RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 SYN3O14994 580 aa17.52■□□□□ 0.4
PDLIM5-212ENST00000509333 KLRC4O43908 158 aa17.52■□□□□ 0.4
PDLIM5-212ENST00000509333 LDHAP00338 332 aaKnown RBP17.52■□□□□ 0.4
PDLIM5-212ENST00000509333 OR1D2P34982 312 aa17.52■□□□□ 0.4
PDLIM5-212ENST00000509333 GUCY2FP51841 1108 aa17.52■□□□□ 0.4
PDLIM5-212ENST00000509333 NDUFA8P51970 172 aa17.52■□□□□ 0.4
PDLIM5-212ENST00000509333 FAM26FQ5R3K3 315 aa17.52■□□□□ 0.4
PDLIM5-212ENST00000509333 ANKS3Q6ZW76 656 aa17.52■□□□□ 0.4
PDLIM5-212ENST00000509333 RNF135Q8IUD6 432 aa17.52■□□□□ 0.4
PDLIM5-212ENST00000509333 CEP57L1Q8IYX8 460 aa17.52■□□□□ 0.4
PDLIM5-212ENST00000509333 KREMEN2Q8NCW0 462 aa17.52■□□□□ 0.4
PDLIM5-212ENST00000509333 SCFD1Q8WVM8 642 aa17.52■□□□□ 0.4
PDLIM5-212ENST00000509333 CBWD1Q9BRT8 395 aa17.52■□□□□ 0.4
PDLIM5-212ENST00000509333 RHOBTB2Q9BYZ6 727 aa17.52■□□□□ 0.4
PDLIM5-212ENST00000509333 GDPD2Q9HCC8 539 aa17.52■□□□□ 0.4
PDLIM5-212ENST00000509333 MTRRQ9UBK8 725 aa17.52■□□□□ 0.4
PDLIM5-212ENST00000509333 NUB1Q9Y5A7 615 aa17.52■□□□□ 0.4
PDLIM5-212ENST00000509333 ANO9A1A5B4 782 aa17.51■□□□□ 0.39
PDLIM5-212ENST00000509333 TGFB1I1O43294 461 aa17.51■□□□□ 0.39
PDLIM5-212ENST00000509333 XPOTO43592 962 aaKnown RBP17.51■□□□□ 0.39
PDLIM5-212ENST00000509333 RFPL2O75678 378 aa17.51■□□□□ 0.39
PDLIM5-212ENST00000509333 NFICP08651 508 aa17.51■□□□□ 0.39
PDLIM5-212ENST00000509333 SYKP43405 635 aa17.51■□□□□ 0.39
PDLIM5-212ENST00000509333 AARSP49588 968 aaKnown RBP eCLIP17.51■□□□□ 0.39
PDLIM5-212ENST00000509333 VARS2Q5ST30 1063 aaKnown RBP17.51■□□□□ 0.39
PDLIM5-212ENST00000509333 CYP26C1Q6V0L0 522 aa17.51■□□□□ 0.39
PDLIM5-212ENST00000509333 C15orf39Q6ZRI6 1047 aa17.51■□□□□ 0.39
PDLIM5-212ENST00000509333 STXBP4Q6ZWJ1 553 aa17.51■□□□□ 0.39
PDLIM5-212ENST00000509333 ZNF707Q96C28 371 aaPredicted RBP17.51■□□□□ 0.39
PDLIM5-212ENST00000509333 FAM213AQ9BRX8 229 aa17.51■□□□□ 0.39
PDLIM5-212ENST00000509333 PCIF1Q9H4Z3 704 aa17.51■□□□□ 0.39
PDLIM5-212ENST00000509333 C2CD2Q9Y426 696 aa17.51■□□□□ 0.39
PDLIM5-212ENST00000509333 MYO10Q9HD67 2058 aa17.51■□□□□ 0.39
PDLIM5-212ENST00000509333 GOLGA8IPA6NC78 632 aa17.5■□□□□ 0.39
PDLIM5-212ENST00000509333 GOLGA8JA6NMD2 632 aa17.5■□□□□ 0.39
PDLIM5-212ENST00000509333 M0QZQ0 153 aa17.5■□□□□ 0.39
PDLIM5-212ENST00000509333 PPEF2O14830 753 aa17.5■□□□□ 0.39
PDLIM5-212ENST00000509333 EIF3DO15371 548 aaKnown RBP eCLIP17.5■□□□□ 0.39
PDLIM5-212ENST00000509333 EXTL3O43909 919 aa17.5■□□□□ 0.39
PDLIM5-212ENST00000509333 ZMYND10O75800 440 aa17.5■□□□□ 0.39
PDLIM5-212ENST00000509333 WNT7BP56706 349 aa17.5■□□□□ 0.39
PDLIM5-212ENST00000509333 LILRA4P59901 499 aa17.5■□□□□ 0.39
PDLIM5-212ENST00000509333 TMEM132DQ14C87 1099 aa17.5■□□□□ 0.39
PDLIM5-212ENST00000509333 C9orf57Q5W0N0 161 aa17.5■□□□□ 0.39
PDLIM5-212ENST00000509333 BEST2Q8NFU1 509 aa17.5■□□□□ 0.39
PDLIM5-212ENST00000509333 SAAL1Q96ER3 474 aa17.5■□□□□ 0.39
PDLIM5-212ENST00000509333 SLC39A2Q9NP94 309 aa17.5■□□□□ 0.39
PDLIM5-212ENST00000509333 PCDHB8Q9UN66 801 aa17.5■□□□□ 0.39
PDLIM5-212ENST00000509333 CDY1Q9Y6F8 540 aa17.5■□□□□ 0.39
PDLIM5-212ENST00000509333 VWA8A3KMH1 1905 aa17.5■□□□□ 0.39
PDLIM5-212ENST00000509333 MTCL1Q9Y4B5 1905 aaKnown RBP17.49■□□□□ 0.39
PDLIM5-212ENST00000509333 ABLIM3O94929 683 aa17.49■□□□□ 0.39
PDLIM5-212ENST00000509333 OAZ2O95190 189 aa17.49■□□□□ 0.39
PDLIM5-212ENST00000509333 IL18RAPO95256 599 aa17.49■□□□□ 0.39
PDLIM5-212ENST00000509333 ALADP13716 330 aa17.49■□□□□ 0.39
PDLIM5-212ENST00000509333 MCM4P33991 863 aa17.49■□□□□ 0.39
PDLIM5-212ENST00000509333 STK4Q13043 487 aa17.49■□□□□ 0.39
PDLIM5-212ENST00000509333 UVSSAQ2YD98 709 aa17.49■□□□□ 0.39
PDLIM5-212ENST00000509333 SLC8B1Q6J4K2 584 aa17.49■□□□□ 0.39
PDLIM5-212ENST00000509333 ELMSAN1Q6PJG2 1045 aa17.49■□□□□ 0.39
PDLIM5-212ENST00000509333 NT5DC4Q86YG4 428 aa17.49■□□□□ 0.39
PDLIM5-212ENST00000509333 EFCAB13Q8IY85 973 aa17.49■□□□□ 0.39
PDLIM5-212ENST00000509333 FSIP1Q8NA03 581 aa17.49■□□□□ 0.39
PDLIM5-212ENST00000509333 APPL2Q8NEU8 664 aa17.49■□□□□ 0.39
PDLIM5-212ENST00000509333 ZNF461Q8TAF7 563 aa17.49■□□□□ 0.39
PDLIM5-212ENST00000509333 BORCS6Q96GS4 357 aa17.49■□□□□ 0.39
PDLIM5-212ENST00000509333 PRKD2Q9BZL6 878 aa17.49■□□□□ 0.39
PDLIM5-212ENST00000509333 DPP3Q9NY33 737 aa17.49■□□□□ 0.39
PDLIM5-212ENST00000509333 FBXW11Q9UKB1 542 aa17.49■□□□□ 0.39
PDLIM5-212ENST00000509333 USTQ9Y2C2 406 aa17.49■□□□□ 0.39
PDLIM5-212ENST00000509333 H7C4K7 107 aa17.48■□□□□ 0.39
PDLIM5-212ENST00000509333 KIAA0391O15091 583 aaKnown RBP17.48■□□□□ 0.39
PDLIM5-212ENST00000509333 SPTLC1O15269 473 aa17.48■□□□□ 0.39
PDLIM5-212ENST00000509333 ZNF202O95125 648 aa17.48■□□□□ 0.39
PDLIM5-212ENST00000509333 PAX3P23760 479 aa17.48■□□□□ 0.39
PDLIM5-212ENST00000509333 SNRPFP62306 86 aaKnown RBP17.48■□□□□ 0.39
PDLIM5-212ENST00000509333 PSMD2Q13200 908 aa17.48■□□□□ 0.39
PDLIM5-212ENST00000509333 BMT2Q1RMZ1 405 aa17.48■□□□□ 0.39
PDLIM5-212ENST00000509333 KMT5BQ4FZB7 885 aa17.48■□□□□ 0.39
PDLIM5-212ENST00000509333 SCARA3Q6AZY7 606 aa17.48■□□□□ 0.39
PDLIM5-212ENST00000509333 BRSK2Q8IWQ3 736 aa17.48■□□□□ 0.39
PDLIM5-212ENST00000509333 GPD1LQ8N335 351 aa17.48■□□□□ 0.39
PDLIM5-212ENST00000509333 GOLPH3LQ9H4A5 285 aa17.48■□□□□ 0.39
PDLIM5-212ENST00000509333 WDR6Q9NNW5 1121 aaKnown RBP17.48■□□□□ 0.39
PDLIM5-212ENST00000509333 ZDHHC7Q9NXF8 308 aa17.48■□□□□ 0.39
PDLIM5-212ENST00000509333 FBXL5Q9UKA1 691 aa17.48■□□□□ 0.39
PDLIM5-212ENST00000509333 TIMM13Q9Y5L4 95 aaPredicted RBP17.48■□□□□ 0.39
PDLIM5-212ENST00000509333 SPDYE4A6NLX3 237 aa17.47■□□□□ 0.39
PDLIM5-212ENST00000509333 C2CD4DB7Z1M9 353 aa17.47■□□□□ 0.39
PDLIM5-212ENST00000509333 DCXO43602 365 aa17.47■□□□□ 0.39
PDLIM5-212ENST00000509333 MYL1P05976 194 aa17.47■□□□□ 0.39
PDLIM5-212ENST00000509333 ARMCX5Q6P1M9 558 aa17.47■□□□□ 0.39
PDLIM5-212ENST00000509333 KRBA2Q6ZNG9 492 aa17.47■□□□□ 0.39
PDLIM5-212ENST00000509333 RTL10Q7L3V2 364 aa17.47■□□□□ 0.39
PDLIM5-212ENST00000509333 SMG7Q92540 1137 aaKnown RBP17.47■□□□□ 0.39
PDLIM5-212ENST00000509333 SENP8Q96LD8 212 aa17.47■□□□□ 0.39
PDLIM5-212ENST00000509333 C1QTNF1Q9BXJ1 281 aa17.47■□□□□ 0.39
PDLIM5-212ENST00000509333 C11orf16Q9NQ32 467 aa17.47■□□□□ 0.39
PDLIM5-212ENST00000509333 HSPBP1Q9NZL4 362 aa17.47■□□□□ 0.39
PDLIM5-212ENST00000509333 MUTYHQ9UIF7 546 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms