RNA–Protein interactions for RNA: ENST00000509142.5

SEC31A-228, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SEC31A, Length 3,861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-228ENST00000509142 SLC40A1Q9NP59 571 aa11.68□□□□□ -0.54
SEC31A-228ENST00000509142 FGFR4P22455 802 aa11.67□□□□□ -0.54
SEC31A-228ENST00000509142 NOP14P78316 857 aaKnown RBP11.67□□□□□ -0.54
SEC31A-228ENST00000509142 ZBTB41Q5SVQ8 909 aa11.67□□□□□ -0.54
SEC31A-228ENST00000509142 SEPT1Q8WYJ6 367 aa11.67□□□□□ -0.54
SEC31A-228ENST00000509142 CCT6BQ92526 530 aa11.67□□□□□ -0.54
SEC31A-228ENST00000509142 XPO6Q96QU8 1125 aaKnown RBP11.67□□□□□ -0.54
SEC31A-228ENST00000509142 MPHOSPH6Q99547 160 aaKnown RBP11.67□□□□□ -0.54
SEC31A-228ENST00000509142 TRIM7Q9C029 511 aa11.67□□□□□ -0.54
SEC31A-228ENST00000509142 GRIN3BO60391 1043 aa11.67□□□□□ -0.54
SEC31A-228ENST00000509142 USP2O75604 605 aaPredicted RBP11.67□□□□□ -0.54
SEC31A-228ENST00000509142 TCF7P36402 384 aaPredicted RBP11.67□□□□□ -0.54
SEC31A-228ENST00000509142 MMP13P45452 471 aa11.67□□□□□ -0.54
SEC31A-228ENST00000509142 ENPEPQ07075 957 aa11.67□□□□□ -0.54
SEC31A-228ENST00000509142 NCOA4Q13772 614 aa11.67□□□□□ -0.54
SEC31A-228ENST00000509142 TTLL12Q14166 644 aaPredicted RBP11.67□□□□□ -0.54
SEC31A-228ENST00000509142 ZNF568Q3ZCX4 644 aa11.67□□□□□ -0.54
SEC31A-228ENST00000509142 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.67□□□□□ -0.544e-29■■■□□ 15.4
SEC31A-228ENST00000509142 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.67□□□□□ -0.54
SEC31A-228ENST00000509142 CNKSR2Q8WXI2 1034 aa11.67□□□□□ -0.54
SEC31A-228ENST00000509142 MRPL47Q9HD33 250 aaKnown RBP11.67□□□□□ -0.54
SEC31A-228ENST00000509142 CREB1P16220 341 aa11.67□□□□□ -0.54
SEC31A-228ENST00000509142 TBXAS1P24557 533 aaPredicted RBP11.67□□□□□ -0.54
SEC31A-228ENST00000509142 ARL2P36404 184 aa11.67□□□□□ -0.54
SEC31A-228ENST00000509142 CETN2P41208 172 aa11.67□□□□□ -0.54
SEC31A-228ENST00000509142 SLC1A1P43005 524 aa11.67□□□□□ -0.54
SEC31A-228ENST00000509142 LLGL2Q6P1M3 1020 aa11.67□□□□□ -0.54
SEC31A-228ENST00000509142 DLK2Q6UY11 383 aa11.67□□□□□ -0.54
SEC31A-228ENST00000509142 LBX2Q6XYB7 198 aa11.67□□□□□ -0.54
SEC31A-228ENST00000509142 SULF1Q8IWU6 871 aa11.67□□□□□ -0.54
SEC31A-228ENST00000509142 RBBP8NLQ8NC74 664 aaPredicted RBP11.67□□□□□ -0.54
SEC31A-228ENST00000509142 PRPF31Q8WWY3 499 aaKnown RBP11.67□□□□□ -0.54
SEC31A-228ENST00000509142 CABS1Q96KC9 395 aa11.67□□□□□ -0.54
SEC31A-228ENST00000509142 CCDC113Q9H0I3 377 aa11.67□□□□□ -0.54
SEC31A-228ENST00000509142 AVENQ9NQS1 362 aaPredicted RBP11.67□□□□□ -0.54
SEC31A-228ENST00000509142 AAASQ9NRG9 546 aa11.67□□□□□ -0.54
SEC31A-228ENST00000509142 FER1L6Q2WGJ9 1857 aa11.67□□□□□ -0.54
SEC31A-228ENST00000509142 UNGP13051 313 aaPredicted RBP11.66□□□□□ -0.54
SEC31A-228ENST00000509142 SLCO1A2P46721 670 aa11.66□□□□□ -0.54
SEC31A-228ENST00000509142 HIRAP54198 1017 aaPredicted RBP11.66□□□□□ -0.54
SEC31A-228ENST00000509142 WNT7BP56706 349 aa11.66□□□□□ -0.54
SEC31A-228ENST00000509142 TNFAIP8L3Q5GJ75 292 aa11.66□□□□□ -0.54
SEC31A-228ENST00000509142 NOL9Q5SY16 702 aaKnown RBP11.66□□□□□ -0.54
SEC31A-228ENST00000509142 C15orf39Q6ZRI6 1047 aa11.66□□□□□ -0.54
SEC31A-228ENST00000509142 DCPSQ96C86 337 aaKnown RBP11.66□□□□□ -0.54
SEC31A-228ENST00000509142 CGRRF1Q99675 332 aa11.66□□□□□ -0.54
SEC31A-228ENST00000509142 HEMGNQ9BXL5 484 aa11.66□□□□□ -0.54
SEC31A-228ENST00000509142 FAM129AQ9BZQ8 928 aa11.66□□□□□ -0.54
SEC31A-228ENST00000509142 BTBD7Q9P203 1132 aa11.66□□□□□ -0.54
SEC31A-228ENST00000509142 PHIPQ8WWQ0 1821 aa11.66□□□□□ -0.54
SEC31A-228ENST00000509142 GSTTP1A0A1W2PQM5 241 aa11.66□□□□□ -0.54
SEC31A-228ENST00000509142 ATG7O95352 703 aa11.66□□□□□ -0.54
SEC31A-228ENST00000509142 TRPC3Q13507 836 aa11.66□□□□□ -0.54
SEC31A-228ENST00000509142 SLMAPQ14BN4 828 aa11.66□□□□□ -0.54
SEC31A-228ENST00000509142 TRIM72Q6ZMU5 477 aa11.66□□□□□ -0.54
SEC31A-228ENST00000509142 MICALCLQ6ZW33 695 aa11.66□□□□□ -0.54
SEC31A-228ENST00000509142 ZBTB8OSQ8IWT0 167 aa11.66□□□□□ -0.54
SEC31A-228ENST00000509142 OR5B17Q8NGF7 314 aa11.66□□□□□ -0.54
SEC31A-228ENST00000509142 OTUD5Q96G74 571 aa11.66□□□□□ -0.54
SEC31A-228ENST00000509142 SELENOSQ9BQE4 189 aa11.66□□□□□ -0.54
SEC31A-228ENST00000509142 NIFKQ9BYG3 293 aaKnown RBP11.66□□□□□ -0.54
SEC31A-228ENST00000509142 SPATC1LQ9H0A9 340 aa11.66□□□□□ -0.54
SEC31A-228ENST00000509142 DOCK1Q14185 1865 aa11.66□□□□□ -0.54
SEC31A-228ENST00000509142 A0A0B4J269 797 aa11.66□□□□□ -0.54
SEC31A-228ENST00000509142 RGS16O15492 202 aaPredicted RBP11.66□□□□□ -0.54
SEC31A-228ENST00000509142 ADCY3O60266 1144 aa11.66□□□□□ -0.54
SEC31A-228ENST00000509142 FARP2O94887 1054 aaPredicted RBP11.66□□□□□ -0.54
SEC31A-228ENST00000509142 VNN1O95497 513 aa11.66□□□□□ -0.54
SEC31A-228ENST00000509142 GAS8O95995 478 aa11.66□□□□□ -0.54
SEC31A-228ENST00000509142 CLTAP09496 248 aa11.66□□□□□ -0.54
SEC31A-228ENST00000509142 CD58P19256 250 aa11.66□□□□□ -0.54
SEC31A-228ENST00000509142 CAPSQ13938 189 aa11.66□□□□□ -0.54
SEC31A-228ENST00000509142 TRIP13Q15645 432 aaPredicted RBP11.66□□□□□ -0.54
SEC31A-228ENST00000509142 LY6KQ17RY6 165 aa11.66□□□□□ -0.54
SEC31A-228ENST00000509142 CRELD2Q6UXH1 353 aaPredicted RBP11.66□□□□□ -0.54
SEC31A-228ENST00000509142 RIOX2Q8IUF8 465 aa11.66□□□□□ -0.54
SEC31A-228ENST00000509142 GPC2Q8N158 579 aa11.66□□□□□ -0.54
SEC31A-228ENST00000509142 MRPL4Q9BYD3 311 aaKnown RBP11.66□□□□□ -0.54
SEC31A-228ENST00000509142 MAF1Q9H063 256 aa11.66□□□□□ -0.54
SEC31A-228ENST00000509142 KLC4Q9NSK0 619 aa11.66□□□□□ -0.54
SEC31A-228ENST00000509142 HAUS2Q9NVX0 235 aa11.66□□□□□ -0.54
SEC31A-228ENST00000509142 STYXL1Q9Y6J8 313 aa11.66□□□□□ -0.54
SEC31A-228ENST00000509142 PTPRJQ12913 1337 aa11.65□□□□□ -0.54
SEC31A-228ENST00000509142 H0YHG0 523 aa11.65□□□□□ -0.54
SEC31A-228ENST00000509142 SCTRP47872 440 aa11.65□□□□□ -0.54
SEC31A-228ENST00000509142 VPS41P49754 854 aa11.65□□□□□ -0.54
SEC31A-228ENST00000509142 MNAT1P51948 309 aa11.65□□□□□ -0.54
SEC31A-228ENST00000509142 MCCD1P59942 119 aaPredicted RBP11.65□□□□□ -0.54
SEC31A-228ENST00000509142 KRT17Q04695 432 aa11.65□□□□□ -0.54
SEC31A-228ENST00000509142 CCDC38Q502W7 563 aa11.65□□□□□ -0.54
SEC31A-228ENST00000509142 ZNF394Q53GI3 561 aa11.65□□□□□ -0.54
SEC31A-228ENST00000509142 SH3D19Q5HYK7 790 aa11.65□□□□□ -0.54
SEC31A-228ENST00000509142 ABRAQ8N0Z2 381 aa11.65□□□□□ -0.54
SEC31A-228ENST00000509142 PGM2Q96G03 612 aa11.65□□□□□ -0.54
SEC31A-228ENST00000509142 APOBEC3GQ9HC16 384 aaKnown RBP11.65□□□□□ -0.54
SEC31A-228ENST00000509142 SNCAIPQ9Y6H5 919 aa11.65□□□□□ -0.54
SEC31A-228ENST00000509142 DOCK5Q9H7D0 1870 aa11.65□□□□□ -0.54
SEC31A-228ENST00000509142 COL11A1P12107 1806 aaPredicted RBP11.65□□□□□ -0.54
SEC31A-228ENST00000509142 TLR3O15455 904 aaKnown RBP11.65□□□□□ -0.54
SEC31A-228ENST00000509142 ATP2C2O75185 946 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms