 aa10.27□□□□□ -0.76
POLR2J3-215ENST00000511313 ARHGEF26Q96DR7 871 aa10.27□□□□□ -0.76
POLR2J3-215ENST00000511313 ZNF518BQ9C0D4 1074 aa10.27□□□□□ -0.76
POLR2J3-215ENST00000511313 ATXN3LQ9H3M9 355 aa10.27□□□□□ -0.76
POLR2J3-215ENST00000511313 ADAM28Q9UKQ2 775 aa10.27□□□□□ -0.76
POLR2J3-215ENST00000511313 A0A0U1RQF3 1178 aa10.27□□□□□ -0.77
POLR2J3-215ENST00000511313 H3BRJ5 948 aa10.27□□□□□ -0.77
POLR2J3-215ENST00000511313 YWHAQP27348 245 aa10.27□□□□□ -0.77
POLR2J3-215ENST00000511313 FAM46CQ5VWP2 391 aa10.27□□□□□ -0.77
POLR2J3-215ENST00000511313 PLPP4Q5VZY2 271 aa10.27□□□□□ -0.77
POLR2J3-215ENST00000511313 WFIKKN2Q8TEU8 576 aa10.27□□□□□ -0.77
POLR2J3-215ENST00000511313 COPS5Q92905 334 aa10.27□□□□□ -0.77
POLR2J3-215ENST00000511313 SYT15Q9BQS2 421 aa10.27□□□□□ -0.77
POLR2J3-215ENST00000511313 ZFP14Q9HCL3 533 aa10.27□□□□□ -0.77
POLR2J3-215ENST00000511313 PDGFCQ9NRA1 345 aa10.27□□□□□ -0.77
POLR2J3-215ENST00000511313 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.27□□□□□ -0.77
POLR2J3-215ENST00000511313 CTTNBP2NLQ9P2B4 639 aa10.27□□□□□ -0.77
POLR2J3-215ENST00000511313 TXNDC16Q9P2K2 825 aa10.27□□□□□ -0.77
POLR2J3-215ENST00000511313 NPC1O15118 1278 aa10.27□□□□□ -0.77
POLR2J3-215ENST00000511313 SULT2A1Q06520 285 aa10.27□□□□□ -0.77
POLR2J3-215ENST00000511313 ELF2Q15723 593 aa10.27□□□□□ -0.77
POLR2J3-215ENST00000511313 LONRF3Q496Y0 759 aa10.27□□□□□ -0.77
POLR2J3-215ENST00000511313 NUGGCQ68CJ6 796 aa10.27□□□□□ -0.77
POLR2J3-215ENST00000511313 KCNT2Q6UVM3 1135 aa10.27□□□□□ -0.77
POLR2J3-215ENST00000511313 CCDC50Q8IVM0 306 aa10.27□□□□□ -0.77
POLR2J3-215ENST00000511313 VPS52Q8N1B4 723 aa10.27□□□□□ -0.77
POLR2J3-215ENST00000511313 OTUD6BQ8N6M0 293 aa10.27□□□□□ -0.77
POLR2J3-215ENST00000511313 RTP3Q9BQQ7 232 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms