RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 MBD6Q96DN6 1003 aa6.55□□□□□ -1.36
HMGB1P47-201ENST00000511281 IQCDQ96DY2 449 aa6.55□□□□□ -1.36
HMGB1P47-201ENST00000511281 CEP95Q96GE4 821 aa6.55□□□□□ -1.36
HMGB1P47-201ENST00000511281 BORCS6Q96GS4 357 aa6.55□□□□□ -1.36
HMGB1P47-201ENST00000511281 TMEM168Q9H0V1 697 aa6.55□□□□□ -1.36
HMGB1P47-201ENST00000511281 BARX1Q9HBU1 254 aaPredicted RBP6.55□□□□□ -1.36
HMGB1P47-201ENST00000511281 GPR35Q9HC97 309 aa6.55□□□□□ -1.36
HMGB1P47-201ENST00000511281 TM7SF3Q9NS93 570 aa6.55□□□□□ -1.36
HMGB1P47-201ENST00000511281 JKAMPQ9P055 326 aa6.55□□□□□ -1.36
HMGB1P47-201ENST00000511281 NTMQ9P121 344 aa6.55□□□□□ -1.36
HMGB1P47-201ENST00000511281 CFAP97Q9P2B7 532 aa6.55□□□□□ -1.36
HMGB1P47-201ENST00000511281 GPR52Q9Y2T5 361 aa6.55□□□□□ -1.36
HMGB1P47-201ENST00000511281 PCDHGB3Q9Y5G1 929 aa6.55□□□□□ -1.36
HMGB1P47-201ENST00000511281 A0A087WWL8 130 aa6.54□□□□□ -1.36
HMGB1P47-201ENST00000511281 MBD3L4A6NDZ8 208 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P47-201ENST00000511281 MBD3L3A6NE82 208 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P47-201ENST00000511281 ARHGAP6O43182 974 aa6.54□□□□□ -1.36
HMGB1P47-201ENST00000511281 SKAP2O75563 359 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P47-201ENST00000511281 MED14OSP0DP75 135 aa6.54□□□□□ -1.36
HMGB1P47-201ENST00000511281 VEGFAP15692 232 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P47-201ENST00000511281 GLDCP23378 1020 aa6.54□□□□□ -1.36
HMGB1P47-201ENST00000511281 ALDH9A1P49189 494 aa6.54□□□□□ -1.36
HMGB1P47-201ENST00000511281 APBA1Q02410 837 aa6.54□□□□□ -1.36
HMGB1P47-201ENST00000511281 SLC13A2Q13183 592 aa6.54□□□□□ -1.36
HMGB1P47-201ENST00000511281 MRPL49Q13405 166 aaKnown RBP6.54□□□□□ -1.36
HMGB1P47-201ENST00000511281 KLHDC7AQ5VTJ3 777 aa6.54□□□□□ -1.36
HMGB1P47-201ENST00000511281 ZNF365Q70YC5 407 aa6.54□□□□□ -1.36
HMGB1P47-201ENST00000511281 ADGRE4PQ86SQ3 457 aa6.54□□□□□ -1.36
HMGB1P47-201ENST00000511281 SDR16C5Q8N3Y7 309 aa6.54□□□□□ -1.36
HMGB1P47-201ENST00000511281 ZNF527Q8NB42 609 aa6.54□□□□□ -1.36
HMGB1P47-201ENST00000511281 NLGN4YQ8NFZ3 816 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P47-201ENST00000511281 STON2Q8WXE9 905 aa6.54□□□□□ -1.36
HMGB1P47-201ENST00000511281 TNPO1Q92973 898 aaKnown RBP6.54□□□□□ -1.36
HMGB1P47-201ENST00000511281 GCC1Q96CN9 775 aa6.54□□□□□ -1.36
HMGB1P47-201ENST00000511281 SNX22Q96L94 193 aa6.54□□□□□ -1.36
HMGB1P47-201ENST00000511281 GPHA2Q96T91 129 aa6.54□□□□□ -1.36
HMGB1P47-201ENST00000511281 SPATA25Q9BR10 227 aa6.54□□□□□ -1.36
HMGB1P47-201ENST00000511281 NDC1Q9BTX1 674 aa6.54□□□□□ -1.36
HMGB1P47-201ENST00000511281 TMEM120AQ9BXJ8 343 aa6.54□□□□□ -1.36
HMGB1P47-201ENST00000511281 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P47-201ENST00000511281 SACM1LQ9NTJ5 587 aa6.54□□□□□ -1.36
HMGB1P47-201ENST00000511281 SAGE1Q9NXZ1 904 aa6.54□□□□□ -1.36
HMGB1P47-201ENST00000511281 SRRDQ9UH36 339 aa6.54□□□□□ -1.36
HMGB1P47-201ENST00000511281 FAM184BQ9ULE4 1060 aa6.54□□□□□ -1.36
HMGB1P47-201ENST00000511281 CXorf49A8MYA2 514 aaPredicted RBP6.53□□□□□ -1.36
HMGB1P47-201ENST00000511281 THAP12O43422 761 aa6.53□□□□□ -1.36
HMGB1P47-201ENST00000511281 TBC1D4O60343 1298 aa6.53□□□□□ -1.36
HMGB1P47-201ENST00000511281 MT-ND5P03915 603 aa6.53□□□□□ -1.36
HMGB1P47-201ENST00000511281 GNAI3P08754 354 aa6.53□□□□□ -1.36
HMGB1P47-201ENST00000511281 SBK3P0C264 359 aa6.53□□□□□ -1.36
HMGB1P47-201ENST00000511281 RARBP10826 455 aa6.53□□□□□ -1.36
HMGB1P47-201ENST00000511281 CASRP41180 1078 aa6.53□□□□□ -1.36
HMGB1P47-201ENST00000511281 GNAI1P63096 354 aa6.53□□□□□ -1.36
HMGB1P47-201ENST00000511281 ATP2C1P98194 919 aaPredicted RBP6.53□□□□□ -1.36
HMGB1P47-201ENST00000511281 CREMQ03060 361 aa6.53□□□□□ -1.36
HMGB1P47-201ENST00000511281 GALNT1Q10472 559 aaPredicted RBP6.53□□□□□ -1.36
HMGB1P47-201ENST00000511281 TCF15Q12870 199 aa6.53□□□□□ -1.36
HMGB1P47-201ENST00000511281 PPFIA1Q13136 1202 aa6.53□□□□□ -1.36
HMGB1P47-201ENST00000511281 RAB32Q13637 225 aa6.53□□□□□ -1.36
HMGB1P47-201ENST00000511281 TBR1Q16650 682 aa6.53□□□□□ -1.36
HMGB1P47-201ENST00000511281 ZACNQ401N2 412 aa6.53□□□□□ -1.36
HMGB1P47-201ENST00000511281 SLC44A4Q53GD3 710 aa6.53□□□□□ -1.36
HMGB1P47-201ENST00000511281 ZFYVE27Q5T4F4 411 aa6.53□□□□□ -1.36
HMGB1P47-201ENST00000511281 CCDC70Q6NSX1 233 aa6.53□□□□□ -1.36
HMGB1P47-201ENST00000511281 MYCT1Q8N699 235 aa6.53□□□□□ -1.36
HMGB1P47-201ENST00000511281 ANKRD53Q8N9V6 530 aa6.53□□□□□ -1.36
HMGB1P47-201ENST00000511281 TRAPPC12Q8WVT3 735 aa6.53□□□□□ -1.36
HMGB1P47-201ENST00000511281 CFHR4Q92496 578 aa6.53□□□□□ -1.36
HMGB1P47-201ENST00000511281 DDX17Q92841 729 aaKnown RBP6.53□□□□□ -1.36
HMGB1P47-201ENST00000511281 TBATAQ96M53 351 aa6.53□□□□□ -1.36
HMGB1P47-201ENST00000511281 TMEM8AQ9HCN3 771 aa6.53□□□□□ -1.36
HMGB1P47-201ENST00000511281 ZFP64Q9NPA5 681 aa6.53□□□□□ -1.36
HMGB1P47-201ENST00000511281 GJD2Q9UKL4 321 aa6.53□□□□□ -1.36
HMGB1P47-201ENST00000511281 IRAK3Q9Y616 596 aa6.53□□□□□ -1.36
HMGB1P47-201ENST00000511281 ZMYM3Q14202 1370 aa6.53□□□□□ -1.36
HMGB1P47-201ENST00000511281 B5MCH6 92 aa6.52□□□□□ -1.37
HMGB1P47-201ENST00000511281 DNAJB5O75953 348 aa6.52□□□□□ -1.37
HMGB1P47-201ENST00000511281 SASH1O94885 1247 aa6.52□□□□□ -1.37
HMGB1P47-201ENST00000511281 SNRPA1P09661 255 aaKnown RBP6.52□□□□□ -1.37
HMGB1P47-201ENST00000511281 IL1R1P14778 569 aa6.52□□□□□ -1.37
HMGB1P47-201ENST00000511281 ATP5JP18859 108 aa6.52□□□□□ -1.37
HMGB1P47-201ENST00000511281 KLRC1P26715 233 aa6.52□□□□□ -1.37
HMGB1P47-201ENST00000511281 POU6F2P78424 691 aaPredicted RBP6.52□□□□□ -1.37
HMGB1P47-201ENST00000511281 KRT40Q6A162 431 aa6.52□□□□□ -1.37
HMGB1P47-201ENST00000511281 VGLL2Q8N8G2 317 aa6.52□□□□□ -1.37
HMGB1P47-201ENST00000511281 TEX19Q8NA77 164 aa6.52□□□□□ -1.37
HMGB1P47-201ENST00000511281 IL17REQ8NFR9 667 aa6.52□□□□□ -1.37
HMGB1P47-201ENST00000511281 FBXO18Q8NFZ0 1043 aa6.52□□□□□ -1.37
HMGB1P47-201ENST00000511281 ZNF566Q969W8 418 aa6.52□□□□□ -1.37
HMGB1P47-201ENST00000511281 PPP1R16BQ96T49 567 aa6.52□□□□□ -1.37
HMGB1P47-201ENST00000511281 RMDN3Q96TC7 470 aa6.52□□□□□ -1.37
HMGB1P47-201ENST00000511281 MRI1Q9BV20 369 aa6.52□□□□□ -1.37
HMGB1P47-201ENST00000511281 PACSIN1Q9BY11 444 aa6.52□□□□□ -1.37
HMGB1P47-201ENST00000511281 A1CFQ9NQ94 594 aaKnown RBP6.52□□□□□ -1.37
HMGB1P47-201ENST00000511281 NECTIN3Q9NQS3 549 aa6.52□□□□□ -1.37
HMGB1P47-201ENST00000511281 RUVBL1Q9Y265 456 aaKnown RBP6.52□□□□□ -1.37
HMGB1P47-201ENST00000511281 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.52□□□□□ -1.37
HMGB1P47-201ENST00000511281 PYCARD-AS1I3L0S3 204 aa6.51□□□□□ -1.37
HMGB1P47-201ENST00000511281 SYT5O00445 386 aa6.51□□□□□ -1.37
HMGB1P47-201ENST00000511281 NPC1O15118 1278 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms