RNA–Protein interactions for RNA: ENST00000510576.6

CLMAT3-201, colorectal liver metastasis associated transcript 3, humanhuman

TSL 1 (best) BASIC

Gene CLMAT3, Length 1,973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLMAT3-201ENST00000510576 PASKQ96RG2 1323 aa17.67■□□□□ 0.42
CLMAT3-201ENST00000510576 SPDYE5A6NIY4 337 aa17.67■□□□□ 0.42
CLMAT3-201ENST00000510576 TTLL13PA6NNM8 815 aa17.67■□□□□ 0.42
CLMAT3-201ENST00000510576 SRGAP2CP0DJJ0 459 aa17.67■□□□□ 0.42
CLMAT3-201ENST00000510576 NF2P35240 595 aa17.67■□□□□ 0.42
CLMAT3-201ENST00000510576 TNFSF9P41273 254 aa17.67■□□□□ 0.42
CLMAT3-201ENST00000510576 EIF3BP55884 814 aaKnown RBP17.67■□□□□ 0.42
CLMAT3-201ENST00000510576 IFFO1Q0D2I5 559 aa17.67■□□□□ 0.42
CLMAT3-201ENST00000510576 MAPK6Q16659 721 aa17.67■□□□□ 0.42
CLMAT3-201ENST00000510576 PLPPR4Q7Z2D5 763 aa17.67■□□□□ 0.42
CLMAT3-201ENST00000510576 FBXO25Q8TCJ0 367 aa17.67■□□□□ 0.42
CLMAT3-201ENST00000510576 BCAS4Q8TDM0 211 aa17.67■□□□□ 0.42
CLMAT3-201ENST00000510576 VCPIP1Q96JH7 1222 aa17.67■□□□□ 0.42
CLMAT3-201ENST00000510576 FGD4Q96M96 766 aa17.67■□□□□ 0.42
CLMAT3-201ENST00000510576 MMP19Q99542 508 aa17.67■□□□□ 0.42
CLMAT3-201ENST00000510576 ACO2Q99798 780 aaKnown RBP17.67■□□□□ 0.42
CLMAT3-201ENST00000510576 R3HDMLQ9H3Y0 253 aa17.67■□□□□ 0.42
CLMAT3-201ENST00000510576 LRRC19Q9H756 370 aa17.67■□□□□ 0.42
CLMAT3-201ENST00000510576 MRPL47Q9HD33 250 aaKnown RBP17.67■□□□□ 0.42
CLMAT3-201ENST00000510576 OGTO15294 1046 aa17.66■□□□□ 0.42
CLMAT3-201ENST00000510576 FAM189A1O60320 539 aa17.66■□□□□ 0.42
CLMAT3-201ENST00000510576 PROSCO94903 275 aa17.66■□□□□ 0.42
CLMAT3-201ENST00000510576 ECEL1O95672 775 aa17.66■□□□□ 0.42
CLMAT3-201ENST00000510576 CFHP08603 1231 aa17.66■□□□□ 0.42
CLMAT3-201ENST00000510576 PMS2P54278 862 aa17.66■□□□□ 0.42
CLMAT3-201ENST00000510576 TTLL12Q14166 644 aaPredicted RBP17.66■□□□□ 0.42
CLMAT3-201ENST00000510576 KCTD2Q14681 263 aa17.66■□□□□ 0.42
CLMAT3-201ENST00000510576 SURF1Q15526 300 aa17.66■□□□□ 0.42
CLMAT3-201ENST00000510576 HSDL1Q3SXM5 330 aa17.66■□□□□ 0.42
CLMAT3-201ENST00000510576 C2CD6Q53TS8 623 aa17.66■□□□□ 0.42
CLMAT3-201ENST00000510576 SGO2Q562F6 1265 aa17.66■□□□□ 0.42
CLMAT3-201ENST00000510576 TRIM50Q86XT4 487 aa17.66■□□□□ 0.42
CLMAT3-201ENST00000510576 PHF13Q86YI8 300 aaPredicted RBP17.66■□□□□ 0.42
CLMAT3-201ENST00000510576 LRRC71Q8N4P6 559 aa17.66■□□□□ 0.42
CLMAT3-201ENST00000510576 RNF149Q8NC42 400 aa17.66■□□□□ 0.42
CLMAT3-201ENST00000510576 BCCIPQ9P287 314 aaKnown RBP eCLIP17.66■□□□□ 0.42
CLMAT3-201ENST00000510576 KCNH4Q9UQ05 1017 aa17.66■□□□□ 0.42
CLMAT3-201ENST00000510576 SCINQ9Y6U3 715 aa17.66■□□□□ 0.42
CLMAT3-201ENST00000510576 PPIL2Q13356 520 aa17.66■□□□□ 0.42
CLMAT3-201ENST00000510576 KRT71Q3SY84 523 aa17.66■□□□□ 0.42
CLMAT3-201ENST00000510576 LLGL2Q6P1M3 1020 aa17.66■□□□□ 0.42
CLMAT3-201ENST00000510576 DHX37Q8IY37 1157 aaKnown RBP17.66■□□□□ 0.42
CLMAT3-201ENST00000510576 FAM212AQ96EL1 285 aa17.66■□□□□ 0.42
CLMAT3-201ENST00000510576 JPH2Q9BR39 696 aaPredicted RBP17.66■□□□□ 0.42
CLMAT3-201ENST00000510576 TXNRD2Q9NNW7 524 aa17.66■□□□□ 0.42
CLMAT3-201ENST00000510576 RNF181Q9P0P0 153 aa17.66■□□□□ 0.42
CLMAT3-201ENST00000510576 PTPN22Q9Y2R2 807 aa17.66■□□□□ 0.42
CLMAT3-201ENST00000510576 ANK1P16157 1881 aa17.66■□□□□ 0.42
CLMAT3-201ENST00000510576 IGKV6-21A0A0C4DH24 114 aa17.65■□□□□ 0.42
CLMAT3-201ENST00000510576 ASS1P00966 412 aaKnown RBP17.65■□□□□ 0.42
CLMAT3-201ENST00000510576 OSBPP22059 807 aa17.65■□□□□ 0.42
CLMAT3-201ENST00000510576 SSTR3P32745 418 aaPredicted RBP17.65■□□□□ 0.42
CLMAT3-201ENST00000510576 HPDP32754 393 aaPredicted RBP17.65■□□□□ 0.42
CLMAT3-201ENST00000510576 C1QBPQ07021 282 aaKnown RBP17.65■□□□□ 0.42
CLMAT3-201ENST00000510576 MCL1Q07820 350 aa17.65■□□□□ 0.42
CLMAT3-201ENST00000510576 PTP4A2Q12974 167 aa17.65■□□□□ 0.42
CLMAT3-201ENST00000510576 MKRN4PQ13434 485 aaPredicted RBP17.65■□□□□ 0.42
CLMAT3-201ENST00000510576 PLCB4Q15147 1175 aa17.65■□□□□ 0.42
CLMAT3-201ENST00000510576 SRLQ86TD4 932 aa17.65■□□□□ 0.42
CLMAT3-201ENST00000510576 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.65■□□□□ 0.42
CLMAT3-201ENST00000510576 CDCA5Q96FF9 252 aa17.65■□□□□ 0.42
CLMAT3-201ENST00000510576 SPATA33Q96N06 139 aa17.65■□□□□ 0.42
CLMAT3-201ENST00000510576 FAM129AQ9BZQ8 928 aa17.65■□□□□ 0.42
CLMAT3-201ENST00000510576 MTMR12Q9C0I1 747 aa17.65■□□□□ 0.42
CLMAT3-201ENST00000510576 PABPC3Q9H361 631 aaKnown RBP17.65■□□□□ 0.42
CLMAT3-201ENST00000510576 RBPJLQ9UBG7 517 aa17.65■□□□□ 0.42
CLMAT3-201ENST00000510576 RRP15Q9Y3B9 282 aaKnown RBP17.65■□□□□ 0.42
CLMAT3-201ENST00000510576 DNAJC25-GNG10A0A024R161 153 aa17.64■□□□□ 0.41
CLMAT3-201ENST00000510576 ZBTB42B2RXF5 422 aa17.64■□□□□ 0.41
CLMAT3-201ENST00000510576 PSTPIP1O43586 416 aa17.64■□□□□ 0.41
CLMAT3-201ENST00000510576 ZEB2O60315 1214 aa17.64■□□□□ 0.41
CLMAT3-201ENST00000510576 MDH1P40925 334 aaKnown RBP17.64■□□□□ 0.41
CLMAT3-201ENST00000510576 KCNJ1P48048 391 aa17.64■□□□□ 0.41
CLMAT3-201ENST00000510576 ZNF132P52740 706 aa17.64■□□□□ 0.41
CLMAT3-201ENST00000510576 GUCY1A3Q02108 690 aa17.64■□□□□ 0.41
CLMAT3-201ENST00000510576 PPP1R7Q15435 360 aa17.64■□□□□ 0.41
CLMAT3-201ENST00000510576 DENND2CQ68D51 928 aa17.64■□□□□ 0.41
CLMAT3-201ENST00000510576 MMS22LQ6ZRQ5 1243 aa17.64■□□□□ 0.41
CLMAT3-201ENST00000510576 MOB2Q70IA6 237 aa17.64■□□□□ 0.41
CLMAT3-201ENST00000510576 HOOK3Q86VS8 718 aa17.64■□□□□ 0.41
CLMAT3-201ENST00000510576 FBXO16Q8IX29 292 aaPredicted RBP17.64■□□□□ 0.41
CLMAT3-201ENST00000510576 UBR7Q8N806 425 aa17.64■□□□□ 0.41
CLMAT3-201ENST00000510576 SLCO2A1Q92959 643 aa17.64■□□□□ 0.41
CLMAT3-201ENST00000510576 DDX27Q96GQ7 796 aaKnown RBP17.64■□□□□ 0.41
CLMAT3-201ENST00000510576 CST3P01034 146 aaPredicted RBP17.64■□□□□ 0.41
CLMAT3-201ENST00000510576 NUDT17P0C025 328 aa17.64■□□□□ 0.41
CLMAT3-201ENST00000510576 LSP1P33241 339 aa17.64■□□□□ 0.41
CLMAT3-201ENST00000510576 MAN1A1P33908 653 aa17.64■□□□□ 0.41
CLMAT3-201ENST00000510576 CCT5P48643 541 aa17.64■□□□□ 0.41
CLMAT3-201ENST00000510576 MAMLD1Q13495 774 aa17.64■□□□□ 0.41
CLMAT3-201ENST00000510576 TFDP1Q14186 410 aa17.64■□□□□ 0.41
CLMAT3-201ENST00000510576 GPR162Q16538 588 aa17.64■□□□□ 0.41
CLMAT3-201ENST00000510576 DUOXA2Q1HG44 320 aa17.64■□□□□ 0.41
CLMAT3-201ENST00000510576 Q3C1V9 767 aa17.64■□□□□ 0.41
CLMAT3-201ENST00000510576 WDR78Q5VTH9 848 aa17.64■□□□□ 0.41
CLMAT3-201ENST00000510576 PLEKHA7Q6IQ23 1121 aa17.64■□□□□ 0.41
CLMAT3-201ENST00000510576 RHPN2Q8IUC4 686 aa17.64■□□□□ 0.41
CLMAT3-201ENST00000510576 C1orf54Q8WWF1 131 aa17.64■□□□□ 0.41
CLMAT3-201ENST00000510576 NIF3L1Q9GZT8 377 aa17.64■□□□□ 0.41
CLMAT3-201ENST00000510576 RABEP2Q9H5N1 569 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms