RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 LINC00476Q8WZB0 136 aa9.04□□□□□ -0.96
USP53-206ENST00000510737 CDC5LQ99459 802 aaKnown RBP9.04□□□□□ -0.96
USP53-206ENST00000510737 WNT8AQ9H1J5 351 aa9.04□□□□□ -0.96
USP53-206ENST00000510737 GPRC5DQ9NZD1 345 aa9.04□□□□□ -0.96
USP53-206ENST00000510737 EDARQ9UNE0 448 aa9.04□□□□□ -0.96
USP53-206ENST00000510737 MAP3K2Q9Y2U5 619 aa9.04□□□□□ -0.96
USP53-206ENST00000510737 PRAG1Q86YV5 1406 aa9.04□□□□□ -0.96
USP53-206ENST00000510737 MARCH11A6NNE9 402 aa9.03□□□□□ -0.96
USP53-206ENST00000510737 GSG1L2A8MUP6 293 aa9.03□□□□□ -0.96
USP53-206ENST00000510737 ADCY6O43306 1168 aa9.03□□□□□ -0.96
USP53-206ENST00000510737 LGALS4P56470 323 aa9.03□□□□□ -0.96
USP53-206ENST00000510737 TP53BP2Q13625 1128 aa9.03□□□□□ -0.96
USP53-206ENST00000510737 SART3Q15020 963 aaKnown RBP9.03□□□□□ -0.96
USP53-206ENST00000510737 PRAMEF14Q5SWL7 426 aa9.03□□□□□ -0.96
USP53-206ENST00000510737 PLXDC1Q8IUK5 500 aa9.03□□□□□ -0.96
USP53-206ENST00000510737 SLC35B2Q8TB61 432 aa9.03□□□□□ -0.96
USP53-206ENST00000510737 RSAD2Q8WXG1 361 aa9.03□□□□□ -0.96
USP53-206ENST00000510737 UBXN4Q92575 508 aa9.03□□□□□ -0.96
USP53-206ENST00000510737 SLC5A5Q92911 643 aa9.03□□□□□ -0.96
USP53-206ENST00000510737 DRC1Q96MC2 740 aa9.03□□□□□ -0.96
USP53-206ENST00000510737 CLCA2Q9UQC9 943 aa9.03□□□□□ -0.96
USP53-206ENST00000510737 GOLGB1Q14789 3259 aaKnown RBP9.03□□□□□ -0.96
USP53-206ENST00000510737 E9PCH4 1651 aa9.03□□□□□ -0.96
USP53-206ENST00000510737 SPATA31A1Q5TZJ5 1347 aa9.03□□□□□ -0.96
USP53-206ENST00000510737 B5MCH6 92 aa9.02□□□□□ -0.97
USP53-206ENST00000510737 MEF2AQ02078 507 aaPredicted RBP9.02□□□□□ -0.97
USP53-206ENST00000510737 AHI1Q8N157 1196 aa9.02□□□□□ -0.97
USP53-206ENST00000510737 ASB10Q8WXI3 467 aa9.02□□□□□ -0.97
USP53-206ENST00000510737 R3HDMLQ9H3Y0 253 aa9.02□□□□□ -0.97
USP53-206ENST00000510737 PTGFRNQ9P2B2 879 aa9.02□□□□□ -0.97
USP53-206ENST00000510737 MRPL42Q9Y6G3 142 aaKnown RBP9.02□□□□□ -0.97
USP53-206ENST00000510737 CCDC144AA2RUR9 1427 aa9.02□□□□□ -0.97
USP53-206ENST00000510737 NAIPQ13075 1403 aa9.02□□□□□ -0.97
USP53-206ENST00000510737 TNS3Q68CZ2 1445 aa9.02□□□□□ -0.97
USP53-206ENST00000510737 DLC1Q96QB1 1528 aa9.01□□□□□ -0.97
USP53-206ENST00000510737 A0A087X0B3 334 aa9.01□□□□□ -0.97
USP53-206ENST00000510737 DIRC3C9JPN6 131 aa9.01□□□□□ -0.97
USP53-206ENST00000510737 HSPA6P17066 643 aa9.01□□□□□ -0.97
USP53-206ENST00000510737 SEC24CP53992 1094 aa9.01□□□□□ -0.97
USP53-206ENST00000510737 USP14P54578 494 aa9.01□□□□□ -0.97
USP53-206ENST00000510737 RASSF3Q86WH2 238 aa9.01□□□□□ -0.97
USP53-206ENST00000510737 TFAP2CQ92754 450 aa9.01□□□□□ -0.97
USP53-206ENST00000510737 ALG13Q9NP73 1137 aaKnown RBP9.01□□□□□ -0.97
USP53-206ENST00000510737 SBNO1A3KN83 1393 aa9□□□□□ -0.97
USP53-206ENST00000510737 SPDEFO95238 335 aa9□□□□□ -0.97
USP53-206ENST00000510737 PLA2G5P39877 138 aa9□□□□□ -0.97
USP53-206ENST00000510737 GPR162Q16538 588 aa9□□□□□ -0.97
USP53-206ENST00000510737 EFCAB12Q6NXP0 572 aa9□□□□□ -0.97
USP53-206ENST00000510737 JAZF1Q86VZ6 243 aa9□□□□□ -0.97
USP53-206ENST00000510737 LCORLQ8N3X6 602 aa9□□□□□ -0.97
USP53-206ENST00000510737 SUPT20HQ8NEM7 779 aa9□□□□□ -0.97
USP53-206ENST00000510737 REPS2Q8NFH8 660 aa9□□□□□ -0.97
USP53-206ENST00000510737 EAF2Q96CJ1 260 aaPredicted RBP9□□□□□ -0.97
USP53-206ENST00000510737 MFSD3Q96ES6 412 aa9□□□□□ -0.97
USP53-206ENST00000510737 POGKQ9P215 609 aa9□□□□□ -0.97
USP53-206ENST00000510737 USP15Q9Y4E8 981 aaPredicted RBP9□□□□□ -0.97
USP53-206ENST00000510737 PIPSLA2A3N6 862 aa8.99□□□□□ -0.97
USP53-206ENST00000510737 MASP2O00187 686 aa8.99□□□□□ -0.97
USP53-206ENST00000510737 CDC45O75419 566 aa8.99□□□□□ -0.97
USP53-206ENST00000510737 RBP3P10745 1247 aa8.99□□□□□ -0.97
USP53-206ENST00000510737 GUCY1B3Q02153 619 aa8.99□□□□□ -0.97
USP53-206ENST00000510737 COLEC12Q5KU26 742 aa8.99□□□□□ -0.97
USP53-206ENST00000510737 PTF1AQ7RTS3 328 aa8.99□□□□□ -0.97
USP53-206ENST00000510737 C11orf74Q86VG3 221 aa8.99□□□□□ -0.97
USP53-206ENST00000510737 LEO1Q8WVC0 666 aaPredicted RBP8.99□□□□□ -0.97
USP53-206ENST00000510737 FEZ1Q99689 392 aa8.99□□□□□ -0.97
USP53-206ENST00000510737 TOPORSQ9NS56 1045 aaPredicted RBP8.99□□□□□ -0.97
USP53-206ENST00000510737 STK26Q9P289 416 aa8.99□□□□□ -0.97
USP53-206ENST00000510737 NOC2LQ9Y3T9 749 aaKnown RBP8.99□□□□□ -0.97
USP53-206ENST00000510737 RAB11FIP3O75154 756 aa8.98□□□□□ -0.97
USP53-206ENST00000510737 DDX6P26196 483 aaKnown RBP eCLIP8.98□□□□□ -0.97
USP53-206ENST00000510737 PTH2RP49190 550 aa8.98□□□□□ -0.97
USP53-206ENST00000510737 CHN2P52757 468 aa8.98□□□□□ -0.97
USP53-206ENST00000510737 C21orf58P58505 322 aa8.98□□□□□ -0.97
USP53-206ENST00000510737 MRPS21P82921 87 aaKnown RBP8.98□□□□□ -0.97
USP53-206ENST00000510737 SCAPQ12770 1279 aa8.98□□□□□ -0.97
USP53-206ENST00000510737 USP35Q9P2H5 1018 aa8.98□□□□□ -0.97
USP53-206ENST00000510737 RGPD3A6NKT7 1758 aaPredicted RBP8.98□□□□□ -0.97
USP53-206ENST00000510737 RGPD4Q7Z3J3 1758 aa8.98□□□□□ -0.97
USP53-206ENST00000510737 ARHGEF10O15013 1369 aa8.98□□□□□ -0.97
USP53-206ENST00000510737 NUP155O75694 1391 aa8.98□□□□□ -0.97
USP53-206ENST00000510737 PLEKHH1Q9ULM0 1364 aa8.98□□□□□ -0.97
USP53-206ENST00000510737 KIF1AQ12756 1690 aa8.97□□□□□ -0.97
USP53-206ENST00000510737 DRGXA6NNA5 263 aa8.97□□□□□ -0.97
USP53-206ENST00000510737 BPIP17213 487 aa8.97□□□□□ -0.97
USP53-206ENST00000510737 ID4P47928 161 aa8.97□□□□□ -0.97
USP53-206ENST00000510737 STRIP1Q5VSL9 837 aa8.97□□□□□ -0.97
USP53-206ENST00000510737 KIAA0907Q7Z7F0 614 aaPredicted RBP8.97□□□□□ -0.97
USP53-206ENST00000510737 DNAJC5GQ8N7S2 189 aa8.97□□□□□ -0.97
USP53-206ENST00000510737 COQ10AQ96MF6 247 aa8.97□□□□□ -0.97
USP53-206ENST00000510737 KCNG1Q9UIX4 513 aa8.97□□□□□ -0.97
USP53-206ENST00000510737 PLAAQ9Y263 795 aa8.97□□□□□ -0.97
USP53-206ENST00000510737 PNPLA7Q6ZV29 1317 aa8.97□□□□□ -0.97
USP53-206ENST00000510737 GASTP01350 101 aa8.96□□□□□ -0.98
USP53-206ENST00000510737 ELANEP08246 267 aa8.96□□□□□ -0.98
USP53-206ENST00000510737 EGR2P11161 476 aaPredicted RBP8.96□□□□□ -0.98
USP53-206ENST00000510737 ZNF37AP17032 561 aaPredicted RBP8.96□□□□□ -0.98
USP53-206ENST00000510737 MGAT1P26572 445 aa8.96□□□□□ -0.98
USP53-206ENST00000510737 RESTQ13127 1097 aa8.96□□□□□ -0.98
USP53-206ENST00000510737 MST1LQ2TV78 715 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms