RNA–Protein interactions for RNA: ENST00000509109.5

CCSER1-208, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 1,070 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-208ENST00000509109 NONOQ15233 471 aaKnown RBP eCLIP8.33□□□□□ -1.08
CCSER1-208ENST00000509109 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.33□□□□□ -1.08
CCSER1-208ENST00000509109 TMEM31Q5JXX7 168 aa8.33□□□□□ -1.08
CCSER1-208ENST00000509109 HP1BP3Q5SSJ5 553 aaPredicted RBP8.33□□□□□ -1.08
CCSER1-208ENST00000509109 EFCAB12Q6NXP0 572 aa8.33□□□□□ -1.08
CCSER1-208ENST00000509109 TRMT1LQ7Z2T5 733 aaKnown RBP8.33□□□□□ -1.08
CCSER1-208ENST00000509109 MIER3Q7Z3K6 550 aa8.33□□□□□ -1.08
CCSER1-208ENST00000509109 EXOC8Q8IYI6 725 aa8.33□□□□□ -1.08
CCSER1-208ENST00000509109 LRRC43Q8N309 656 aa8.33□□□□□ -1.08
CCSER1-208ENST00000509109 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.33□□□□□ -1.08
CCSER1-208ENST00000509109 TMEM40Q8WWA1 233 aa8.33□□□□□ -1.08
CCSER1-208ENST00000509109 WASF1Q92558 559 aa8.33□□□□□ -1.08
CCSER1-208ENST00000509109 BCO2Q9BYV7 579 aa8.33□□□□□ -1.08
CCSER1-208ENST00000509109 UPF3BQ9BZI7 483 aaKnown RBP8.33□□□□□ -1.08
CCSER1-208ENST00000509109 BRMS1Q9HCU9 246 aa8.33□□□□□ -1.08
CCSER1-208ENST00000509109 ALG13Q9NP73 1137 aaKnown RBP8.33□□□□□ -1.08
CCSER1-208ENST00000509109 PDRG1Q9NUG6 133 aa8.33□□□□□ -1.08
CCSER1-208ENST00000509109 FAM105AQ9NUU6 356 aa8.33□□□□□ -1.08
CCSER1-208ENST00000509109 DACT1Q9NYF0 836 aa8.33□□□□□ -1.08
CCSER1-208ENST00000509109 GPN3Q9UHW5 284 aaPredicted RBP8.33□□□□□ -1.08
CCSER1-208ENST00000509109 NOC2LQ9Y3T9 749 aaKnown RBP8.33□□□□□ -1.08
CCSER1-208ENST00000509109 ARID2Q68CP9 1835 aa8.32□□□□□ -1.08
CCSER1-208ENST00000509109 C9IYK1 514 aa8.32□□□□□ -1.08
CCSER1-208ENST00000509109 GPR32O75388 356 aa8.32□□□□□ -1.08
CCSER1-208ENST00000509109 CSPG5O95196 566 aa8.32□□□□□ -1.08
CCSER1-208ENST00000509109 TDP2O95551 362 aa8.32□□□□□ -1.08
CCSER1-208ENST00000509109 ITGB1P05556 798 aa8.32□□□□□ -1.08
CCSER1-208ENST00000509109 NFICP08651 508 aa8.32□□□□□ -1.08
CCSER1-208ENST00000509109 IL9P15248 144 aa8.32□□□□□ -1.08
CCSER1-208ENST00000509109 LIG1P18858 919 aa8.32□□□□□ -1.08
CCSER1-208ENST00000509109 SFPQP23246 707 aaKnown RBP eCLIP8.32□□□□□ -1.08
CCSER1-208ENST00000509109 MAPK8P45983 427 aa8.32□□□□□ -1.08
CCSER1-208ENST00000509109 NLRP11P59045 1033 aaKnown RBP8.32□□□□□ -1.08
CCSER1-208ENST00000509109 HYAL1Q12794 435 aa8.32□□□□□ -1.08
CCSER1-208ENST00000509109 STK3Q13188 491 aa8.32□□□□□ -1.08
CCSER1-208ENST00000509109 SMAD4Q13485 552 aaKnown RBP8.32□□□□□ -1.08
CCSER1-208ENST00000509109 XKR3Q5GH77 459 aa8.32□□□□□ -1.08
CCSER1-208ENST00000509109 NXPE4Q6UWF7 544 aa8.32□□□□□ -1.08
CCSER1-208ENST00000509109 RTN4RL1Q86UN2 441 aaPredicted RBP8.32□□□□□ -1.08
CCSER1-208ENST00000509109 FAM228AQ86W67 206 aa8.32□□□□□ -1.08
CCSER1-208ENST00000509109 ADHFE1Q8IWW8 467 aa8.32□□□□□ -1.08
CCSER1-208ENST00000509109 THNSL1Q8IYQ7 743 aa8.32□□□□□ -1.08
CCSER1-208ENST00000509109 POF1BQ8WVV4 589 aa8.32□□□□□ -1.08
CCSER1-208ENST00000509109 TBC1D32Q96NH3 1257 aa8.32□□□□□ -1.08
CCSER1-208ENST00000509109 UIMC1Q96RL1 719 aa8.32□□□□□ -1.08
CCSER1-208ENST00000509109 PPP1R16BQ96T49 567 aa8.32□□□□□ -1.08
CCSER1-208ENST00000509109 CDCA3Q99618 268 aaPredicted RBP8.32□□□□□ -1.08
CCSER1-208ENST00000509109 YIPF2Q9BWQ6 316 aa8.32□□□□□ -1.08
CCSER1-208ENST00000509109 MRPL9Q9BYD2 267 aaKnown RBP8.32□□□□□ -1.08
CCSER1-208ENST00000509109 GCOM2Q9BZD3 368 aaPredicted RBP8.32□□□□□ -1.08
CCSER1-208ENST00000509109 INO80BQ9C086 356 aaPredicted RBP8.32□□□□□ -1.08
CCSER1-208ENST00000509109 TMEM117Q9H0C3 514 aa8.32□□□□□ -1.08
CCSER1-208ENST00000509109 SLKQ9H2G2 1235 aaPredicted RBP8.32□□□□□ -1.08
CCSER1-208ENST00000509109 UNC45AQ9H3U1 944 aa8.32□□□□□ -1.08
CCSER1-208ENST00000509109 ZFYVE1Q9HBF4 777 aa8.32□□□□□ -1.08
CCSER1-208ENST00000509109 TLR9Q9NR96 1032 aa8.32□□□□□ -1.08
CCSER1-208ENST00000509109 DDX25Q9UHL0 483 aaKnown RBP8.32□□□□□ -1.08
CCSER1-208ENST00000509109 CD207Q9UJ71 328 aa8.32□□□□□ -1.08
CCSER1-208ENST00000509109 KIAA1324LA8MWY0 1029 aaPredicted RBP8.31□□□□□ -1.08
CCSER1-208ENST00000509109 TBX3O15119 743 aa8.31□□□□□ -1.08
CCSER1-208ENST00000509109 ZNF862O60290 1169 aa8.31□□□□□ -1.08
CCSER1-208ENST00000509109 MARCH6O60337 910 aa8.31□□□□□ -1.08
CCSER1-208ENST00000509109 MGEA5O60502 916 aa8.31□□□□□ -1.08
CCSER1-208ENST00000509109 PSMD10O75832 226 aa8.31□□□□□ -1.08
CCSER1-208ENST00000509109 DARSP14868 501 aaKnown RBP8.31□□□□□ -1.08
CCSER1-208ENST00000509109 ADMP35318 185 aa8.31□□□□□ -1.08
CCSER1-208ENST00000509109 ASPAP45381 313 aa8.31□□□□□ -1.08
CCSER1-208ENST00000509109 GPC3P51654 580 aa8.31□□□□□ -1.08
CCSER1-208ENST00000509109 PSMC5P62195 406 aa8.31□□□□□ -1.08
CCSER1-208ENST00000509109 ZP2Q05996 745 aa8.31□□□□□ -1.08
CCSER1-208ENST00000509109 BMS1Q14692 1282 aaKnown RBP8.31□□□□□ -1.08
CCSER1-208ENST00000509109 SMAD2Q15796 467 aaKnown RBP8.31□□□□□ -1.08
CCSER1-208ENST00000509109 ENOX2Q16206 610 aaKnown RBP8.31□□□□□ -1.08
CCSER1-208ENST00000509109 UGCGQ16739 394 aa8.31□□□□□ -1.08
CCSER1-208ENST00000509109 LETM2Q2VYF4 491 aa8.31□□□□□ -1.08
CCSER1-208ENST00000509109 MTERF2Q49AM1 385 aa8.31□□□□□ -1.08
CCSER1-208ENST00000509109 RPS26P11Q5JNZ5 115 aaPredicted RBP8.31□□□□□ -1.08
CCSER1-208ENST00000509109 ERICH6BQ5W0A0 696 aa8.31□□□□□ -1.08
CCSER1-208ENST00000509109 NEK8Q86SG6 692 aa8.31□□□□□ -1.08
CCSER1-208ENST00000509109 ZNF410Q86VK4 478 aa8.31□□□□□ -1.08
CCSER1-208ENST00000509109 LRRC71Q8N4P6 559 aa8.31□□□□□ -1.08
CCSER1-208ENST00000509109 LINC01465Q8N7H1 131 aa8.31□□□□□ -1.08
CCSER1-208ENST00000509109 EFHBQ8N7U6 833 aa8.31□□□□□ -1.08
CCSER1-208ENST00000509109 ETNPPLQ8TBG4 499 aa8.31□□□□□ -1.08
CCSER1-208ENST00000509109 SPPL3Q8TCT6 385 aa8.31□□□□□ -1.08
CCSER1-208ENST00000509109 MICAL1Q8TDZ2 1067 aa8.31□□□□□ -1.08
CCSER1-208ENST00000509109 WDR89Q96FK6 387 aaPredicted RBP8.31□□□□□ -1.08
CCSER1-208ENST00000509109 FAM20AQ96MK3 541 aa8.31□□□□□ -1.08
CCSER1-208ENST00000509109 MBOAT7Q96N66 472 aa8.31□□□□□ -1.08
CCSER1-208ENST00000509109 OSBPL1AQ9BXW6 950 aa8.31□□□□□ -1.08
CCSER1-208ENST00000509109 CCDC86Q9H6F5 360 aaKnown RBP8.31□□□□□ -1.08
CCSER1-208ENST00000509109 TLE6Q9H808 572 aa8.31□□□□□ -1.08
CCSER1-208ENST00000509109 PPP4R2Q9NY27 417 aa8.31□□□□□ -1.08
CCSER1-208ENST00000509109 PUF60Q9UHX1 559 aaKnown RBP8.31□□□□□ -1.08
CCSER1-208ENST00000509109 LZTS1Q9Y250 596 aa8.31□□□□□ -1.08
CCSER1-208ENST00000509109 MUC6Q6W4X9 2439 aa8.3□□□□□ -1.08
CCSER1-208ENST00000509109 PRR33A8MZF0 331 aa8.3□□□□□ -1.08
CCSER1-208ENST00000509109 PI4K2BG5E9Z4 385 aa8.3□□□□□ -1.08
CCSER1-208ENST00000509109 ADAMTS3O15072 1205 aa8.3□□□□□ -1.08
CCSER1-208ENST00000509109 MBTPS2O43462 519 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms