RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 TPGS2Q68CL5 300 aa16.76■□□□□ 0.27
TPM3-219ENST00000509409 NPAS3Q8IXF0 933 aa16.76■□□□□ 0.27
TPM3-219ENST00000509409 TCEAL8Q8IYN2 117 aa16.76■□□□□ 0.27
TPM3-219ENST00000509409 NKD2Q969F2 451 aaPredicted RBP16.76■□□□□ 0.27
TPM3-219ENST00000509409 HAPLN2Q9GZV7 340 aa16.76■□□□□ 0.27
TPM3-219ENST00000509409 RPF1Q9H9Y2 349 aaKnown RBP16.76■□□□□ 0.27
TPM3-219ENST00000509409 PARVGQ9HBI0 331 aa16.76■□□□□ 0.27
TPM3-219ENST00000509409 PCDHB8Q9UN66 801 aa16.76■□□□□ 0.27
TPM3-219ENST00000509409 ZNF197O14709 1029 aa16.75■□□□□ 0.27
TPM3-219ENST00000509409 HNRNPDLO14979 420 aaKnown RBP16.75■□□□□ 0.27
TPM3-219ENST00000509409 XPOTO43592 962 aaKnown RBP16.75■□□□□ 0.27
TPM3-219ENST00000509409 TRAK2O60296 914 aa16.75■□□□□ 0.27
TPM3-219ENST00000509409 TBCAO75347 108 aaKnown RBP16.75■□□□□ 0.27
TPM3-219ENST00000509409 SEC24AO95486 1093 aa16.75■□□□□ 0.27
TPM3-219ENST00000509409 CPB1P15086 417 aa16.75■□□□□ 0.27
TPM3-219ENST00000509409 PLCG1P19174 1290 aa16.75■□□□□ 0.27
TPM3-219ENST00000509409 TNFSF9P41273 254 aa16.75■□□□□ 0.27
TPM3-219ENST00000509409 PFKPQ01813 784 aa16.75■□□□□ 0.27
TPM3-219ENST00000509409 GRIN1Q05586 938 aa16.75■□□□□ 0.27
TPM3-219ENST00000509409 ADCY1Q08828 1119 aa16.75■□□□□ 0.27
TPM3-219ENST00000509409 CYP4A22Q5TCH4 519 aa16.75■□□□□ 0.27
TPM3-219ENST00000509409 IQCEQ6IPM2 695 aa16.75■□□□□ 0.27
TPM3-219ENST00000509409 DSTYKQ6XUX3 929 aa16.75■□□□□ 0.27
TPM3-219ENST00000509409 USP37Q86T82 979 aa16.75■□□□□ 0.27
TPM3-219ENST00000509409 TMEM130Q8N3G9 435 aa16.75■□□□□ 0.27
TPM3-219ENST00000509409 RAD54LQ92698 747 aa16.75■□□□□ 0.27
TPM3-219ENST00000509409 ZNF512Q96ME7 567 aaPredicted RBP16.75■□□□□ 0.27
TPM3-219ENST00000509409 FOXQ1Q9C009 403 aa16.75■□□□□ 0.27
TPM3-219ENST00000509409 GDE1Q9NZC3 331 aa16.75■□□□□ 0.27
TPM3-219ENST00000509409 UBQLN1Q9UMX0 589 aaKnown RBP16.75■□□□□ 0.27
TPM3-219ENST00000509409 TIMM13Q9Y5L4 95 aaPredicted RBP16.75■□□□□ 0.27
TPM3-219ENST00000509409 TTC26A0AVF1 554 aa16.74■□□□□ 0.27
TPM3-219ENST00000509409 PRR23AA6NEV1 266 aa16.74■□□□□ 0.27
TPM3-219ENST00000509409 OGTO15294 1046 aa16.74■□□□□ 0.27
TPM3-219ENST00000509409 CEBPBP17676 345 aa16.74■□□□□ 0.27
TPM3-219ENST00000509409 SCP2P22307 547 aa16.74■□□□□ 0.27
TPM3-219ENST00000509409 STARD6P59095 220 aa16.74■□□□□ 0.27
TPM3-219ENST00000509409 YWHAHQ04917 246 aaPredicted RBP16.74■□□□□ 0.27
TPM3-219ENST00000509409 SLC5A9Q2M3M2 681 aa16.74■□□□□ 0.27
TPM3-219ENST00000509409 PDZD4Q76G19 769 aaPredicted RBP16.74■□□□□ 0.27
TPM3-219ENST00000509409 KCNG4Q8TDN1 519 aa16.74■□□□□ 0.27
TPM3-219ENST00000509409 MSTO1Q9BUK6 570 aa16.74■□□□□ 0.27
TPM3-219ENST00000509409 AVENQ9NQS1 362 aaPredicted RBP16.74■□□□□ 0.27
TPM3-219ENST00000509409 BLOC1S4Q9NUP1 217 aa16.74■□□□□ 0.27
TPM3-219ENST00000509409 AFF4Q9UHB7 1163 aaKnown RBP16.74■□□□□ 0.27
TPM3-219ENST00000509409 INSL5Q9Y5Q6 135 aa16.74■□□□□ 0.27
TPM3-219ENST00000509409 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.74■□□□□ 0.27
TPM3-219ENST00000509409 USP34Q70CQ2 3546 aa16.74■□□□□ 0.27
TPM3-219ENST00000509409 TULP1O00294 542 aaPredicted RBP16.73■□□□□ 0.27
TPM3-219ENST00000509409 CYP3A5P20815 502 aa16.73■□□□□ 0.27
TPM3-219ENST00000509409 NMT1P30419 496 aaKnown RBP16.73■□□□□ 0.27
TPM3-219ENST00000509409 LRPAP1P30533 357 aa16.73■□□□□ 0.27
TPM3-219ENST00000509409 DDIT3P35638 169 aa16.73■□□□□ 0.27
TPM3-219ENST00000509409 GUCY2FP51841 1108 aa16.73■□□□□ 0.27
TPM3-219ENST00000509409 PRKCQQ04759 706 aa16.73■□□□□ 0.27
TPM3-219ENST00000509409 TWF1Q12792 350 aa16.73■□□□□ 0.27
TPM3-219ENST00000509409 UBXN2BQ14CS0 331 aa16.73■□□□□ 0.27
TPM3-219ENST00000509409 MLF2Q15773 248 aaPredicted RBP16.73■□□□□ 0.27
TPM3-219ENST00000509409 RNF19BQ6ZMZ0 732 aa16.73■□□□□ 0.27
TPM3-219ENST00000509409 KRI1Q8N9T8 703 aaKnown RBP16.73■□□□□ 0.27
TPM3-219ENST00000509409 BEST2Q8NFU1 509 aa16.73■□□□□ 0.27
TPM3-219ENST00000509409 LRRC15Q8TF66 581 aa16.73■□□□□ 0.27
TPM3-219ENST00000509409 LARP4BQ92615 738 aaKnown RBP16.73■□□□□ 0.27
TPM3-219ENST00000509409 TCEAL4Q96EI5 215 aa16.73■□□□□ 0.27
TPM3-219ENST00000509409 MAFFQ9ULX9 164 aa16.73■□□□□ 0.27
TPM3-219ENST00000509409 VWA8A3KMH1 1905 aa16.72■□□□□ 0.27
TPM3-219ENST00000509409 KANSL1LA0AUZ9 987 aa16.72■□□□□ 0.27
TPM3-219ENST00000509409 M0QZQ0 153 aa16.72■□□□□ 0.27
TPM3-219ENST00000509409 ECI2O75521 394 aa16.72■□□□□ 0.27
TPM3-219ENST00000509409 PDCP20941 246 aa16.72■□□□□ 0.27
TPM3-219ENST00000509409 ABCD1P33897 745 aa16.72■□□□□ 0.27
TPM3-219ENST00000509409 ZNF131P52739 623 aa16.72■□□□□ 0.27
TPM3-219ENST00000509409 ZBTB6Q15916 424 aa16.72■□□□□ 0.27
TPM3-219ENST00000509409 ENOX2Q16206 610 aaKnown RBP16.72■□□□□ 0.27
TPM3-219ENST00000509409 ZBTB41Q5SVQ8 909 aa16.72■□□□□ 0.27
TPM3-219ENST00000509409 TANGO2Q6ICL3 276 aa16.72■□□□□ 0.27
TPM3-219ENST00000509409 C1orf210Q8IVY1 113 aa16.72■□□□□ 0.27
TPM3-219ENST00000509409 CD302Q8IX05 232 aa16.72■□□□□ 0.27
TPM3-219ENST00000509409 HS6ST3Q8IZP7 471 aa16.72■□□□□ 0.27
TPM3-219ENST00000509409 PJA1Q8NG27 643 aa16.72■□□□□ 0.27
TPM3-219ENST00000509409 PLA2G2FQ9BZM2 168 aa16.72■□□□□ 0.27
TPM3-219ENST00000509409 CCDC39Q9UFE4 941 aa16.72■□□□□ 0.27
TPM3-219ENST00000509409 CLIC4Q9Y696 253 aa16.72■□□□□ 0.27
TPM3-219ENST00000509409 DOCK8Q8NF50 2099 aa16.72■□□□□ 0.27
TPM3-219ENST00000509409 TRIP11Q15643 1979 aa16.71■□□□□ 0.27
TPM3-219ENST00000509409 DOCK6Q96HP0 2047 aa16.71■□□□□ 0.27
TPM3-219ENST00000509409 A0A0B4J269 797 aa16.71■□□□□ 0.27
TPM3-219ENST00000509409 FAM170BA6NMN3 283 aa16.71■□□□□ 0.27
TPM3-219ENST00000509409 LRRN2O75325 713 aa16.71■□□□□ 0.27
TPM3-219ENST00000509409 PIGRP01833 764 aa16.71■□□□□ 0.27
TPM3-219ENST00000509409 MYL4P12829 197 aa16.71■□□□□ 0.27
TPM3-219ENST00000509409 GTF2BQ00403 316 aa16.71■□□□□ 0.27
TPM3-219ENST00000509409 PRSS36Q5K4E3 855 aa16.71■□□□□ 0.27
TPM3-219ENST00000509409 ADALQ6DHV7 355 aa16.71■□□□□ 0.27
TPM3-219ENST00000509409 JADE1Q6IE81 842 aa16.71■□□□□ 0.27
TPM3-219ENST00000509409 ADSSL1Q8N142 457 aa16.71■□□□□ 0.27
TPM3-219ENST00000509409 KCNN1Q92952 543 aa16.71■□□□□ 0.27
TPM3-219ENST00000509409 ELSPBP1Q96BH3 223 aa16.71■□□□□ 0.27
TPM3-219ENST00000509409 EPSTI1Q96J88 318 aa16.71■□□□□ 0.27
TPM3-219ENST00000509409 PGLYRP2Q96PD5 576 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms